RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 SLC6A2P23975 617 aa13.82□□□□□ -0.2
HERC1-207ENST00000560316 LAP3P28838 519 aa13.82□□□□□ -0.2
HERC1-207ENST00000560316 PITPNBP48739 271 aa13.82□□□□□ -0.2
HERC1-207ENST00000560316 ERFP50548 548 aa13.82□□□□□ -0.2
HERC1-207ENST00000560316 PCBP3P57721 371 aaKnown RBP13.82□□□□□ -0.2
HERC1-207ENST00000560316 BPIFB3P59826 476 aa13.82□□□□□ -0.2
HERC1-207ENST00000560316 RPL15P61313 204 aaKnown RBP13.82□□□□□ -0.2
HERC1-207ENST00000560316 TTMPQ5BVD1 217 aa13.82□□□□□ -0.2
HERC1-207ENST00000560316 FAM27BQ5VT28 67 aa13.82□□□□□ -0.2
HERC1-207ENST00000560316 TSPYL5Q86VY4 417 aaPredicted RBP13.82□□□□□ -0.2
HERC1-207ENST00000560316 RBM45Q8IUH3 476 aaKnown RBP13.82□□□□□ -0.2
HERC1-207ENST00000560316 OR8B3Q8NGG8 313 aa13.82□□□□□ -0.2
HERC1-207ENST00000560316 OR6T1Q8NGN1 323 aa13.82□□□□□ -0.2
HERC1-207ENST00000560316 HDAC2Q92769 488 aaKnown RBP13.82□□□□□ -0.2
HERC1-207ENST00000560316 CMBLQ96DG6 245 aa13.82□□□□□ -0.2
HERC1-207ENST00000560316 OR8B2Q96RD0 313 aa13.82□□□□□ -0.2
HERC1-207ENST00000560316 RYR3Q15413 4870 aa13.82□□□□□ -0.2
HERC1-207ENST00000560316 IGHV3-64DA0A0J9YX35 117 aa13.81□□□□□ -0.2
HERC1-207ENST00000560316 TNFRSF13BO14836 293 aaPredicted RBP13.81□□□□□ -0.2
HERC1-207ENST00000560316 IGHV4-59P01825 116 aa13.81□□□□□ -0.2
HERC1-207ENST00000560316 CSF1P09603 554 aa13.81□□□□□ -0.2
HERC1-207ENST00000560316 AQP2P41181 271 aa13.81□□□□□ -0.2
HERC1-207ENST00000560316 DAP3P51398 398 aaKnown RBP13.81□□□□□ -0.2
HERC1-207ENST00000560316 CD47Q08722 323 aa13.81□□□□□ -0.2
HERC1-207ENST00000560316 MPP2Q14168 576 aa13.81□□□□□ -0.2
HERC1-207ENST00000560316 FAM189A2Q15884 450 aa13.81□□□□□ -0.2
HERC1-207ENST00000560316 DUSP7Q16829 419 aa13.81□□□□□ -0.2
HERC1-207ENST00000560316 FAM201AQ5SY85 155 aa13.81□□□□□ -0.2
HERC1-207ENST00000560316 ARMC4Q5T2S8 1044 aa13.81□□□□□ -0.2
HERC1-207ENST00000560316 SLC25A47Q6Q0C1 308 aa13.81□□□□□ -0.2
HERC1-207ENST00000560316 ARL9Q6T311 187 aa13.81□□□□□ -0.2
HERC1-207ENST00000560316 HDDC2Q7Z4H3 204 aa13.81□□□□□ -0.2
HERC1-207ENST00000560316 OR5AS1Q8N127 324 aa13.81□□□□□ -0.2
HERC1-207ENST00000560316 ATG16L2Q8NAA4 619 aa13.81□□□□□ -0.2
HERC1-207ENST00000560316 OR4D11Q8NGI4 311 aa13.81□□□□□ -0.2
HERC1-207ENST00000560316 TBC1D15Q8TC07 691 aa13.81□□□□□ -0.2
HERC1-207ENST00000560316 ADAMTS16Q8TE57 1224 aa13.81□□□□□ -0.2
HERC1-207ENST00000560316 IKZF5Q9H5V7 419 aa13.81□□□□□ -0.2
HERC1-207ENST00000560316 EVA1AQ9H8M9 152 aa13.81□□□□□ -0.2
HERC1-207ENST00000560316 MEPEQ9NQ76 525 aaPredicted RBP13.81□□□□□ -0.2
HERC1-207ENST00000560316 INIPQ9NRY2 104 aa13.81□□□□□ -0.2
HERC1-207ENST00000560316 CLN8Q9UBY8 286 aa13.81□□□□□ -0.2
HERC1-207ENST00000560316 ANGPT4Q9Y264 503 aa13.81□□□□□ -0.2
HERC1-207ENST00000560316 TIMM10BQ9Y5J6 103 aa13.81□□□□□ -0.2
HERC1-207ENST00000560316 C22orf46C9J442 243 aa13.8□□□□□ -0.2
HERC1-207ENST00000560316 OPN1SWP03999 348 aa13.8□□□□□ -0.2
HERC1-207ENST00000560316 CST2P09228 141 aa13.8□□□□□ -0.2
HERC1-207ENST00000560316 KPRPQ5T749 579 aaPredicted RBP13.8□□□□□ -0.2
HERC1-207ENST00000560316 LYPD2Q6UXB3 125 aa13.8□□□□□ -0.2
HERC1-207ENST00000560316 Q6ZSV7 163 aa13.8□□□□□ -0.2
HERC1-207ENST00000560316 NLRC3Q7RTR2 1065 aa13.8□□□□□ -0.2
HERC1-207ENST00000560316 CLDN22Q8N7P3 220 aa13.8□□□□□ -0.2
HERC1-207ENST00000560316 NPEPL1Q8NDH3 523 aa13.8□□□□□ -0.2
HERC1-207ENST00000560316 GPR32P1Q8NGA4 272 aa13.8□□□□□ -0.2
HERC1-207ENST00000560316 OR10AD1Q8NGE0 317 aa13.8□□□□□ -0.2
HERC1-207ENST00000560316 MOSPD2Q8NHP6 518 aa13.8□□□□□ -0.2
HERC1-207ENST00000560316 VANGL1Q8TAA9 524 aaPredicted RBP13.8□□□□□ -0.2
HERC1-207ENST00000560316 MAELQ96JY0 434 aaKnown RBP13.8□□□□□ -0.2
HERC1-207ENST00000560316 MEGF10Q96KG7 1140 aa13.8□□□□□ -0.2
HERC1-207ENST00000560316 PAIP2Q9BPZ3 127 aaKnown RBP13.8□□□□□ -0.2
HERC1-207ENST00000560316 ZNF426Q9BUY5 554 aa13.8□□□□□ -0.2
HERC1-207ENST00000560316 TMEM38AQ9H6F2 299 aa13.8□□□□□ -0.2
HERC1-207ENST00000560316 SMURF2Q9HAU4 748 aa13.8□□□□□ -0.2
HERC1-207ENST00000560316 VAPAQ9P0L0 249 aa13.8□□□□□ -0.2
HERC1-207ENST00000560316 STARD10Q9Y365 291 aa13.8□□□□□ -0.2
HERC1-207ENST00000560316 CENPVL3A0A0U1RRI6 287 aa13.79□□□□□ -0.2
HERC1-207ENST00000560316 TRAPPC13A5PLN9 417 aa13.79□□□□□ -0.2
HERC1-207ENST00000560316 C5orf63A6NC05 138 aa13.79□□□□□ -0.2
HERC1-207ENST00000560316 UBDO15205 165 aa13.79□□□□□ -0.2
HERC1-207ENST00000560316 FUT1P19526 365 aa13.79□□□□□ -0.2
HERC1-207ENST00000560316 CFHR2P36980 270 aa13.79□□□□□ -0.2
HERC1-207ENST00000560316 ZNF404Q494X3 552 aa13.79□□□□□ -0.2
HERC1-207ENST00000560316 LRIF1Q5T3J3 769 aa13.79□□□□□ -0.2
HERC1-207ENST00000560316 SAMD5Q5TGI4 173 aa13.79□□□□□ -0.2
HERC1-207ENST00000560316 WDR25Q64LD2 544 aaPredicted RBP13.79□□□□□ -0.2
HERC1-207ENST00000560316 ZSCAN4Q8NAM6 433 aaPredicted RBP13.79□□□□□ -0.2
HERC1-207ENST00000560316 PFN4Q8NHR9 129 aa13.79□□□□□ -0.2
HERC1-207ENST00000560316 C10orf82Q8WW14 230 aa13.79□□□□□ -0.2
HERC1-207ENST00000560316 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.79□□□□□ -0.2
HERC1-207ENST00000560316 HAVCR1Q96D42 359 aa13.79□□□□□ -0.2
HERC1-207ENST00000560316 OR52B2Q96RD2 323 aa13.79□□□□□ -0.2
HERC1-207ENST00000560316 TBX15Q96SF7 602 aa13.79□□□□□ -0.2
HERC1-207ENST00000560316 TBCCD1Q9NVR7 557 aa13.79□□□□□ -0.2
HERC1-207ENST00000560316 IFNL4K9M1U5 179 aa13.78□□□□□ -0.2
HERC1-207ENST00000560316 ENSAO43768 121 aaKnown RBP13.78□□□□□ -0.2
HERC1-207ENST00000560316 PIP5K1CO60331 668 aa13.78□□□□□ -0.2
HERC1-207ENST00000560316 PCBD1P61457 104 aa13.78□□□□□ -0.2
HERC1-207ENST00000560316 ENDOGQ14249 297 aaKnown RBP13.78□□□□□ -0.2
HERC1-207ENST00000560316 ZNF841Q6ZN19 808 aa13.78□□□□□ -0.2
HERC1-207ENST00000560316 MAVSQ7Z434 540 aa13.78□□□□□ -0.2
HERC1-207ENST00000560316 MOGAT3Q86VF5 341 aa13.78□□□□□ -0.2
HERC1-207ENST00000560316 MRAPQ8TCY5 172 aa13.78□□□□□ -0.2
HERC1-207ENST00000560316 GATAD2BQ8WXI9 593 aa13.78□□□□□ -0.2
HERC1-207ENST00000560316 MPP4Q96JB8 637 aa13.78□□□□□ -0.2
HERC1-207ENST00000560316 PRSS27Q9BQR3 290 aa13.78□□□□□ -0.2
HERC1-207ENST00000560316 SSU72Q9NP77 194 aaKnown RBP13.78□□□□□ -0.2
HERC1-207ENST00000560316 KCNK9Q9NPC2 374 aa13.78□□□□□ -0.2
HERC1-207ENST00000560316 ACOXLQ9NUZ1 547 aa13.78□□□□□ -0.2
HERC1-207ENST00000560316 NDRG4Q9ULP0 352 aaKnown RBP13.78□□□□□ -0.2
HERC1-207ENST00000560316 A0A0U1RQK1 487 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms