RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 ZNF786Q8N393 782 aa6.27□□□□□ -1.41
SPG11-213ENST00000558988 RBM15BQ8NDT2 890 aaKnown RBP6.27□□□□□ -1.41
SPG11-213ENST00000558988 NOXO1Q8NFA2 376 aa6.27□□□□□ -1.41
SPG11-213ENST00000558988 MOSPD2Q8NHP6 518 aa6.27□□□□□ -1.41
SPG11-213ENST00000558988 RASSF5Q8WWW0 418 aa6.27□□□□□ -1.41
SPG11-213ENST00000558988 GTF3AQ92664 365 aaKnown RBP6.27□□□□□ -1.41
SPG11-213ENST00000558988 TMEM54Q969K7 222 aa6.27□□□□□ -1.41
SPG11-213ENST00000558988 SLC25A44Q96H78 314 aaPredicted RBP6.27□□□□□ -1.41
SPG11-213ENST00000558988 MPP4Q96JB8 637 aa6.27□□□□□ -1.41
SPG11-213ENST00000558988 ZNF75AQ96N20 296 aa6.27□□□□□ -1.41
SPG11-213ENST00000558988 TSPAN32Q96QS1 320 aa6.27□□□□□ -1.41
SPG11-213ENST00000558988 SH3GL1Q99961 368 aa6.27□□□□□ -1.41
SPG11-213ENST00000558988 C19orf24Q9BVV8 132 aa6.27□□□□□ -1.41
SPG11-213ENST00000558988 OR10A2Q9H208 303 aa6.27□□□□□ -1.41
SPG11-213ENST00000558988 KCNN2Q9H2S1 579 aa6.27□□□□□ -1.41
SPG11-213ENST00000558988 CCNB1IP1Q9NPC3 277 aa6.27□□□□□ -1.41
SPG11-213ENST00000558988 INIPQ9NRY2 104 aa6.27□□□□□ -1.41
SPG11-213ENST00000558988 TREM2Q9NZC2 230 aa6.27□□□□□ -1.41
SPG11-213ENST00000558988 TAAR3PQ9P1P4 343 aa6.27□□□□□ -1.41
SPG11-213ENST00000558988 ARMCX1Q9P291 453 aa6.27□□□□□ -1.41
SPG11-213ENST00000558988 SLC7A8Q9UHI5 535 aa6.27□□□□□ -1.41
SPG11-213ENST00000558988 RIMS3Q9UJD0 308 aa6.27□□□□□ -1.41
SPG11-213ENST00000558988 BAG5Q9UL15 447 aa6.27□□□□□ -1.41
SPG11-213ENST00000558988 MED31Q9Y3C7 131 aa6.27□□□□□ -1.41
SPG11-213ENST00000558988 GMEB1Q9Y692 573 aa6.27□□□□□ -1.41
SPG11-213ENST00000558988 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.27□□□□□ -1.41
SPG11-213ENST00000558988 A0A1W2PPL8 197 aa6.26□□□□□ -1.41
SPG11-213ENST00000558988 FXYD1O00168 92 aa6.26□□□□□ -1.41
SPG11-213ENST00000558988 WNT9BO14905 357 aa6.26□□□□□ -1.41
SPG11-213ENST00000558988 GSTA4O15217 222 aa6.26□□□□□ -1.41
SPG11-213ENST00000558988 ENTPD5O75356 428 aa6.26□□□□□ -1.41
SPG11-213ENST00000558988 TRMUO75648 421 aaKnown RBP6.26□□□□□ -1.41
SPG11-213ENST00000558988 ZNF682O95780 498 aa6.26□□□□□ -1.41
SPG11-213ENST00000558988 IFNA14P01570 189 aa6.26□□□□□ -1.41
SPG11-213ENST00000558988 MT-ND1P03886 318 aa6.26□□□□□ -1.41
SPG11-213ENST00000558988 ASAH2BP0C7U1 165 aa6.26□□□□□ -1.41
SPG11-213ENST00000558988 IFI30P13284 250 aa6.26□□□□□ -1.41
SPG11-213ENST00000558988 ACADSP16219 412 aa6.26□□□□□ -1.41
SPG11-213ENST00000558988 DRD4P21917 467 aa6.26□□□□□ -1.41
SPG11-213ENST00000558988 GIFP27352 417 aa6.26□□□□□ -1.41
SPG11-213ENST00000558988 APLNRP35414 380 aa6.26□□□□□ -1.41
SPG11-213ENST00000558988 GLRXP35754 106 aa6.26□□□□□ -1.41
SPG11-213ENST00000558988 MAGEB1P43366 347 aa6.26□□□□□ -1.41
SPG11-213ENST00000558988 GZMMP51124 257 aa6.26□□□□□ -1.41
SPG11-213ENST00000558988 DAP3P51398 398 aaKnown RBP6.26□□□□□ -1.41
SPG11-213ENST00000558988 KLF3P57682 345 aaPredicted RBP6.26□□□□□ -1.41
SPG11-213ENST00000558988 SELENOVP59797 346 aa6.26□□□□□ -1.41
SPG11-213ENST00000558988 ERVK-25P63136 954 aa6.26□□□□□ -1.41
SPG11-213ENST00000558988 MAPRE2Q15555 327 aa6.26□□□□□ -1.41
SPG11-213ENST00000558988 TSTQ16762 297 aaKnown RBP6.26□□□□□ -1.41
SPG11-213ENST00000558988 CYBRD1Q53TN4 286 aa6.26□□□□□ -1.41
SPG11-213ENST00000558988 PABPC1L2AQ5JQF8 200 aa6.26□□□□□ -1.41
SPG11-213ENST00000558988 METTL21CQ5VZV1 264 aa6.26□□□□□ -1.41
SPG11-213ENST00000558988 TMEM154Q6P9G4 183 aa6.26□□□□□ -1.41
SPG11-213ENST00000558988 SHQ1Q6PI26 577 aaKnown RBP6.26□□□□□ -1.41
SPG11-213ENST00000558988 NHLRC1Q6VVB1 395 aa6.26□□□□□ -1.41
SPG11-213ENST00000558988 THNSL2Q86YJ6 484 aa6.26□□□□□ -1.41
SPG11-213ENST00000558988 CLDN22Q8N7P3 220 aa6.26□□□□□ -1.41
SPG11-213ENST00000558988 OR2T12Q8NG77 320 aa6.26□□□□□ -1.41
SPG11-213ENST00000558988 OR51A7Q8NH64 312 aa6.26□□□□□ -1.41
SPG11-213ENST00000558988 AKR7LQ8NHP1 331 aa6.26□□□□□ -1.41
SPG11-213ENST00000558988 CLDND2Q8NHS1 167 aa6.26□□□□□ -1.41
SPG11-213ENST00000558988 TSPEARQ8WU66 669 aa6.26□□□□□ -1.41
SPG11-213ENST00000558988 SNX33Q8WV41 574 aa6.26□□□□□ -1.41
SPG11-213ENST00000558988 C10orf82Q8WW14 230 aa6.26□□□□□ -1.41
SPG11-213ENST00000558988 TMEM239Q8WW34 195 aa6.26□□□□□ -1.41
SPG11-213ENST00000558988 ASB10Q8WXI3 467 aa6.26□□□□□ -1.41
SPG11-213ENST00000558988 C11orf40Q8WZ69 217 aa6.26□□□□□ -1.41
SPG11-213ENST00000558988 YIPF5Q969M3 257 aa6.26□□□□□ -1.41
SPG11-213ENST00000558988 MCHR2Q969V1 340 aa6.26□□□□□ -1.41
SPG11-213ENST00000558988 RCN3Q96D15 328 aa6.26□□□□□ -1.41
SPG11-213ENST00000558988 PRSS27Q9BQR3 290 aa6.26□□□□□ -1.41
SPG11-213ENST00000558988 SIKE1Q9BRV8 207 aa6.26□□□□□ -1.41
SPG11-213ENST00000558988 SLC19A3Q9BZV2 496 aa6.26□□□□□ -1.41
SPG11-213ENST00000558988 LRMDAQ9H2I8 198 aa6.26□□□□□ -1.41
SPG11-213ENST00000558988 MS4A5Q9H3V2 200 aa6.26□□□□□ -1.41
SPG11-213ENST00000558988 RERGLQ9H628 205 aa6.26□□□□□ -1.41
SPG11-213ENST00000558988 ZNF275Q9NSD4 429 aaPredicted RBP6.26□□□□□ -1.41
SPG11-213ENST00000558988 TMEM160Q9NX00 188 aa6.26□□□□□ -1.41
SPG11-213ENST00000558988 FBXO9Q9UK97 447 aaPredicted RBP6.26□□□□□ -1.41
SPG11-213ENST00000558988 FBXL3Q9UKT7 428 aa6.26□□□□□ -1.41
SPG11-213ENST00000558988 CAPN7Q9Y6W3 813 aa6.26□□□□□ -1.41
SPG11-213ENST00000558988 ATRQ13535 2644 aa6.26□□□□□ -1.41
SPG11-213ENST00000558988 TRAV27A0A087WT01 109 aa6.25□□□□□ -1.41
SPG11-213ENST00000558988 ISPDA4D126 451 aa6.25□□□□□ -1.41
SPG11-213ENST00000558988 C5orf49A4QMS7 147 aa6.25□□□□□ -1.41
SPG11-213ENST00000558988 BBIP1A8MTZ0 92 aa6.25□□□□□ -1.41
SPG11-213ENST00000558988 FAM157AC9JC47 383 aa6.25□□□□□ -1.41
SPG11-213ENST00000558988 H7C1C5 153 aa6.25□□□□□ -1.41
SPG11-213ENST00000558988 SPRY3O43610 288 aa6.25□□□□□ -1.41
SPG11-213ENST00000558988 OR5F1O95221 314 aa6.25□□□□□ -1.41
SPG11-213ENST00000558988 TACSTD2P09758 323 aa6.25□□□□□ -1.41
SPG11-213ENST00000558988 H2AFXP16104 143 aaPredicted RBP6.25□□□□□ -1.41
SPG11-213ENST00000558988 ZNF32P17041 273 aa6.25□□□□□ -1.41
SPG11-213ENST00000558988 CDH15P55291 814 aa6.25□□□□□ -1.41
SPG11-213ENST00000558988 CTXN1P60606 82 aa6.25□□□□□ -1.41
SPG11-213ENST00000558988 LCN6P62502 163 aa6.25□□□□□ -1.41
SPG11-213ENST00000558988 ZP4Q12836 540 aa6.25□□□□□ -1.41
SPG11-213ENST00000558988 RIN1Q13671 783 aa6.25□□□□□ -1.41
SPG11-213ENST00000558988 ALG10Q5BKT4 473 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms