RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 RPRD1BQ9NQG5 326 aaKnown RBP14.26□□□□□ -0.13
CDT1-202ENST00000562747 B9D1Q9UPM9 204 aa14.26□□□□□ -0.13
CDT1-202ENST00000562747 FKBP7Q9Y680 259 aa14.26□□□□□ -0.13
CDT1-202ENST00000562747 OR6C68A6NDL8 312 aa14.25□□□□□ -0.13
CDT1-202ENST00000562747 DCTN6O00399 190 aa14.25□□□□□ -0.13
CDT1-202ENST00000562747 EBAG9O00559 213 aa14.25□□□□□ -0.13
CDT1-202ENST00000562747 GPRIN2O60269 458 aa14.25□□□□□ -0.13
CDT1-202ENST00000562747 CIB2O75838 187 aa14.25□□□□□ -0.13
CDT1-202ENST00000562747 SOX14O95416 240 aa14.25□□□□□ -0.13
CDT1-202ENST00000562747 COX5BP10606 129 aa14.25□□□□□ -0.13
CDT1-202ENST00000562747 CCL2P13500 99 aa14.25□□□□□ -0.13
CDT1-202ENST00000562747 ANXA8P13928 327 aa14.25□□□□□ -0.13
CDT1-202ENST00000562747 RAD52P43351 418 aa14.25□□□□□ -0.13
CDT1-202ENST00000562747 PPOXP50336 477 aa14.25□□□□□ -0.13
CDT1-202ENST00000562747 GLO1Q04760 184 aa14.25□□□□□ -0.13
CDT1-202ENST00000562747 PAQR4Q8N4S7 273 aaPredicted RBP14.25□□□□□ -0.13
CDT1-202ENST00000562747 C11orf40Q8WZ69 217 aa14.25□□□□□ -0.13
CDT1-202ENST00000562747 UTP4Q969X6 686 aaKnown RBP14.25□□□□□ -0.13
CDT1-202ENST00000562747 NRBF2Q96F24 287 aa14.25□□□□□ -0.13
CDT1-202ENST00000562747 DUS3LQ96G46 650 aaKnown RBP14.25□□□□□ -0.13
CDT1-202ENST00000562747 POM121L2Q96KW2 1035 aa14.25□□□□□ -0.13
CDT1-202ENST00000562747 DOK1Q99704 481 aa14.25□□□□□ -0.13
CDT1-202ENST00000562747 BCL2L14Q9BZR8 327 aa14.25□□□□□ -0.13
CDT1-202ENST00000562747 ZNF556Q9HAH1 456 aa14.25□□□□□ -0.13
CDT1-202ENST00000562747 SRA1Q9HD15 236 aaKnown RBP14.25□□□□□ -0.13
CDT1-202ENST00000562747 ARMC1Q9NVT9 282 aa14.25□□□□□ -0.13
CDT1-202ENST00000562747 A0A096LNT2 108 aa14.24□□□□□ -0.13
CDT1-202ENST00000562747 TMEM129A0AVI4 362 aa14.24□□□□□ -0.13
CDT1-202ENST00000562747 TLX2O43763 284 aaPredicted RBP14.24□□□□□ -0.13
CDT1-202ENST00000562747 TIPRLO75663 272 aa14.24□□□□□ -0.13
CDT1-202ENST00000562747 MPZL1O95297 269 aa14.24□□□□□ -0.13
CDT1-202ENST00000562747 IGFBP1P08833 259 aaPredicted RBP14.24□□□□□ -0.13
CDT1-202ENST00000562747 GAAP10253 952 aa14.24□□□□□ -0.13
CDT1-202ENST00000562747 CENPAP49450 140 aa14.24□□□□□ -0.13
CDT1-202ENST00000562747 GDI2P50395 445 aaKnown RBP14.24□□□□□ -0.13
CDT1-202ENST00000562747 NUDT6P53370 316 aa14.24□□□□□ -0.13
CDT1-202ENST00000562747 UCP2P55851 309 aa14.24□□□□□ -0.13
CDT1-202ENST00000562747 ZNF774Q6NX45 483 aa14.24□□□□□ -0.13
CDT1-202ENST00000562747 SHQ1Q6PI26 577 aaKnown RBP14.24□□□□□ -0.13
CDT1-202ENST00000562747 UNQ6126/PRO20091Q6UXV3 157 aa14.24□□□□□ -0.13
CDT1-202ENST00000562747 SVOPLQ8N434 492 aa14.24□□□□□ -0.13
CDT1-202ENST00000562747 TEX47Q8TBZ9 253 aa14.24□□□□□ -0.13
CDT1-202ENST00000562747 DDOQ99489 341 aa14.24□□□□□ -0.13
CDT1-202ENST00000562747 NTN4Q9HB63 628 aa14.24□□□□□ -0.13
CDT1-202ENST00000562747 REV1Q9UBZ9 1251 aa14.24□□□□□ -0.13
CDT1-202ENST00000562747 KLHL21Q9UJP4 597 aa14.24□□□□□ -0.13
CDT1-202ENST00000562747 NDRG4Q9ULP0 352 aaKnown RBP14.24□□□□□ -0.13
CDT1-202ENST00000562747 ARFGEF3Q5TH69 2177 aa14.23□□□□□ -0.13
CDT1-202ENST00000562747 LOC100509620A0A075B734 347 aa14.23□□□□□ -0.13
CDT1-202ENST00000562747 C5orf49A4QMS7 147 aa14.23□□□□□ -0.13
CDT1-202ENST00000562747 SGCEO43556 437 aa14.23□□□□□ -0.13
CDT1-202ENST00000562747 FAM157BP0CG42 384 aa14.23□□□□□ -0.13
CDT1-202ENST00000562747 CCNOP22674 350 aa14.23□□□□□ -0.13
CDT1-202ENST00000562747 EFNA4P52798 201 aa14.23□□□□□ -0.13
CDT1-202ENST00000562747 CCNIQ14094 377 aa14.23□□□□□ -0.13
CDT1-202ENST00000562747 MSMPQ1L6U9 139 aa14.23□□□□□ -0.13
CDT1-202ENST00000562747 SLC36A3Q495N2 470 aa14.23□□□□□ -0.13
CDT1-202ENST00000562747 ZNF362Q5T0B9 420 aaPredicted RBP14.23□□□□□ -0.13
CDT1-202ENST00000562747 RGS7BPQ6MZT1 257 aaPredicted RBP14.23□□□□□ -0.13
CDT1-202ENST00000562747 C1orf174Q8IYL3 243 aa14.23□□□□□ -0.13
CDT1-202ENST00000562747 HS3ST5Q8IZT8 346 aa14.23□□□□□ -0.13
CDT1-202ENST00000562747 SLC37A3Q8NCC5 494 aa14.23□□□□□ -0.13
CDT1-202ENST00000562747 SLC26A10Q8NG04 563 aa14.23□□□□□ -0.13
CDT1-202ENST00000562747 OR4Q3Q8NH05 313 aa14.23□□□□□ -0.13
CDT1-202ENST00000562747 DNAJC9Q8WXX5 260 aa14.23□□□□□ -0.13
CDT1-202ENST00000562747 MRPL37Q9BZE1 423 aaKnown RBP14.23□□□□□ -0.13
CDT1-202ENST00000562747 FN3KQ9H479 309 aa14.23□□□□□ -0.13
CDT1-202ENST00000562747 ASH2LQ9UBL3 628 aa14.23□□□□□ -0.13
CDT1-202ENST00000562747 EIF3KQ9UBQ5 218 aaKnown RBP14.23□□□□□ -0.13
CDT1-202ENST00000562747 POLR1DQ9Y2S0 133 aa14.23□□□□□ -0.13
CDT1-202ENST00000562747 AP4S1Q9Y587 144 aa14.23□□□□□ -0.13
CDT1-202ENST00000562747 ANK2Q01484 3957 aa14.23□□□□□ -0.13
CDT1-202ENST00000562747 H3BN98 237 aa14.22□□□□□ -0.13
CDT1-202ENST00000562747 SSX4O60224 188 aa14.22□□□□□ -0.13
CDT1-202ENST00000562747 DOK2O60496 412 aa14.22□□□□□ -0.13
CDT1-202ENST00000562747 ICMTO60725 284 aa14.22□□□□□ -0.13
CDT1-202ENST00000562747 F12P00748 615 aaPredicted RBP14.22□□□□□ -0.13
CDT1-202ENST00000562747 IFNGP01579 166 aa14.22□□□□□ -0.13
CDT1-202ENST00000562747 FCGR1AP12314 374 aa14.22□□□□□ -0.13
CDT1-202ENST00000562747 OSMP13725 252 aa14.22□□□□□ -0.13
CDT1-202ENST00000562747 PRKACGP22612 351 aa14.22□□□□□ -0.13
CDT1-202ENST00000562747 FASP25445 335 aa14.22□□□□□ -0.13
CDT1-202ENST00000562747 DSCR9P59020 149 aa14.22□□□□□ -0.13
CDT1-202ENST00000562747 TEKQ02763 1124 aa14.22□□□□□ -0.13
CDT1-202ENST00000562747 ATP6AP1Q15904 470 aa14.22□□□□□ -0.13
CDT1-202ENST00000562747 VASH1Q7L8A9 365 aaPredicted RBP14.22□□□□□ -0.13
CDT1-202ENST00000562747 ATG16L2Q8NAA4 619 aa14.22□□□□□ -0.13
CDT1-202ENST00000562747 CYB561A3Q8NBI2 242 aa14.22□□□□□ -0.13
CDT1-202ENST00000562747 GJC3Q8NFK1 279 aa14.22□□□□□ -0.13
CDT1-202ENST00000562747 OR10H5Q8NGA6 315 aa14.22□□□□□ -0.13
CDT1-202ENST00000562747 OR2T4Q8NH00 348 aa14.22□□□□□ -0.13
CDT1-202ENST00000562747 OR5K1Q8NHB7 308 aa14.22□□□□□ -0.13
CDT1-202ENST00000562747 SORCS2Q96PQ0 1159 aa14.22□□□□□ -0.13
CDT1-202ENST00000562747 RBM4Q9BWF3 364 aaKnown RBP14.22□□□□□ -0.13
CDT1-202ENST00000562747 RAB1BQ9H0U4 201 aa14.22□□□□□ -0.13
CDT1-202ENST00000562747 PLEK2Q9NYT0 353 aa14.22□□□□□ -0.13
CDT1-202ENST00000562747 ATPIF1Q9UII2 106 aa14.22□□□□□ -0.13
CDT1-202ENST00000562747 IGHV4-30-2A0A087WSY4 118 aa14.21□□□□□ -0.13
CDT1-202ENST00000562747 A8MV72 311 aaPredicted RBP14.21□□□□□ -0.13
CDT1-202ENST00000562747 SYNGR3O43761 229 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms