RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 ZFP36L2P47974 494 aaKnown RBP6.83□□□□□ -1.32
TCF4-216ENST00000562680 MFAP5Q13361 173 aa6.83□□□□□ -1.32
TCF4-216ENST00000562680 ABCA11PQ4W5N1 156 aa6.83□□□□□ -1.32
TCF4-216ENST00000562680 ATPAF1Q5TC12 328 aaPredicted RBP6.83□□□□□ -1.32
TCF4-216ENST00000562680 OR2G6Q5TZ20 316 aa6.83□□□□□ -1.32
TCF4-216ENST00000562680 OR2A2Q6IF42 318 aa6.83□□□□□ -1.32
TCF4-216ENST00000562680 YIPF5Q969M3 257 aa6.83□□□□□ -1.32
TCF4-216ENST00000562680 MED20Q9H944 212 aa6.83□□□□□ -1.32
TCF4-216ENST00000562680 ZNF346Q9UL40 294 aaKnown RBP6.83□□□□□ -1.32
TCF4-216ENST00000562680 C19orf67A6NJJ6 358 aa6.83□□□□□ -1.32
TCF4-216ENST00000562680 DBX1A6NMT0 343 aa6.83□□□□□ -1.32
TCF4-216ENST00000562680 OPN1LWP04000 364 aa6.83□□□□□ -1.32
TCF4-216ENST00000562680 CSF2RBP32927 897 aa6.83□□□□□ -1.32
TCF4-216ENST00000562680 MAP2K3P46734 347 aa6.83□□□□□ -1.32
TCF4-216ENST00000562680 ATP1B3P54709 279 aa6.83□□□□□ -1.32
TCF4-216ENST00000562680 RAC1P63000 192 aa6.83□□□□□ -1.32
TCF4-216ENST00000562680 CDK5Q00535 292 aa6.83□□□□□ -1.32
TCF4-216ENST00000562680 LIPNQ5VXI9 398 aa6.83□□□□□ -1.32
TCF4-216ENST00000562680 LRRC28Q86X40 367 aaPredicted RBP6.83□□□□□ -1.32
TCF4-216ENST00000562680 Q8N402 240 aa6.83□□□□□ -1.32
TCF4-216ENST00000562680 ZFAND1Q8TCF1 268 aa6.83□□□□□ -1.32
TCF4-216ENST00000562680 FAM71F1Q96KD3 344 aaPredicted RBP6.83□□□□□ -1.32
TCF4-216ENST00000562680 RASL10BQ96S79 203 aa6.83□□□□□ -1.32
TCF4-216ENST00000562680 SPACA1Q9HBV2 294 aa6.83□□□□□ -1.32
TCF4-216ENST00000562680 NRIP3Q9NQ35 241 aa6.83□□□□□ -1.32
TCF4-216ENST00000562680 FSCN3Q9NQT6 498 aa6.83□□□□□ -1.32
TCF4-216ENST00000562680 MAN2C1Q9NTJ4 1040 aa6.83□□□□□ -1.32
TCF4-216ENST00000562680 LOC390937A0A1W2PQ73 354 aa6.83□□□□□ -1.32
TCF4-216ENST00000562680 FAM166BA8MTA8 275 aa6.83□□□□□ -1.32
TCF4-216ENST00000562680 PRRG2O14669 202 aa6.83□□□□□ -1.32
TCF4-216ENST00000562680 RAC2P15153 192 aa6.83□□□□□ -1.32
TCF4-216ENST00000562680 PGAM2P15259 253 aa6.83□□□□□ -1.32
TCF4-216ENST00000562680 HIST1H1CP16403 213 aaKnown RBP6.83□□□□□ -1.32
TCF4-216ENST00000562680 ZP3P21754 424 aa6.83□□□□□ -1.32
TCF4-216ENST00000562680 PITPNBP48739 271 aa6.83□□□□□ -1.32
TCF4-216ENST00000562680 DEFB109BQ30KR1 87 aa6.83□□□□□ -1.32
TCF4-216ENST00000562680 FAM199XQ6PEV8 388 aaPredicted RBP6.83□□□□□ -1.32
TCF4-216ENST00000562680 DCBLD2Q96PD2 775 aa6.83□□□□□ -1.32
TCF4-216ENST00000562680 ZNF226Q9NYT6 803 aa6.83□□□□□ -1.32
TCF4-216ENST00000562680 MIOXQ9UGB7 285 aa6.83□□□□□ -1.32
TCF4-216ENST00000562680 NUFIP1Q9UHK0 495 aaKnown RBP6.83□□□□□ -1.32
TCF4-216ENST00000562680 ICAM5Q9UMF0 924 aa6.83□□□□□ -1.32
TCF4-216ENST00000562680 WASF3Q9UPY6 502 aa6.83□□□□□ -1.32
TCF4-216ENST00000562680 EXO1Q9UQ84 846 aaKnown RBP6.83□□□□□ -1.32
TCF4-216ENST00000562680 BOLA1Q9Y3E2 137 aa6.83□□□□□ -1.32
TCF4-216ENST00000562680 OR2W5A6NFC9 320 aa6.83□□□□□ -1.32
TCF4-216ENST00000562680 MAS1P04201 325 aa6.83□□□□□ -1.32
TCF4-216ENST00000562680 CLEC3BP05452 202 aa6.83□□□□□ -1.32
TCF4-216ENST00000562680 LAP3P28838 519 aa6.83□□□□□ -1.32
TCF4-216ENST00000562680 ARL3P36405 182 aa6.83□□□□□ -1.32
TCF4-216ENST00000562680 PSMB10P40306 273 aa6.83□□□□□ -1.32
TCF4-216ENST00000562680 UCNP55089 124 aa6.83□□□□□ -1.32
TCF4-216ENST00000562680 HERV-K104P61576 105 aa6.83□□□□□ -1.32
TCF4-216ENST00000562680 RSU1Q15404 277 aa6.83□□□□□ -1.32
TCF4-216ENST00000562680 MEP1BQ16820 701 aa6.83□□□□□ -1.32
TCF4-216ENST00000562680 STEAP3Q658P3 488 aa6.83□□□□□ -1.32
TCF4-216ENST00000562680 ABLIM2Q6H8Q1 611 aa6.83□□□□□ -1.32
TCF4-216ENST00000562680 GALNT16Q8N428 558 aa6.83□□□□□ -1.32
TCF4-216ENST00000562680 STEAP2Q8NFT2 490 aa6.83□□□□□ -1.32
TCF4-216ENST00000562680 A0A1W2PQL4 384 aaPredicted RBP6.83□□□□□ -1.32
TCF4-216ENST00000562680 ZNF705EA8MWA4 302 aaPredicted RBP6.83□□□□□ -1.32
TCF4-216ENST00000562680 UBBP0CG47 229 aa6.83□□□□□ -1.32
TCF4-216ENST00000562680 TNFSF4P23510 183 aa6.83□□□□□ -1.32
TCF4-216ENST00000562680 POU3F4P49335 361 aa6.83□□□□□ -1.32
TCF4-216ENST00000562680 TAS2R60P59551 318 aa6.83□□□□□ -1.32
TCF4-216ENST00000562680 AWAT2Q6E213 333 aa6.83□□□□□ -1.32
TCF4-216ENST00000562680 PAQR6Q6TCH4 344 aa6.83□□□□□ -1.32
TCF4-216ENST00000562680 FAM198BQ6UWH4 519 aa6.83□□□□□ -1.32
TCF4-216ENST00000562680 ZNF511Q8NB15 262 aa6.83□□□□□ -1.32
TCF4-216ENST00000562680 ADPRHL1Q8NDY3 354 aa6.83□□□□□ -1.32
TCF4-216ENST00000562680 OR10G3Q8NGC4 313 aa6.83□□□□□ -1.32
TCF4-216ENST00000562680 GHSRQ92847 366 aa6.83□□□□□ -1.32
TCF4-216ENST00000562680 TAAR8Q969N4 342 aa6.83□□□□□ -1.32
TCF4-216ENST00000562680 ARSGQ96EG1 525 aa6.83□□□□□ -1.32
TCF4-216ENST00000562680 MICU1Q9BPX6 476 aa6.83□□□□□ -1.32
TCF4-216ENST00000562680 OR11A1Q9GZK7 315 aa6.83□□□□□ -1.32
TCF4-216ENST00000562680 ANKRD10Q9NXR5 420 aa6.83□□□□□ -1.32
TCF4-216ENST00000562680 MYEF2Q9P2K5 600 aaKnown RBP6.83□□□□□ -1.32
TCF4-216ENST00000562680 TBC1D24Q9ULP9 559 aa6.83□□□□□ -1.32
TCF4-216ENST00000562680 C14orf166Q9Y224 244 aaKnown RBP6.83□□□□□ -1.32
TCF4-216ENST00000562680 TRAPPC4Q9Y296 219 aa6.83□□□□□ -1.32
TCF4-216ENST00000562680 MTCL1Q9Y4B5 1905 aaKnown RBP6.83□□□□□ -1.32
TCF4-216ENST00000562680 MEIOCA2RUB1 952 aa6.82□□□□□ -1.32
TCF4-216ENST00000562680 TUBAL3A6NHL2 446 aa6.82□□□□□ -1.32
TCF4-216ENST00000562680 H7C1C5 153 aa6.82□□□□□ -1.32
TCF4-216ENST00000562680 FZD7O75084 574 aa6.82□□□□□ -1.32
TCF4-216ENST00000562680 SMIM18P0DKX4 95 aa6.82□□□□□ -1.32
TCF4-216ENST00000562680 CT45A8P0DMV1 189 aa6.82□□□□□ -1.32
TCF4-216ENST00000562680 CT45A9P0DMV2 189 aa6.82□□□□□ -1.32
TCF4-216ENST00000562680 TMEM225BP0DP42 221 aa6.82□□□□□ -1.32
TCF4-216ENST00000562680 CNR1P21554 472 aa6.82□□□□□ -1.32
TCF4-216ENST00000562680 LCN6P62502 163 aa6.82□□□□□ -1.32
TCF4-216ENST00000562680 TPBGQ13641 420 aa6.82□□□□□ -1.32
TCF4-216ENST00000562680 CTU2Q2VPK5 515 aaKnown RBP6.82□□□□□ -1.32
TCF4-216ENST00000562680 CT45A2Q5DJT8 189 aa6.82□□□□□ -1.32
TCF4-216ENST00000562680 MRGPREQ86SM8 312 aa6.82□□□□□ -1.32
TCF4-216ENST00000562680 SORCS2Q96PQ0 1159 aa6.82□□□□□ -1.32
TCF4-216ENST00000562680 ZNF275Q9NSD4 429 aaPredicted RBP6.82□□□□□ -1.32
TCF4-216ENST00000562680 ETV7Q9Y603 341 aa6.82□□□□□ -1.32
TCF4-216ENST00000562680 AHCTF1Q8WYP5 2266 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms