RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 FUT1P19526 365 aa8.81□□□□□ -1
CDC42BPB-207ENST00000560492 LAP3P28838 519 aa8.81□□□□□ -1
CDC42BPB-207ENST00000560492 CD80P33681 288 aa8.81□□□□□ -1
CDC42BPB-207ENST00000560492 AQP2P41181 271 aa8.81□□□□□ -1
CDC42BPB-207ENST00000560492 UGT2B15P54855 530 aa8.81□□□□□ -1
CDC42BPB-207ENST00000560492 PCBD1P61457 104 aa8.81□□□□□ -1
CDC42BPB-207ENST00000560492 PSG7Q13046 419 aa8.81□□□□□ -1
CDC42BPB-207ENST00000560492 DUSP7Q16829 419 aa8.81□□□□□ -1
CDC42BPB-207ENST00000560492 DEFB112Q30KQ8 113 aa8.81□□□□□ -1
CDC42BPB-207ENST00000560492 PAGE3Q5JUK9 113 aa8.81□□□□□ -1
CDC42BPB-207ENST00000560492 ZNF362Q5T0B9 420 aaPredicted RBP8.81□□□□□ -1
CDC42BPB-207ENST00000560492 C10orf128Q5T292 105 aa8.81□□□□□ -1
CDC42BPB-207ENST00000560492 LRIF1Q5T3J3 769 aa8.81□□□□□ -1
CDC42BPB-207ENST00000560492 GPR157Q5UAW9 335 aa8.81□□□□□ -1
CDC42BPB-207ENST00000560492 OLFML2AQ68BL7 652 aa8.81□□□□□ -1
CDC42BPB-207ENST00000560492 ZNF774Q6NX45 483 aa8.81□□□□□ -1
CDC42BPB-207ENST00000560492 C1orf94Q6P1W5 598 aa8.81□□□□□ -1
CDC42BPB-207ENST00000560492 LRRN1Q6UXK5 716 aa8.81□□□□□ -1
CDC42BPB-207ENST00000560492 LINC00114Q6XXX2 140 aa8.81□□□□□ -1
CDC42BPB-207ENST00000560492 LRRC28Q86X40 367 aaPredicted RBP8.81□□□□□ -1
CDC42BPB-207ENST00000560492 MSRB3Q8IXL7 192 aa8.81□□□□□ -1
CDC42BPB-207ENST00000560492 OR5AS1Q8N127 324 aa8.81□□□□□ -1
CDC42BPB-207ENST00000560492 ZNF283Q8N7M2 679 aa8.81□□□□□ -1
CDC42BPB-207ENST00000560492 OR10S1Q8NGN2 331 aa8.81□□□□□ -1
CDC42BPB-207ENST00000560492 LRRC8CQ8TDW0 803 aa8.81□□□□□ -1
CDC42BPB-207ENST00000560492 THOC1Q96FV9 657 aaKnown RBP8.81□□□□□ -1
CDC42BPB-207ENST00000560492 MPP4Q96JB8 637 aa8.81□□□□□ -1
CDC42BPB-207ENST00000560492 SAMD8Q96LT4 415 aa8.81□□□□□ -1
CDC42BPB-207ENST00000560492 OR2V2Q96R30 315 aa8.81□□□□□ -1
CDC42BPB-207ENST00000560492 NSRP1Q9H0G5 558 aaKnown RBP8.81□□□□□ -1
CDC42BPB-207ENST00000560492 WNT5BQ9H1J7 359 aa8.81□□□□□ -1
CDC42BPB-207ENST00000560492 IKZF5Q9H5V7 419 aa8.81□□□□□ -1
CDC42BPB-207ENST00000560492 KIF17Q9P2E2 1029 aa8.81□□□□□ -1
CDC42BPB-207ENST00000560492 IL20RAQ9UHF4 553 aa8.81□□□□□ -1
CDC42BPB-207ENST00000560492 IGHV2-70DA0A0C4DH43 119 aa8.8□□□□□ -1
CDC42BPB-207ENST00000560492 IGHV3-64DA0A0J9YX35 117 aa8.8□□□□□ -1
CDC42BPB-207ENST00000560492 CENPBD1B2RD01 187 aa8.8□□□□□ -1
CDC42BPB-207ENST00000560492 OR7A10O76100 309 aa8.8□□□□□ -1
CDC42BPB-207ENST00000560492 CYB5R3P00387 301 aaPredicted RBP8.8□□□□□ -1
CDC42BPB-207ENST00000560492 HOXB9P17482 250 aaPredicted RBP8.8□□□□□ -1
CDC42BPB-207ENST00000560492 HTR5AP47898 357 aa8.8□□□□□ -1
CDC42BPB-207ENST00000560492 TAS2R41P59536 307 aa8.8□□□□□ -1
CDC42BPB-207ENST00000560492 GABPB1Q06547 395 aaPredicted RBP8.8□□□□□ -1
CDC42BPB-207ENST00000560492 PAX8Q06710 450 aa8.8□□□□□ -1
CDC42BPB-207ENST00000560492 CDK5R2Q13319 367 aa8.8□□□□□ -1
CDC42BPB-207ENST00000560492 NPTX1Q15818 432 aa8.8□□□□□ -1
CDC42BPB-207ENST00000560492 HIST3H3Q16695 136 aa8.8□□□□□ -1
CDC42BPB-207ENST00000560492 AGKQ53H12 422 aa8.8□□□□□ -1
CDC42BPB-207ENST00000560492 NLRC3Q7RTR2 1065 aa8.8□□□□□ -1
CDC42BPB-207ENST00000560492 MAVSQ7Z434 540 aa8.8□□□□□ -1
CDC42BPB-207ENST00000560492 NPEPL1Q8NDH3 523 aa8.8□□□□□ -1
CDC42BPB-207ENST00000560492 OR8B3Q8NGG8 313 aa8.8□□□□□ -1
CDC42BPB-207ENST00000560492 MOSPD2Q8NHP6 518 aa8.8□□□□□ -1
CDC42BPB-207ENST00000560492 PFN4Q8NHR9 129 aa8.8□□□□□ -1
CDC42BPB-207ENST00000560492 HDAC2Q92769 488 aaKnown RBP8.8□□□□□ -1
CDC42BPB-207ENST00000560492 NABP1Q96AH0 204 aa8.8□□□□□ -1
CDC42BPB-207ENST00000560492 CMBLQ96DG6 245 aa8.8□□□□□ -1
CDC42BPB-207ENST00000560492 SGTBQ96EQ0 304 aa8.8□□□□□ -1
CDC42BPB-207ENST00000560492 MAGEB18Q96M61 343 aa8.8□□□□□ -1
CDC42BPB-207ENST00000560492 RBP7Q96R05 134 aa8.8□□□□□ -1
CDC42BPB-207ENST00000560492 OR8B2Q96RD0 313 aa8.8□□□□□ -1
CDC42BPB-207ENST00000560492 OCSTAMPQ9BR26 566 aa8.8□□□□□ -1
CDC42BPB-207ENST00000560492 MRPL13Q9BYD1 178 aaKnown RBP8.8□□□□□ -1
CDC42BPB-207ENST00000560492 MAN2C1Q9NTJ4 1040 aa8.8□□□□□ -1
CDC42BPB-207ENST00000560492 IL19Q9UHD0 177 aa8.8□□□□□ -1
CDC42BPB-207ENST00000560492 NDRG4Q9ULP0 352 aaKnown RBP8.8□□□□□ -1
CDC42BPB-207ENST00000560492 POLR3KQ9Y2Y1 108 aaPredicted RBP8.8□□□□□ -1
CDC42BPB-207ENST00000560492 TIMM10BQ9Y5J6 103 aa8.8□□□□□ -1
CDC42BPB-207ENST00000560492 MMP24Q9Y5R2 645 aa8.8□□□□□ -1
CDC42BPB-207ENST00000560492 USH1CQ9Y6N9 552 aa8.8□□□□□ -1
CDC42BPB-207ENST00000560492 IGKV1D-43A0A0B4J1Z2 117 aa8.79□□□□□ -1
CDC42BPB-207ENST00000560492 C12orf71A8MTZ7 269 aa8.79□□□□□ -1
CDC42BPB-207ENST00000560492 SRRM5B3KS81 715 aa8.79□□□□□ -1
CDC42BPB-207ENST00000560492 F5H0A9 414 aaPredicted RBP8.79□□□□□ -1
CDC42BPB-207ENST00000560492 TMEM178BH3BS89 294 aa8.79□□□□□ -1
CDC42BPB-207ENST00000560492 DOK2O60496 412 aa8.79□□□□□ -1
CDC42BPB-207ENST00000560492 SHOX2O60902 331 aaPredicted RBP8.79□□□□□ -1
CDC42BPB-207ENST00000560492 MT-ND1P03886 318 aa8.79□□□□□ -1
CDC42BPB-207ENST00000560492 THY1P04216 161 aa8.79□□□□□ -1
CDC42BPB-207ENST00000560492 CST2P09228 141 aa8.79□□□□□ -1
CDC42BPB-207ENST00000560492 GPX2P18283 190 aa8.79□□□□□ -1
CDC42BPB-207ENST00000560492 PCBP3P57721 371 aaKnown RBP8.79□□□□□ -1
CDC42BPB-207ENST00000560492 SLC27A4Q6P1M0 643 aa8.79□□□□□ -1
CDC42BPB-207ENST00000560492 KLBQ86Z14 1044 aa8.79□□□□□ -1
CDC42BPB-207ENST00000560492 SLC30A8Q8IWU4 369 aa8.79□□□□□ -1
CDC42BPB-207ENST00000560492 GPR32P1Q8NGA4 272 aa8.79□□□□□ -1
CDC42BPB-207ENST00000560492 OR10AD1Q8NGE0 317 aa8.79□□□□□ -1
CDC42BPB-207ENST00000560492 OR4D11Q8NGI4 311 aa8.79□□□□□ -1
CDC42BPB-207ENST00000560492 ZNF420Q8TAQ5 688 aaPredicted RBP8.79□□□□□ -1
CDC42BPB-207ENST00000560492 TMEM255BQ8WV15 326 aa8.79□□□□□ -1
CDC42BPB-207ENST00000560492 RAB40AQ8WXH6 277 aa8.79□□□□□ -1
CDC42BPB-207ENST00000560492 UPRTQ96BW1 309 aa8.79□□□□□ -1
CDC42BPB-207ENST00000560492 NEIL1Q96FI4 390 aaPredicted RBP8.79□□□□□ -1
CDC42BPB-207ENST00000560492 CPPED1Q9BRF8 314 aaPredicted RBP8.79□□□□□ -1
CDC42BPB-207ENST00000560492 NUDT16L1Q9BRJ7 211 aaKnown RBP8.79□□□□□ -1
CDC42BPB-207ENST00000560492 PCGF1Q9BSM1 259 aa8.79□□□□□ -1
CDC42BPB-207ENST00000560492 FAM107BQ9H098 131 aa8.79□□□□□ -1
CDC42BPB-207ENST00000560492 POFUT1Q9H488 388 aa8.79□□□□□ -1
CDC42BPB-207ENST00000560492 SMURF2Q9HAU4 748 aa8.79□□□□□ -1
CDC42BPB-207ENST00000560492 MEPEQ9NQ76 525 aaPredicted RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms