RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 PTPN6P29350 595 aa3.95□□□□□ -1.78
LINC00254-201ENST00000563416 XCR1P46094 333 aa3.95□□□□□ -1.78
LINC00254-201ENST00000563416 SLC1A6P48664 564 aa3.95□□□□□ -1.78
LINC00254-201ENST00000563416 STXBP1P61764 594 aaKnown RBP3.95□□□□□ -1.78
LINC00254-201ENST00000563416 HERVK_113P63132 956 aa3.95□□□□□ -1.78
LINC00254-201ENST00000563416 SKP1P63208 163 aa3.95□□□□□ -1.78
LINC00254-201ENST00000563416 DHODHQ02127 395 aa3.95□□□□□ -1.78
LINC00254-201ENST00000563416 IRF8Q02556 426 aa3.95□□□□□ -1.78
LINC00254-201ENST00000563416 MFGE8Q08431 387 aaPredicted RBP3.95□□□□□ -1.78
LINC00254-201ENST00000563416 OR1C1Q15619 314 aa3.95□□□□□ -1.78
LINC00254-201ENST00000563416 TATDN3Q17R31 274 aa3.95□□□□□ -1.78
LINC00254-201ENST00000563416 LIPKQ5VXJ0 399 aa3.95□□□□□ -1.78
LINC00254-201ENST00000563416 MED27Q6P2C8 311 aa3.95□□□□□ -1.78
LINC00254-201ENST00000563416 NIPAL3Q6P499 406 aa3.95□□□□□ -1.78
LINC00254-201ENST00000563416 TMEM64Q6YI46 380 aa3.95□□□□□ -1.78
LINC00254-201ENST00000563416 ABHD13Q7L211 337 aa3.95□□□□□ -1.78
LINC00254-201ENST00000563416 GOLGA7Q7Z5G4 137 aa3.95□□□□□ -1.78
LINC00254-201ENST00000563416 HPS6Q86YV9 775 aa3.95□□□□□ -1.78
LINC00254-201ENST00000563416 GRAMD2AQ8IUY3 354 aa3.95□□□□□ -1.78
LINC00254-201ENST00000563416 SNX31Q8N9S9 440 aa3.95□□□□□ -1.78
LINC00254-201ENST00000563416 OR2L5Q8NG80 312 aa3.95□□□□□ -1.78
LINC00254-201ENST00000563416 OR11G2Q8NGC1 345 aa3.95□□□□□ -1.78
LINC00254-201ENST00000563416 OR5T3Q8NGG3 340 aa3.95□□□□□ -1.78
LINC00254-201ENST00000563416 OR51Q1Q8NH59 317 aa3.95□□□□□ -1.78
LINC00254-201ENST00000563416 UBE2E3Q969T4 207 aa3.95□□□□□ -1.78
LINC00254-201ENST00000563416 L3HYPDHQ96EM0 354 aa3.95□□□□□ -1.78
LINC00254-201ENST00000563416 TPD52L3Q96J77 140 aa3.95□□□□□ -1.78
LINC00254-201ENST00000563416 SECISBP2Q96T21 854 aaKnown RBP3.95□□□□□ -1.78
LINC00254-201ENST00000563416 OVOL2Q9BRP0 275 aa3.95□□□□□ -1.78
LINC00254-201ENST00000563416 TMEM109Q9BVC6 243 aa3.95□□□□□ -1.78
LINC00254-201ENST00000563416 ERVK-6Q9BXR3 956 aa3.95□□□□□ -1.78
LINC00254-201ENST00000563416 PARD6BQ9BYG5 372 aa3.95□□□□□ -1.78
LINC00254-201ENST00000563416 ROPN1BQ9BZX4 212 aaPredicted RBP3.95□□□□□ -1.78
LINC00254-201ENST00000563416 ING2Q9H160 280 aa3.95□□□□□ -1.78
LINC00254-201ENST00000563416 VCX2Q9H322 139 aa3.95□□□□□ -1.78
LINC00254-201ENST00000563416 EGLN3Q9H6Z9 239 aa3.95□□□□□ -1.78
LINC00254-201ENST00000563416 RDH8Q9NYR8 311 aa3.95□□□□□ -1.78
LINC00254-201ENST00000563416 DCDC2Q9UHG0 476 aa3.95□□□□□ -1.78
LINC00254-201ENST00000563416 C3orf18Q9UK00 162 aa3.95□□□□□ -1.78
LINC00254-201ENST00000563416 EMCNQ9ULC0 261 aa3.95□□□□□ -1.78
LINC00254-201ENST00000563416 DIMT1Q9UNQ2 313 aaKnown RBP3.95□□□□□ -1.78
LINC00254-201ENST00000563416 CAB39Q9Y376 341 aaPredicted RBP3.95□□□□□ -1.78
LINC00254-201ENST00000563416 CSAG2Q9Y5P2 127 aa3.95□□□□□ -1.78
LINC00254-201ENST00000563416 V9GYY5 206 aaPredicted RBP3.95□□□□□ -1.78
LINC00254-201ENST00000563416 NCOA6Q14686 2063 aaPredicted RBP3.94□□□□□ -1.78
LINC00254-201ENST00000563416 DIDO1Q9BTC0 2240 aaKnown RBP3.94□□□□□ -1.78
LINC00254-201ENST00000563416 PTPN13Q12923 2485 aa3.94□□□□□ -1.78
LINC00254-201ENST00000563416 IGKV3D-11A0A0A0MRZ8 115 aa3.94□□□□□ -1.78
LINC00254-201ENST00000563416 IGHV1-45A0A0A0MS14 117 aa3.94□□□□□ -1.78
LINC00254-201ENST00000563416 ZNF860A6NHJ4 632 aa3.94□□□□□ -1.78
LINC00254-201ENST00000563416 G3V2L1 256 aa3.94□□□□□ -1.78
LINC00254-201ENST00000563416 GOLGA8RI6L899 631 aa3.94□□□□□ -1.78
LINC00254-201ENST00000563416 K7EM74 188 aa3.94□□□□□ -1.78
LINC00254-201ENST00000563416 FOXE1O00358 373 aaPredicted RBP3.94□□□□□ -1.78
LINC00254-201ENST00000563416 PLPP1O14494 284 aa3.94□□□□□ -1.78
LINC00254-201ENST00000563416 ERI3O43414 337 aaKnown RBP3.94□□□□□ -1.78
LINC00254-201ENST00000563416 CHST10O43529 356 aa3.94□□□□□ -1.78
LINC00254-201ENST00000563416 PLIN3O60664 434 aa3.94□□□□□ -1.78
LINC00254-201ENST00000563416 DNAJB6O75190 326 aa3.94□□□□□ -1.78
LINC00254-201ENST00000563416 ALOX12BO75342 701 aa3.94□□□□□ -1.78
LINC00254-201ENST00000563416 SEMA3DO95025 777 aa3.94□□□□□ -1.78
LINC00254-201ENST00000563416 CLDN9O95484 217 aa3.94□□□□□ -1.78
LINC00254-201ENST00000563416 HPP00738 406 aa3.94□□□□□ -1.78
LINC00254-201ENST00000563416 HPRP00739 348 aa3.94□□□□□ -1.78
LINC00254-201ENST00000563416 PRB1P04280 392 aa3.94□□□□□ -1.78
LINC00254-201ENST00000563416 SERPIND1P05546 499 aa3.94□□□□□ -1.78
LINC00254-201ENST00000563416 FHP07954 510 aa3.94□□□□□ -1.78
LINC00254-201ENST00000563416 RNH1P13489 461 aaKnown RBP3.94□□□□□ -1.78
LINC00254-201ENST00000563416 TAC1P20366 129 aa3.94□□□□□ -1.78
LINC00254-201ENST00000563416 IMPDH1P20839 514 aa3.94□□□□□ -1.78
LINC00254-201ENST00000563416 CHI3L1P36222 383 aaPredicted RBP3.94□□□□□ -1.78
LINC00254-201ENST00000563416 PTGFRP43088 359 aa3.94□□□□□ -1.78
LINC00254-201ENST00000563416 SLCO1A2P46721 670 aa3.94□□□□□ -1.78
LINC00254-201ENST00000563416 EMP2P54851 167 aa3.94□□□□□ -1.78
LINC00254-201ENST00000563416 RAB38P57729 211 aa3.94□□□□□ -1.78
LINC00254-201ENST00000563416 RAB8AP61006 207 aa3.94□□□□□ -1.78
LINC00254-201ENST00000563416 PAX8Q06710 450 aa3.94□□□□□ -1.78
LINC00254-201ENST00000563416 RIGQ13278 110 aa3.94□□□□□ -1.78
LINC00254-201ENST00000563416 ZSWIM7Q19AV6 140 aa3.94□□□□□ -1.78
LINC00254-201ENST00000563416 CCDC153Q494R4 210 aa3.94□□□□□ -1.78
LINC00254-201ENST00000563416 DEFB134Q4QY38 66 aa3.94□□□□□ -1.78
LINC00254-201ENST00000563416 UNC50Q53HI1 259 aa3.94□□□□□ -1.78
LINC00254-201ENST00000563416 TNFAIP8L3Q5GJ75 292 aa3.94□□□□□ -1.78
LINC00254-201ENST00000563416 ZNF678Q5SXM1 525 aa3.94□□□□□ -1.78
LINC00254-201ENST00000563416 KHDRBS2Q5VWX1 349 aaKnown RBP3.94□□□□□ -1.78
LINC00254-201ENST00000563416 SPINK14Q6IE38 97 aa3.94□□□□□ -1.78
LINC00254-201ENST00000563416 ZNF343Q6P1L6 599 aa3.94□□□□□ -1.78
LINC00254-201ENST00000563416 TRIM40Q6P9F5 258 aa3.94□□□□□ -1.78
LINC00254-201ENST00000563416 CBLN3Q6UW01 205 aa3.94□□□□□ -1.78
LINC00254-201ENST00000563416 IGFL2Q6UWQ7 119 aa3.94□□□□□ -1.78
LINC00254-201ENST00000563416 IGFL3Q6UXB1 125 aa3.94□□□□□ -1.78
LINC00254-201ENST00000563416 SHISA6Q6ZSJ9 500 aa3.94□□□□□ -1.78
LINC00254-201ENST00000563416 ERASQ7Z444 233 aa3.94□□□□□ -1.78
LINC00254-201ENST00000563416 SLC22A9Q8IVM8 553 aa3.94□□□□□ -1.78
LINC00254-201ENST00000563416 CA13Q8N1Q1 262 aa3.94□□□□□ -1.78
LINC00254-201ENST00000563416 TCEANCQ8N8B7 351 aa3.94□□□□□ -1.78
LINC00254-201ENST00000563416 CCDC197Q8NCU1 140 aa3.94□□□□□ -1.78
LINC00254-201ENST00000563416 PLPP5Q8NEB5 264 aa3.94□□□□□ -1.78
LINC00254-201ENST00000563416 FDCSPQ8NFU4 85 aa3.94□□□□□ -1.78
LINC00254-201ENST00000563416 OR4F6Q8NGB9 312 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms