RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 TCTE3Q8IZS6 198 aa8.74□□□□□ -1.01
SMG1-205ENST00000561947 FCAMRQ8WWV6 532 aa8.74□□□□□ -1.01
SMG1-205ENST00000561947 AKAP1Q92667 903 aaKnown RBP eCLIP8.74□□□□□ -1.01
SMG1-205ENST00000561947 SLAMF6Q96DU3 332 aa8.74□□□□□ -1.01
SMG1-205ENST00000561947 CENPMQ9NSP4 180 aa8.74□□□□□ -1.01
SMG1-205ENST00000561947 TAS2R4Q9NYW5 299 aa8.74□□□□□ -1.01
SMG1-205ENST00000561947 CKLFQ9UBR5 152 aa8.74□□□□□ -1.01
SMG1-205ENST00000561947 RBMX2Q9Y388 322 aaKnown RBP8.74□□□□□ -1.01
SMG1-205ENST00000561947 WDR87Q6ZQQ6 2873 aa8.73□□□□□ -1.01
SMG1-205ENST00000561947 LOC107986453A0A1B0GWG9 222 aa8.73□□□□□ -1.01
SMG1-205ENST00000561947 EIF1AYO14602 144 aaKnown RBP8.73□□□□□ -1.01
SMG1-205ENST00000561947 ECDO95905 644 aaPredicted RBP8.73□□□□□ -1.01
SMG1-205ENST00000561947 ITGA5P08648 1049 aa8.73□□□□□ -1.01
SMG1-205ENST00000561947 TMIGD3P0DMS9 266 aaPredicted RBP8.73□□□□□ -1.01
SMG1-205ENST00000561947 ZNF43P17038 809 aa8.73□□□□□ -1.01
SMG1-205ENST00000561947 IGFBP3P17936 291 aaPredicted RBP8.73□□□□□ -1.01
SMG1-205ENST00000561947 RPS18P62269 152 aaKnown RBP8.73□□□□□ -1.01
SMG1-205ENST00000561947 PLA2G7Q13093 441 aa8.73□□□□□ -1.01
SMG1-205ENST00000561947 BCL2L15Q5TBC7 163 aa8.73□□□□□ -1.01
SMG1-205ENST00000561947 TIGD3Q6B0B8 471 aa8.73□□□□□ -1.01
SMG1-205ENST00000561947 SLC25A47Q6Q0C1 308 aa8.73□□□□□ -1.01
SMG1-205ENST00000561947 C6orf15Q6UXA7 325 aaPredicted RBP8.73□□□□□ -1.01
SMG1-205ENST00000561947 OR1J4Q8NGS1 313 aa8.73□□□□□ -1.01
SMG1-205ENST00000561947 OR13C3Q8NGS6 347 aa8.73□□□□□ -1.01
SMG1-205ENST00000561947 CAPSLQ8WWF8 208 aa8.73□□□□□ -1.01
SMG1-205ENST00000561947 RNF170Q96K19 258 aa8.73□□□□□ -1.01
SMG1-205ENST00000561947 GNRHR2Q96P88 292 aa8.73□□□□□ -1.01
SMG1-205ENST00000561947 ZPBPQ9BS86 351 aa8.73□□□□□ -1.01
SMG1-205ENST00000561947 CACNG6Q9BXT2 260 aa8.73□□□□□ -1.01
SMG1-205ENST00000561947 STRADBQ9C0K7 418 aa8.73□□□□□ -1.01
SMG1-205ENST00000561947 C1orf198Q9H425 327 aa8.73□□□□□ -1.01
SMG1-205ENST00000561947 RYDENQ9NUL5 291 aaKnown RBP8.73□□□□□ -1.01
SMG1-205ENST00000561947 DKKL1Q9UK85 242 aa8.73□□□□□ -1.01
SMG1-205ENST00000561947 TCFL5Q9UL49 500 aa8.73□□□□□ -1.01
SMG1-205ENST00000561947 WDFY3Q8IZQ1 3526 aa8.73□□□□□ -1.01
SMG1-205ENST00000561947 LNP1A1A4G5 178 aa8.73□□□□□ -1.01
SMG1-205ENST00000561947 G3V3Y1 287 aa8.73□□□□□ -1.01
SMG1-205ENST00000561947 GLSO94925 669 aaPredicted RBP8.73□□□□□ -1.01
SMG1-205ENST00000561947 UBCP0CG48 685 aaKnown RBP8.73□□□□□ -1.01
SMG1-205ENST00000561947 KLK2P20151 261 aa8.73□□□□□ -1.01
SMG1-205ENST00000561947 OTX2P32243 289 aa8.73□□□□□ -1.01
SMG1-205ENST00000561947 EIF1AXP47813 144 aaKnown RBP8.73□□□□□ -1.01
SMG1-205ENST00000561947 POU3F4P49335 361 aa8.73□□□□□ -1.01
SMG1-205ENST00000561947 MMP16P51512 607 aa8.73□□□□□ -1.01
SMG1-205ENST00000561947 CCR6P51684 374 aa8.73□□□□□ -1.01
SMG1-205ENST00000561947 AP3S2P59780 193 aa8.73□□□□□ -1.01
SMG1-205ENST00000561947 TMEM244Q5VVB8 128 aa8.73□□□□□ -1.01
SMG1-205ENST00000561947 CARD17Q5XLA6 110 aa8.73□□□□□ -1.01
SMG1-205ENST00000561947 FAM166AQ6J272 317 aa8.73□□□□□ -1.01
SMG1-205ENST00000561947 UTS2BQ765I0 119 aa8.73□□□□□ -1.01
SMG1-205ENST00000561947 NOXA1Q86UR1 476 aa8.73□□□□□ -1.01
SMG1-205ENST00000561947 OR51D1Q8NGF3 324 aa8.73□□□□□ -1.01
SMG1-205ENST00000561947 CT55Q8WUE5 264 aa8.73□□□□□ -1.01
SMG1-205ENST00000561947 SCMH1Q96GD3 660 aa8.73□□□□□ -1.01
SMG1-205ENST00000561947 TMEM41AQ96HV5 264 aa8.73□□□□□ -1.01
SMG1-205ENST00000561947 TP63Q9H3D4 680 aaPredicted RBP8.73□□□□□ -1.01
SMG1-205ENST00000561947 MCUBQ9NWR8 336 aa8.73□□□□□ -1.01
SMG1-205ENST00000561947 FAM206AQ9NX38 181 aa8.73□□□□□ -1.01
SMG1-205ENST00000561947 RCE1Q9Y256 329 aa8.73□□□□□ -1.01
SMG1-205ENST00000561947 KIAA1549Q9HCM3 1950 aa8.73□□□□□ -1.01
SMG1-205ENST00000561947 A0A0A6YYJ9 748 aa8.72□□□□□ -1.01
SMG1-205ENST00000561947 C7orf66A4D0T2 115 aa8.72□□□□□ -1.01
SMG1-205ENST00000561947 ACOT7O00154 380 aa8.72□□□□□ -1.01
SMG1-205ENST00000561947 XRCC3O43542 346 aa8.72□□□□□ -1.01
SMG1-205ENST00000561947 ZIC3O60481 467 aa8.72□□□□□ -1.01
SMG1-205ENST00000561947 DOK2O60496 412 aa8.72□□□□□ -1.01
SMG1-205ENST00000561947 CD37P11049 281 aa8.72□□□□□ -1.01
SMG1-205ENST00000561947 TCN2P20062 427 aa8.72□□□□□ -1.01
SMG1-205ENST00000561947 DCTDP32321 178 aa8.72□□□□□ -1.01
SMG1-205ENST00000561947 DNASE1L1P49184 302 aa8.72□□□□□ -1.01
SMG1-205ENST00000561947 MRPS15P82914 257 aaKnown RBP8.72□□□□□ -1.01
SMG1-205ENST00000561947 IFITM2Q01629 132 aa8.72□□□□□ -1.01
SMG1-205ENST00000561947 CHAF1BQ13112 559 aa8.72□□□□□ -1.01
SMG1-205ENST00000561947 HIST3H3Q16695 136 aa8.72□□□□□ -1.01
SMG1-205ENST00000561947 ZNF468Q5VIY5 522 aaPredicted RBP8.72□□□□□ -1.01
SMG1-205ENST00000561947 RAET1LQ5VY80 246 aa8.72□□□□□ -1.01
SMG1-205ENST00000561947 GLT8D1Q68CQ7 371 aa8.72□□□□□ -1.01
SMG1-205ENST00000561947 ANKRD16Q6P6B7 361 aa8.72□□□□□ -1.01
SMG1-205ENST00000561947 KLHL24Q6TFL4 600 aa8.72□□□□□ -1.01
SMG1-205ENST00000561947 BTN2A1Q7KYR7 527 aa8.72□□□□□ -1.01
SMG1-205ENST00000561947 TIPARPQ7Z3E1 657 aaKnown RBP8.72□□□□□ -1.01
SMG1-205ENST00000561947 PLPP7Q8NBV4 271 aa8.72□□□□□ -1.01
SMG1-205ENST00000561947 OR10S1Q8NGN2 331 aa8.72□□□□□ -1.01
SMG1-205ENST00000561947 FAM3DQ96BQ1 224 aa8.72□□□□□ -1.01
SMG1-205ENST00000561947 LOXL4Q96JB6 756 aa8.72□□□□□ -1.01
SMG1-205ENST00000561947 JSRP1Q96MG2 331 aaPredicted RBP8.72□□□□□ -1.01
SMG1-205ENST00000561947 SEC61A2Q9H9S3 476 aa8.72□□□□□ -1.01
SMG1-205ENST00000561947 HRASLSQ9HDD0 168 aa8.72□□□□□ -1.01
SMG1-205ENST00000561947 EMC7Q9NPA0 242 aa8.72□□□□□ -1.01
SMG1-205ENST00000561947 ZNF275Q9NSD4 429 aaPredicted RBP8.72□□□□□ -1.01
SMG1-205ENST00000561947 MRPL15Q9P015 296 aaKnown RBP8.72□□□□□ -1.01
SMG1-205ENST00000561947 GDF2Q9UK05 429 aaPredicted RBP8.72□□□□□ -1.01
SMG1-205ENST00000561947 CDV3Q9UKY7 258 aaKnown RBP8.72□□□□□ -1.01
SMG1-205ENST00000561947 LHFPL6Q9Y693 200 aa8.72□□□□□ -1.01
SMG1-205ENST00000561947 LOC100289279A0A1B0GTE1 492 aa8.72□□□□□ -1.01
SMG1-205ENST00000561947 LOC101059948A0A1B0GTJ6 334 aa8.72□□□□□ -1.01
SMG1-205ENST00000561947 OR2M5A3KFT3 312 aa8.72□□□□□ -1.01
SMG1-205ENST00000561947 PMS2P1A4D2B8 440 aa8.72□□□□□ -1.01
SMG1-205ENST00000561947 NAP1L6A6NFF2 107 aa8.72□□□□□ -1.01
SMG1-205ENST00000561947 ZNF726A6NNF4 738 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms