RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 IGFBPL1Q8WX77 278 aa9.43□□□□□ -0.9
TPM1-217ENST00000559108 POM121L2Q96KW2 1035 aa9.43□□□□□ -0.9
TPM1-217ENST00000559108 USB1Q9BQ65 265 aaKnown RBP9.43□□□□□ -0.9
TPM1-217ENST00000559108 CLEC4MQ9H2X3 399 aaPredicted RBP9.43□□□□□ -0.9
TPM1-217ENST00000559108 CYB5R1Q9UHQ9 305 aa9.43□□□□□ -0.9
TPM1-217ENST00000559108 RNF115Q9Y4L5 304 aa9.43□□□□□ -0.9
TPM1-217ENST00000559108 LOC100130705A0A1B0GUX0 176 aa9.42□□□□□ -0.9
TPM1-217ENST00000559108 OR6C6A6NF89 314 aa9.42□□□□□ -0.9
TPM1-217ENST00000559108 H0YHG0 523 aa9.42□□□□□ -0.9
TPM1-217ENST00000559108 SLC16A6O15403 523 aa9.42□□□□□ -0.9
TPM1-217ENST00000559108 GPRIN2O60269 458 aa9.42□□□□□ -0.9
TPM1-217ENST00000559108 APOL3O95236 402 aa9.42□□□□□ -0.9
TPM1-217ENST00000559108 FARS2O95363 451 aaKnown RBP9.42□□□□□ -0.9
TPM1-217ENST00000559108 SERPINA5P05154 406 aa9.42□□□□□ -0.9
TPM1-217ENST00000559108 ADRA2AP08913 450 aa9.42□□□□□ -0.9
TPM1-217ENST00000559108 MRPL3P09001 348 aaKnown RBP9.42□□□□□ -0.9
TPM1-217ENST00000559108 NAA10P41227 235 aaPredicted RBP9.42□□□□□ -0.9
TPM1-217ENST00000559108 AQP4P55087 323 aa9.42□□□□□ -0.9
TPM1-217ENST00000559108 ERVS71-1P61550 626 aa9.42□□□□□ -0.9
TPM1-217ENST00000559108 NKX6-1P78426 367 aaPredicted RBP9.42□□□□□ -0.9
TPM1-217ENST00000559108 GLO1Q04760 184 aa9.42□□□□□ -0.9
TPM1-217ENST00000559108 AQP6Q13520 282 aa9.42□□□□□ -0.9
TPM1-217ENST00000559108 KRTAP27-1Q3LI81 207 aa9.42□□□□□ -0.9
TPM1-217ENST00000559108 C3orf36Q3SXR2 165 aa9.42□□□□□ -0.9
TPM1-217ENST00000559108 KLHL12Q53G59 568 aa9.42□□□□□ -0.9
TPM1-217ENST00000559108 FBXW10Q5XX13 1052 aa9.42□□□□□ -0.9
TPM1-217ENST00000559108 SHFQ7M4L6 423 aa9.42□□□□□ -0.9
TPM1-217ENST00000559108 ZNF101Q8IZC7 436 aa9.42□□□□□ -0.9
TPM1-217ENST00000559108 PIAS4Q8N2W9 510 aaPredicted RBP9.42□□□□□ -0.9
TPM1-217ENST00000559108 PACRGLQ8N7B6 248 aa9.42□□□□□ -0.9
TPM1-217ENST00000559108 ZNF582Q96NG8 517 aaPredicted RBP9.42□□□□□ -0.9
TPM1-217ENST00000559108 POFUT1Q9H488 388 aa9.42□□□□□ -0.9
TPM1-217ENST00000559108 ESRP2Q9H6T0 727 aaKnown RBP9.42□□□□□ -0.9
TPM1-217ENST00000559108 KCNG2Q9UJ96 466 aa9.42□□□□□ -0.9
TPM1-217ENST00000559108 GDF2Q9UK05 429 aaPredicted RBP9.42□□□□□ -0.9
TPM1-217ENST00000559108 COPS3Q9UNS2 423 aa9.42□□□□□ -0.9
TPM1-217ENST00000559108 ARFGEF3Q5TH69 2177 aa9.41□□□□□ -0.9
TPM1-217ENST00000559108 SPG11Q96JI7 2443 aa9.41□□□□□ -0.9
TPM1-217ENST00000559108 PRODHO43272 600 aa9.41□□□□□ -0.9
TPM1-217ENST00000559108 ENTPD6O75354 484 aa9.41□□□□□ -0.9
TPM1-217ENST00000559108 WBP4O75554 376 aaKnown RBP9.41□□□□□ -0.9
TPM1-217ENST00000559108 RAB36O95755 333 aa9.41□□□□□ -0.9
TPM1-217ENST00000559108 HLA-DQA2P01906 255 aa9.41□□□□□ -0.9
TPM1-217ENST00000559108 CD3EP07766 207 aa9.41□□□□□ -0.9
TPM1-217ENST00000559108 SPARCP09486 303 aa9.41□□□□□ -0.9
TPM1-217ENST00000559108 PTAFRP25105 342 aa9.41□□□□□ -0.9
TPM1-217ENST00000559108 SSTR2P30874 369 aa9.41□□□□□ -0.9
TPM1-217ENST00000559108 ENTPD1P49961 510 aa9.41□□□□□ -0.9
TPM1-217ENST00000559108 ADAM8P78325 824 aa9.41□□□□□ -0.9
TPM1-217ENST00000559108 SMN1Q16637 294 aaKnown RBP9.41□□□□□ -0.9
TPM1-217ENST00000559108 NXNL2Q5VZ03 156 aa9.41□□□□□ -0.9
TPM1-217ENST00000559108 TMEM154Q6P9G4 183 aa9.41□□□□□ -0.9
TPM1-217ENST00000559108 TMEM108Q6UXF1 575 aa9.41□□□□□ -0.9
TPM1-217ENST00000559108 RFPL4BQ6ZWI9 263 aa9.41□□□□□ -0.9
TPM1-217ENST00000559108 DPY19L4Q7Z388 723 aa9.41□□□□□ -0.9
TPM1-217ENST00000559108 NAA40Q86UY6 237 aa9.41□□□□□ -0.9
TPM1-217ENST00000559108 ERI1Q8IV48 349 aaKnown RBP9.41□□□□□ -0.9
TPM1-217ENST00000559108 CCDC36Q8IYA8 594 aa9.41□□□□□ -0.9
TPM1-217ENST00000559108 SLC30A7Q8NEW0 376 aa9.41□□□□□ -0.9
TPM1-217ENST00000559108 NANOS1Q8WY41 292 aaKnown RBP9.41□□□□□ -0.9
TPM1-217ENST00000559108 AKAP1Q92667 903 aaKnown RBP eCLIP9.41□□□□□ -0.9
TPM1-217ENST00000559108 PLEKHA8Q96JA3 519 aa9.41□□□□□ -0.9
TPM1-217ENST00000559108 TEAD3Q99594 435 aa9.41□□□□□ -0.9
TPM1-217ENST00000559108 RHNO1Q9BSD3 238 aa9.41□□□□□ -0.9
TPM1-217ENST00000559108 ADI1Q9BV57 179 aa9.41□□□□□ -0.9
TPM1-217ENST00000559108 TTTY10Q9BZA0 68 aa9.41□□□□□ -0.9
TPM1-217ENST00000559108 OR51B6Q9H340 312 aa9.41□□□□□ -0.9
TPM1-217ENST00000559108 RNF121Q9H920 327 aa9.41□□□□□ -0.9
TPM1-217ENST00000559108 ADGRL4Q9HBW9 690 aa9.41□□□□□ -0.9
TPM1-217ENST00000559108 CCNB1IP1Q9NPC3 277 aa9.41□□□□□ -0.9
TPM1-217ENST00000559108 ENOPH1Q9UHY7 261 aa9.41□□□□□ -0.9
TPM1-217ENST00000559108 TIMM10BQ9Y5J6 103 aa9.41□□□□□ -0.9
TPM1-217ENST00000559108 GMPPBQ9Y5P6 360 aa9.41□□□□□ -0.9
TPM1-217ENST00000559108 CHD3Q12873 2000 aaKnown RBP9.41□□□□□ -0.9
TPM1-217ENST00000559108 C12orf71A8MTZ7 269 aa9.4□□□□□ -0.9
TPM1-217ENST00000559108 ZNF593O00488 134 aaPredicted RBP9.4□□□□□ -0.9
TPM1-217ENST00000559108 MAGEB4O15481 346 aaPredicted RBP9.4□□□□□ -0.9
TPM1-217ENST00000559108 SGCEO43556 437 aa9.4□□□□□ -0.9
TPM1-217ENST00000559108 DOK2O60496 412 aa9.4□□□□□ -0.9
TPM1-217ENST00000559108 NGFP01138 241 aa9.4□□□□□ -0.9
TPM1-217ENST00000559108 SOD3P08294 240 aa9.4□□□□□ -0.9
TPM1-217ENST00000559108 DANCRP0C864 163 aa9.4□□□□□ -0.9
TPM1-217ENST00000559108 FAM157BP0CG42 384 aa9.4□□□□□ -0.9
TPM1-217ENST00000559108 STOMP27105 288 aa9.4□□□□□ -0.9
TPM1-217ENST00000559108 FMO3P31513 532 aa9.4□□□□□ -0.9
TPM1-217ENST00000559108 NUDT6P53370 316 aa9.4□□□□□ -0.9
TPM1-217ENST00000559108 NR1H2P55055 460 aa9.4□□□□□ -0.9
TPM1-217ENST00000559108 CDH11P55287 796 aa9.4□□□□□ -0.9
TPM1-217ENST00000559108 SNRPGP62308 76 aaKnown RBP9.4□□□□□ -0.9
TPM1-217ENST00000559108 KEAP1Q14145 624 aa9.4□□□□□ -0.9
TPM1-217ENST00000559108 GGTLC2Q14390 218 aa9.4□□□□□ -0.9
TPM1-217ENST00000559108 ZNF672Q499Z4 452 aaPredicted RBP9.4□□□□□ -0.9
TPM1-217ENST00000559108 TEX30Q5JUR7 227 aa9.4□□□□□ -0.9
TPM1-217ENST00000559108 C6orf52Q5T4I8 152 aa9.4□□□□□ -0.9
TPM1-217ENST00000559108 ZNF691Q5VV52 312 aa9.4□□□□□ -0.9
TPM1-217ENST00000559108 KRT80Q6KB66 452 aa9.4□□□□□ -0.9
TPM1-217ENST00000559108 TMEM53Q6P2H8 277 aa9.4□□□□□ -0.9
TPM1-217ENST00000559108 SLC22A25Q6T423 547 aa9.4□□□□□ -0.9
TPM1-217ENST00000559108 USP51Q70EK9 711 aa9.4□□□□□ -0.9
TPM1-217ENST00000559108 SPATC1Q76KD6 591 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms