RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 FAM86B1Q8N7N1 296 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 BCORP1Q8N888 145 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 OR10H4Q8NGA5 316 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 OR5M1Q8NGP8 315 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 KCNG3Q8TAE7 436 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 TRMT10AQ8TBZ6 339 aaKnown RBP2.6□□□□□ -1.99
SRP54-209ENST00000555746 MCOLN3Q8TDD5 553 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 NTAN1Q96AB6 310 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 ANKRD9Q96BM1 317 aaPredicted RBP2.6□□□□□ -1.99
SRP54-209ENST00000555746 BIRC7Q96CA5 298 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 C9orf72Q96LT7 481 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 ZNF578Q96N58 590 aaPredicted RBP2.6□□□□□ -1.99
SRP54-209ENST00000555746 RANBP9Q96S59 729 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 TSC22D3Q99576 134 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 NPAS2Q99743 824 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 CTRCQ99895 268 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 C7orf50Q9BRJ6 194 aaKnown RBP2.6□□□□□ -1.99
SRP54-209ENST00000555746 TMEM246Q9BRR3 403 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 NAT9Q9BTE0 207 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 MED10Q9BTT4 135 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 CHRDL1Q9BU40 450 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 HINT2Q9BX68 163 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 NMNAT2Q9BZQ4 307 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 TOLLIPQ9H0E2 274 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 MAGT1Q9H0U3 335 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 SMYD3Q9H7B4 428 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 ELL3Q9HB65 397 aaPredicted RBP2.6□□□□□ -1.99
SRP54-209ENST00000555746 SGK2Q9HBY8 427 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 NRN1Q9NPD7 142 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 ABCC13Q9NSE7 274 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 SAMSN1Q9NSI8 373 aaKnown RBP2.6□□□□□ -1.99
SRP54-209ENST00000555746 PARVAQ9NVD7 372 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 AHSPQ9NZD4 102 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 ADAM22Q9P0K1 906 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 UVRAGQ9P2Y5 699 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 ONECUT1Q9UBC0 465 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 RNF14Q9UBS8 474 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 STOML2Q9UJZ1 356 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 C3orf18Q9UK00 162 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 FLVCR2Q9UPI3 526 aa2.6□□□□□ -1.99
SRP54-209ENST00000555746 EIF3LQ9Y262 564 aaKnown RBP2.6□□□□□ -1.99
SRP54-209ENST00000555746 RBMX2Q9Y388 322 aaKnown RBP2.6□□□□□ -1.99
SRP54-209ENST00000555746 FAM32AQ9Y421 112 aaKnown RBP2.6□□□□□ -1.99
SRP54-209ENST00000555746 ZNF469Q96JG9 3925 aaPredicted RBP2.6□□□□□ -1.99
SRP54-209ENST00000555746 MN1Q10571 1320 aaPredicted RBP2.6□□□□□ -1.99
SRP54-209ENST00000555746 IGHV3OR16-12A0A075B7B8 117 aa2.59□□□□□ -1.99
SRP54-209ENST00000555746 SMCO3A2RU48 225 aa2.59□□□□□ -1.99
SRP54-209ENST00000555746 FBLL1A6NHQ2 334 aaKnown RBP2.59□□□□□ -1.99
SRP54-209ENST00000555746 A8MUA0 341 aa2.59□□□□□ -1.99
SRP54-209ENST00000555746 PRAMEF26H0Y7S4 382 aa2.59□□□□□ -1.99
SRP54-209ENST00000555746 HAS3O00219 553 aa2.59□□□□□ -1.99
SRP54-209ENST00000555746 LAD1O00515 517 aa2.59□□□□□ -1.99
SRP54-209ENST00000555746 DUX1O43812 170 aa2.59□□□□□ -1.99
SRP54-209ENST00000555746 NOS1APO75052 506 aaPredicted RBP2.59□□□□□ -1.99
SRP54-209ENST00000555746 SUPT3HO75486 399 aa2.59□□□□□ -1.99
SRP54-209ENST00000555746 NOL4O94818 638 aa2.59□□□□□ -1.99
SRP54-209ENST00000555746 KBTBD11O94819 623 aa2.59□□□□□ -1.99
SRP54-209ENST00000555746 VENTXO95231 258 aa2.59□□□□□ -1.99
SRP54-209ENST00000555746 DEXIO95424 95 aa2.59□□□□□ -1.99
SRP54-209ENST00000555746 HPP00738 406 aa2.59□□□□□ -1.99
SRP54-209ENST00000555746 FTH1P02794 183 aa2.59□□□□□ -1.99
SRP54-209ENST00000555746 SERPIND1P05546 499 aa2.59□□□□□ -1.99
SRP54-209ENST00000555746 COX5BP10606 129 aa2.59□□□□□ -1.99
SRP54-209ENST00000555746 GFAPP14136 432 aa2.59□□□□□ -1.99
SRP54-209ENST00000555746 MAGP20916 626 aa2.59□□□□□ -1.99
SRP54-209ENST00000555746 TEAD1P28347 426 aa2.59□□□□□ -1.99
SRP54-209ENST00000555746 SAA4P35542 130 aa2.59□□□□□ -1.99
SRP54-209ENST00000555746 CDK9P50750 372 aaKnown RBP2.59□□□□□ -1.99
SRP54-209ENST00000555746 SGSHP51688 502 aa2.59□□□□□ -1.99
SRP54-209ENST00000555746 ACTBP60709 375 aa2.59□□□□□ -1.99
SRP54-209ENST00000555746 MAGOHP61326 146 aaKnown RBP2.59□□□□□ -1.99
SRP54-209ENST00000555746 ARF6P62330 175 aa2.59□□□□□ -1.99
SRP54-209ENST00000555746 ACTA2P62736 377 aa2.59□□□□□ -1.99
SRP54-209ENST00000555746 ACTG1P63261 375 aa2.59□□□□□ -1.99
SRP54-209ENST00000555746 ACTG2P63267 376 aa2.59□□□□□ -1.99
SRP54-209ENST00000555746 ACTC1P68032 377 aa2.59□□□□□ -1.99
SRP54-209ENST00000555746 ACTA1P68133 377 aa2.59□□□□□ -1.99
SRP54-209ENST00000555746 IL9RQ01113 521 aa2.59□□□□□ -1.99
SRP54-209ENST00000555746 BDH1Q02338 343 aa2.59□□□□□ -1.99
SRP54-209ENST00000555746 SEMG2Q02383 582 aa2.59□□□□□ -1.99
SRP54-209ENST00000555746 CHRNB3Q05901 458 aa2.59□□□□□ -1.99
SRP54-209ENST00000555746 FGL1Q08830 312 aa2.59□□□□□ -1.99
SRP54-209ENST00000555746 NME3Q13232 169 aa2.59□□□□□ -1.99
SRP54-209ENST00000555746 STX3Q13277 289 aa2.59□□□□□ -1.99
SRP54-209ENST00000555746 PON3Q15166 354 aa2.59□□□□□ -1.99
SRP54-209ENST00000555746 CD226Q15762 336 aa2.59□□□□□ -1.99
SRP54-209ENST00000555746 TATDN3Q17R31 274 aa2.59□□□□□ -1.99
SRP54-209ENST00000555746 WHAMMP3Q1A5X7 153 aa2.59□□□□□ -1.99
SRP54-209ENST00000555746 C15orf32Q32M92 178 aa2.59□□□□□ -1.99
SRP54-209ENST00000555746 ALKBH6Q3KRA9 238 aa2.59□□□□□ -1.99
SRP54-209ENST00000555746 C14orf28Q4W4Y0 310 aa2.59□□□□□ -1.99
SRP54-209ENST00000555746 AGKQ53H12 422 aa2.59□□□□□ -1.99
SRP54-209ENST00000555746 XKR7Q5GH72 579 aa2.59□□□□□ -1.99
SRP54-209ENST00000555746 C1orf146Q5VVC0 180 aa2.59□□□□□ -1.99
SRP54-209ENST00000555746 KHDRBS2Q5VWX1 349 aaKnown RBP2.59□□□□□ -1.99
SRP54-209ENST00000555746 LIPNQ5VXI9 398 aa2.59□□□□□ -1.99
SRP54-209ENST00000555746 ZSCAN25Q6NSZ9 544 aa2.59□□□□□ -1.99
SRP54-209ENST00000555746 LRRC8BQ6P9F7 803 aa2.59□□□□□ -1.99
SRP54-209ENST00000555746 STOX1Q6ZVD7 989 aa2.59□□□□□ -1.99
SRP54-209ENST00000555746 ABHD12BQ7Z5M8 362 aaPredicted RBP2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms