RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 VEGFBP49765 207 aa13.64□□□□□ -0.23
ARHGEF40-207ENST00000556399 C11orf87Q6NUJ2 197 aa13.64□□□□□ -0.23
ARHGEF40-207ENST00000556399 BEND4Q6ZU67 534 aa13.64□□□□□ -0.23
ARHGEF40-207ENST00000556399 TMEM229BQ8NBD8 167 aa13.64□□□□□ -0.23
ARHGEF40-207ENST00000556399 CCDC54Q8NEL0 328 aa13.64□□□□□ -0.23
ARHGEF40-207ENST00000556399 UBL7Q96S82 380 aaPredicted RBP13.64□□□□□ -0.23
ARHGEF40-207ENST00000556399 CMSS1Q9BQ75 279 aaKnown RBP13.64□□□□□ -0.23
ARHGEF40-207ENST00000556399 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.64□□□□□ -0.23
ARHGEF40-207ENST00000556399 DNAJB12Q9NXW2 375 aaKnown RBP13.64□□□□□ -0.23
ARHGEF40-207ENST00000556399 OBP2AQ9NY56 170 aa13.64□□□□□ -0.23
ARHGEF40-207ENST00000556399 LRFN1Q9P244 771 aa13.64□□□□□ -0.23
ARHGEF40-207ENST00000556399 A0A1B0GTH9 108 aa13.64□□□□□ -0.23
ARHGEF40-207ENST00000556399 PRSS37A4D1T9 235 aa13.64□□□□□ -0.23
ARHGEF40-207ENST00000556399 CORO6Q6QEF8 472 aa13.64□□□□□ -0.23
ARHGEF40-207ENST00000556399 OR14K1Q8NGZ2 314 aa13.64□□□□□ -0.23
ARHGEF40-207ENST00000556399 CCDC74AQ96AQ1 378 aa13.64□□□□□ -0.23
ARHGEF40-207ENST00000556399 PRAMEF27A3QJZ7 478 aa13.64□□□□□ -0.23
ARHGEF40-207ENST00000556399 NUDT19A8MXV4 375 aa13.64□□□□□ -0.23
ARHGEF40-207ENST00000556399 CBR1P16152 277 aa13.64□□□□□ -0.23
ARHGEF40-207ENST00000556399 RBM39Q14498 530 aaKnown RBP13.64□□□□□ -0.23
ARHGEF40-207ENST00000556399 PDSS1Q5T2R2 415 aa13.64□□□□□ -0.23
ARHGEF40-207ENST00000556399 MRM1Q6IN84 353 aaKnown RBP13.64□□□□□ -0.23
ARHGEF40-207ENST00000556399 CD200R1LQ6Q8B3 271 aa13.64□□□□□ -0.23
ARHGEF40-207ENST00000556399 P4HA3Q7Z4N8 544 aa13.64□□□□□ -0.23
ARHGEF40-207ENST00000556399 VN1R4Q7Z5H5 301 aa13.64□□□□□ -0.23
ARHGEF40-207ENST00000556399 OR1M1Q8NGA1 313 aa13.64□□□□□ -0.23
ARHGEF40-207ENST00000556399 RLN3Q8WXF3 142 aa13.64□□□□□ -0.23
ARHGEF40-207ENST00000556399 SF3B6Q9Y3B4 125 aaKnown RBP13.64□□□□□ -0.23
ARHGEF40-207ENST00000556399 LINC01553A4QN01 128 aa13.64□□□□□ -0.23
ARHGEF40-207ENST00000556399 OR2W5A6NFC9 320 aa13.64□□□□□ -0.23
ARHGEF40-207ENST00000556399 HMSDA8MTL9 139 aa13.64□□□□□ -0.23
ARHGEF40-207ENST00000556399 ARPC3O15145 178 aa13.64□□□□□ -0.23
ARHGEF40-207ENST00000556399 EIF4E2O60573 245 aaKnown RBP13.64□□□□□ -0.23
ARHGEF40-207ENST00000556399 CD1CP29017 333 aa13.64□□□□□ -0.23
ARHGEF40-207ENST00000556399 EPHA4P54764 986 aa13.64□□□□□ -0.23
ARHGEF40-207ENST00000556399 GRINAQ7Z429 371 aa13.64□□□□□ -0.23
ARHGEF40-207ENST00000556399 ZNF709Q8N972 641 aa13.64□□□□□ -0.23
ARHGEF40-207ENST00000556399 FAM181AQ8N9Y4 354 aa13.64□□□□□ -0.23
ARHGEF40-207ENST00000556399 MR1Q95460 341 aa13.64□□□□□ -0.23
ARHGEF40-207ENST00000556399 OR5B12Q96R08 314 aa13.64□□□□□ -0.23
ARHGEF40-207ENST00000556399 C12orf57Q99622 126 aa13.64□□□□□ -0.23
ARHGEF40-207ENST00000556399 TBX21Q9UL17 535 aa13.64□□□□□ -0.23
ARHGEF40-207ENST00000556399 RARRES3Q9UL19 164 aa13.64□□□□□ -0.23
ARHGEF40-207ENST00000556399 TCRBV16S1A1N1A0A5B0 115 aa13.63□□□□□ -0.23
ARHGEF40-207ENST00000556399 CTSVO60911 334 aa13.63□□□□□ -0.23
ARHGEF40-207ENST00000556399 RAB5CP51148 216 aa13.63□□□□□ -0.23
ARHGEF40-207ENST00000556399 DUSP2Q05923 314 aa13.63□□□□□ -0.23
ARHGEF40-207ENST00000556399 PWWP2BQ6NUJ5 590 aa13.63□□□□□ -0.23
ARHGEF40-207ENST00000556399 OR4S1Q8NGB4 309 aa13.63□□□□□ -0.23
ARHGEF40-207ENST00000556399 PARP12Q9H0J9 701 aaKnown RBP13.63□□□□□ -0.23
ARHGEF40-207ENST00000556399 MMACHCQ9Y4U1 282 aa13.63□□□□□ -0.23
ARHGEF40-207ENST00000556399 OR6C65A6NJZ3 312 aa13.63□□□□□ -0.23
ARHGEF40-207ENST00000556399 IMPA2O14732 288 aa13.63□□□□□ -0.23
ARHGEF40-207ENST00000556399 GNB3P16520 340 aa13.63□□□□□ -0.23
ARHGEF40-207ENST00000556399 EPHA1P21709 976 aa13.63□□□□□ -0.23
ARHGEF40-207ENST00000556399 ZNF74Q16587 644 aa13.63□□□□□ -0.23
ARHGEF40-207ENST00000556399 CHRDL2Q6WN34 429 aa13.63□□□□□ -0.23
ARHGEF40-207ENST00000556399 FBXW12Q6X9E4 464 aa13.63□□□□□ -0.23
ARHGEF40-207ENST00000556399 PRSS41Q7RTY9 318 aa13.63□□□□□ -0.23
ARHGEF40-207ENST00000556399 GALNT16Q8N428 558 aa13.63□□□□□ -0.23
ARHGEF40-207ENST00000556399 FAM213BQ8TBF2 198 aa13.63□□□□□ -0.23
ARHGEF40-207ENST00000556399 PHOSPHO2Q8TCD6 241 aa13.63□□□□□ -0.23
ARHGEF40-207ENST00000556399 ST7LQ8TDW4 575 aa13.63□□□□□ -0.23
ARHGEF40-207ENST00000556399 SERGEFQ9UGK8 458 aa13.63□□□□□ -0.23
ARHGEF40-207ENST00000556399 NDRG3Q9UGV2 375 aa13.63□□□□□ -0.23
ARHGEF40-207ENST00000556399 LCTP09848 1927 aa13.63□□□□□ -0.23
ARHGEF40-207ENST00000556399 CKAP5Q14008 2032 aa13.63□□□□□ -0.23
ARHGEF40-207ENST00000556399 A0A1W2PPV9 198 aa13.63□□□□□ -0.23
ARHGEF40-207ENST00000556399 OIP5O43482 229 aa13.63□□□□□ -0.23
ARHGEF40-207ENST00000556399 CPT2P23786 658 aa13.63□□□□□ -0.23
ARHGEF40-207ENST00000556399 CD80P33681 288 aa13.63□□□□□ -0.23
ARHGEF40-207ENST00000556399 ANKRD16Q6P6B7 361 aa13.63□□□□□ -0.23
ARHGEF40-207ENST00000556399 MARCH1Q8TCQ1 289 aa13.63□□□□□ -0.23
ARHGEF40-207ENST00000556399 GLYATL2Q8WU03 294 aa13.63□□□□□ -0.23
ARHGEF40-207ENST00000556399 CHRDQ9H2X0 955 aa13.63□□□□□ -0.23
ARHGEF40-207ENST00000556399 PRELID3BQ9Y3B1 194 aa13.63□□□□□ -0.23
ARHGEF40-207ENST00000556399 A0A0G2JMZ2 1700 aa13.63□□□□□ -0.23
ARHGEF40-207ENST00000556399 LRRC37A2A6NM11 1700 aa13.63□□□□□ -0.23
ARHGEF40-207ENST00000556399 TRBV11-1A0A0K0K1C0 115 aa13.63□□□□□ -0.23
ARHGEF40-207ENST00000556399 C2orf72A6NCS6 295 aa13.63□□□□□ -0.23
ARHGEF40-207ENST00000556399 CTAG2O75638 210 aa13.63□□□□□ -0.23
ARHGEF40-207ENST00000556399 PI3P19957 117 aa13.63□□□□□ -0.23
ARHGEF40-207ENST00000556399 ALOX5APP20292 161 aa13.63□□□□□ -0.23
ARHGEF40-207ENST00000556399 AVPR2P30518 371 aa13.63□□□□□ -0.23
ARHGEF40-207ENST00000556399 BPIFCQ8NFQ6 507 aa13.63□□□□□ -0.23
ARHGEF40-207ENST00000556399 OR11A1Q9GZK7 315 aa13.63□□□□□ -0.23
ARHGEF40-207ENST00000556399 SIP14410 1827 aa13.62□□□□□ -0.23
ARHGEF40-207ENST00000556399 SLC33A1O00400 549 aaPredicted RBP13.62□□□□□ -0.23
ARHGEF40-207ENST00000556399 ACY1Q03154 408 aa13.62□□□□□ -0.23
ARHGEF40-207ENST00000556399 TMEM71Q6P5X7 295 aa13.62□□□□□ -0.23
ARHGEF40-207ENST00000556399 SPACA5Q96QH8 159 aa13.62□□□□□ -0.23
ARHGEF40-207ENST00000556399 CDCA3Q99618 268 aaPredicted RBP13.62□□□□□ -0.23
ARHGEF40-207ENST00000556399 LAT2Q9GZY6 243 aa13.62□□□□□ -0.23
ARHGEF40-207ENST00000556399 NTMQ9P121 344 aa13.62□□□□□ -0.23
ARHGEF40-207ENST00000556399 PRSS44E7EML9 344 aa13.62□□□□□ -0.23
ARHGEF40-207ENST00000556399 PLRG1O43660 514 aaKnown RBP13.62□□□□□ -0.23
ARHGEF40-207ENST00000556399 HLA-DQB1P01920 261 aa13.62□□□□□ -0.23
ARHGEF40-207ENST00000556399 CFIP05156 583 aa13.62□□□□□ -0.23
ARHGEF40-207ENST00000556399 SLC25A1P53007 311 aa13.62□□□□□ -0.23
ARHGEF40-207ENST00000556399 GABREP78334 506 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms