RNA–Protein interactions for RNA: ENST00000559551.5

RABGGTA-209, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-209ENST00000559551 RNF122Q9H9V4 155 aa12.6□□□□□ -0.39
RABGGTA-209ENST00000559551 CYB5R1Q9UHQ9 305 aa12.6□□□□□ -0.39
RABGGTA-209ENST00000559551 GNG8Q9UK08 70 aa12.6□□□□□ -0.39
RABGGTA-209ENST00000559551 NOSIPQ9Y314 301 aaKnown RBP12.6□□□□□ -0.39
RABGGTA-209ENST00000559551 AKAP8O43823 692 aaKnown RBP12.6□□□□□ -0.39
RABGGTA-209ENST00000559551 AIREO43918 545 aa12.6□□□□□ -0.39
RABGGTA-209ENST00000559551 SLC43A1O75387 559 aa12.6□□□□□ -0.39
RABGGTA-209ENST00000559551 PTTG1O95997 202 aa12.6□□□□□ -0.39
RABGGTA-209ENST00000559551 TDGF1P3P51864 188 aa12.6□□□□□ -0.39
RABGGTA-209ENST00000559551 ACTA2P62736 377 aa12.6□□□□□ -0.39
RABGGTA-209ENST00000559551 ACTG2P63267 376 aa12.6□□□□□ -0.39
RABGGTA-209ENST00000559551 BDH1Q02338 343 aa12.6□□□□□ -0.39
RABGGTA-209ENST00000559551 EIF2B1Q14232 305 aaKnown RBP12.6□□□□□ -0.39
RABGGTA-209ENST00000559551 PRR30Q53SZ7 412 aaPredicted RBP12.6□□□□□ -0.39
RABGGTA-209ENST00000559551 DMKNQ6E0U4 476 aaPredicted RBP12.6□□□□□ -0.39
RABGGTA-209ENST00000559551 LRRN1Q6UXK5 716 aa12.6□□□□□ -0.39
RABGGTA-209ENST00000559551 SPATC1Q76KD6 591 aa12.6□□□□□ -0.39
RABGGTA-209ENST00000559551 SNX29P2Q8IUI4 249 aa12.6□□□□□ -0.39
RABGGTA-209ENST00000559551 SLC7A5P1Q8MH63 180 aa12.6□□□□□ -0.39
RABGGTA-209ENST00000559551 RPS4Y2Q8TD47 263 aa12.6□□□□□ -0.39
RABGGTA-209ENST00000559551 SARAFQ96BY9 339 aa12.6□□□□□ -0.39
RABGGTA-209ENST00000559551 OR8B4Q96RC9 309 aa12.6□□□□□ -0.39
RABGGTA-209ENST00000559551 MNTQ99583 582 aa12.6□□□□□ -0.39
RABGGTA-209ENST00000559551 CHCHD6Q9BRQ6 235 aa12.6□□□□□ -0.39
RABGGTA-209ENST00000559551 PRRG4Q9BZD6 226 aa12.6□□□□□ -0.39
RABGGTA-209ENST00000559551 ULBP2Q9BZM5 246 aa12.6□□□□□ -0.39
RABGGTA-209ENST00000559551 MMP27Q9H306 513 aa12.6□□□□□ -0.39
RABGGTA-209ENST00000559551 CRLF2Q9HC73 371 aa12.6□□□□□ -0.39
RABGGTA-209ENST00000559551 SLC7A10Q9NS82 523 aa12.6□□□□□ -0.39
RABGGTA-209ENST00000559551 ZNF175Q9Y473 711 aa12.6□□□□□ -0.39
RABGGTA-209ENST00000559551 A3GALT2U3KPV4 340 aa12.6□□□□□ -0.39
RABGGTA-209ENST00000559551 SPTA1P02549 2419 aa12.6□□□□□ -0.39
RABGGTA-209ENST00000559551 SHANK1Q9Y566 2161 aa12.59□□□□□ -0.39
RABGGTA-209ENST00000559551 RGS13O14921 159 aa12.59□□□□□ -0.39
RABGGTA-209ENST00000559551 OGG1O15527 345 aa12.59□□□□□ -0.39
RABGGTA-209ENST00000559551 YES1P07947 543 aa12.59□□□□□ -0.39
RABGGTA-209ENST00000559551 UGT2B10P36537 528 aa12.59□□□□□ -0.39
RABGGTA-209ENST00000559551 ENDOGQ14249 297 aaKnown RBP12.59□□□□□ -0.39
RABGGTA-209ENST00000559551 GUSBP1Q15486 140 aa12.59□□□□□ -0.39
RABGGTA-209ENST00000559551 CFAP77Q6ZQR2 320 aa12.59□□□□□ -0.39
RABGGTA-209ENST00000559551 CHMP1BQ7LBR1 199 aa12.59□□□□□ -0.39
RABGGTA-209ENST00000559551 DCXRQ7Z4W1 244 aa12.59□□□□□ -0.39
RABGGTA-209ENST00000559551 LYSMD2Q8IV50 215 aa12.59□□□□□ -0.39
RABGGTA-209ENST00000559551 CISD2Q8N5K1 135 aaKnown RBP12.59□□□□□ -0.39
RABGGTA-209ENST00000559551 MCFD2Q8NI22 146 aa12.59□□□□□ -0.39
RABGGTA-209ENST00000559551 INTS12Q96CB8 462 aaKnown RBP12.59□□□□□ -0.39
RABGGTA-209ENST00000559551 RBM24Q9BX46 236 aaKnown RBP12.59□□□□□ -0.39
RABGGTA-209ENST00000559551 POU2F3Q9UKI9 436 aa12.59□□□□□ -0.39
RABGGTA-209ENST00000559551 GPR171O14626 319 aa12.58□□□□□ -0.39
RABGGTA-209ENST00000559551 ZNF823P16415 610 aa12.58□□□□□ -0.39
RABGGTA-209ENST00000559551 AGTR1P30556 359 aa12.58□□□□□ -0.39
RABGGTA-209ENST00000559551 FABP5Q01469 135 aa12.58□□□□□ -0.39
RABGGTA-209ENST00000559551 ROM1Q03395 351 aa12.58□□□□□ -0.39
RABGGTA-209ENST00000559551 EGR3Q06889 387 aa12.58□□□□□ -0.39
RABGGTA-209ENST00000559551 RNPS1Q15287 305 aaKnown RBP12.58□□□□□ -0.39
RABGGTA-209ENST00000559551 LIPNQ5VXI9 398 aa12.58□□□□□ -0.39
RABGGTA-209ENST00000559551 SLC18B1Q6NT16 456 aa12.58□□□□□ -0.39
RABGGTA-209ENST00000559551 SEM1Q6ZVN7 128 aa12.58□□□□□ -0.39
RABGGTA-209ENST00000559551 UFD1Q92890 307 aa12.58□□□□□ -0.39
RABGGTA-209ENST00000559551 TRIB1Q96RU8 372 aa12.58□□□□□ -0.39
RABGGTA-209ENST00000559551 ZNF416Q9BWM5 594 aa12.58□□□□□ -0.39
RABGGTA-209ENST00000559551 PRORYQ9H606 182 aa12.58□□□□□ -0.39
RABGGTA-209ENST00000559551 GPR35Q9HC97 309 aa12.58□□□□□ -0.39
RABGGTA-209ENST00000559551 TRIM36Q9NQ86 728 aa12.58□□□□□ -0.39
RABGGTA-209ENST00000559551 PRR14LQ5THK1 2151 aa12.58□□□□□ -0.4
RABGGTA-209ENST00000559551 LOC100506127A0A0U1RQW1 187 aa12.58□□□□□ -0.4
RABGGTA-209ENST00000559551 METTL15A6NJ78 407 aa12.58□□□□□ -0.4
RABGGTA-209ENST00000559551 PLPP2O43688 288 aa12.58□□□□□ -0.4
RABGGTA-209ENST00000559551 MRPL33O75394 65 aaKnown RBP12.58□□□□□ -0.4
RABGGTA-209ENST00000559551 CRYABP02511 175 aaKnown RBP12.58□□□□□ -0.4
RABGGTA-209ENST00000559551 SIRPAP78324 504 aa12.58□□□□□ -0.4
RABGGTA-209ENST00000559551 CDK5R1Q15078 307 aa12.58□□□□□ -0.4
RABGGTA-209ENST00000559551 ACSF3Q4G176 576 aaPredicted RBP12.58□□□□□ -0.4
RABGGTA-209ENST00000559551 RTL6Q6ICC9 239 aa12.58□□□□□ -0.4
RABGGTA-209ENST00000559551 CD200R1LQ6Q8B3 271 aa12.58□□□□□ -0.4
RABGGTA-209ENST00000559551 ARL9Q6T311 187 aa12.58□□□□□ -0.4
RABGGTA-209ENST00000559551 TMEM91Q6ZNR0 172 aa12.58□□□□□ -0.4
RABGGTA-209ENST00000559551 C9orf106Q8NAJ2 232 aa12.58□□□□□ -0.4
RABGGTA-209ENST00000559551 OR52N5Q8NH56 324 aa12.58□□□□□ -0.4
RABGGTA-209ENST00000559551 SLCO5A1Q9H2Y9 848 aa12.58□□□□□ -0.4
RABGGTA-209ENST00000559551 PNRC2Q9NPJ4 139 aaKnown RBP12.58□□□□□ -0.4
RABGGTA-209ENST00000559551 EMC3Q9P0I2 261 aa12.58□□□□□ -0.4
RABGGTA-209ENST00000559551 FBXL3Q9UKT7 428 aa12.58□□□□□ -0.4
RABGGTA-209ENST00000559551 RBMX2Q9Y388 322 aaKnown RBP12.58□□□□□ -0.4
RABGGTA-209ENST00000559551 TMEM14AQ9Y6G1 99 aa12.58□□□□□ -0.4
RABGGTA-209ENST00000559551 OR14I1A6ND48 311 aa12.57□□□□□ -0.4
RABGGTA-209ENST00000559551 SRSF10O75494 262 aaKnown RBP12.57□□□□□ -0.4
RABGGTA-209ENST00000559551 RPP14O95059 124 aaKnown RBP12.57□□□□□ -0.4
RABGGTA-209ENST00000559551 PNPP00491 289 aa12.57□□□□□ -0.4
RABGGTA-209ENST00000559551 ANOS1P23352 680 aa12.57□□□□□ -0.4
RABGGTA-209ENST00000559551 SGCAQ16586 387 aa12.57□□□□□ -0.4
RABGGTA-209ENST00000559551 CEACAM16Q2WEN9 425 aa12.57□□□□□ -0.4
RABGGTA-209ENST00000559551 YIPF7Q8N8F6 280 aa12.57□□□□□ -0.4
RABGGTA-209ENST00000559551 ZNF454Q8N9F8 522 aa12.57□□□□□ -0.4
RABGGTA-209ENST00000559551 OR13C5Q8NGS8 318 aa12.57□□□□□ -0.4
RABGGTA-209ENST00000559551 ZNF486Q96H40 463 aaPredicted RBP12.57□□□□□ -0.4
RABGGTA-209ENST00000559551 TMED9Q9BVK6 235 aa12.57□□□□□ -0.4
RABGGTA-209ENST00000559551 SIAEQ9HAT2 523 aa12.57□□□□□ -0.4
RABGGTA-209ENST00000559551 ELOVL3Q9HB03 270 aa12.57□□□□□ -0.4
RABGGTA-209ENST00000559551 ABCB10Q9NRK6 738 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms