RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 NDUFS7O75251 213 aa3.59□□□□□ -1.83
VTI1B-203ENST00000554636 SERPINB7O75635 380 aa3.59□□□□□ -1.83
VTI1B-203ENST00000554636 LY6G6DO95868 133 aa3.59□□□□□ -1.83
VTI1B-203ENST00000554636 IGLV1-44P01699 117 aa3.59□□□□□ -1.83
VTI1B-203ENST00000554636 IGHV4-39P01824 125 aa3.59□□□□□ -1.83
VTI1B-203ENST00000554636 HEXAP06865 529 aa3.59□□□□□ -1.83
VTI1B-203ENST00000554636 FGF2P09038 288 aa3.59□□□□□ -1.83
VTI1B-203ENST00000554636 TROVE2P10155 538 aaKnown RBP eCLIP3.59□□□□□ -1.83
VTI1B-203ENST00000554636 CBLP22681 906 aa3.59□□□□□ -1.83
VTI1B-203ENST00000554636 PTAFRP25105 342 aa3.59□□□□□ -1.83
VTI1B-203ENST00000554636 GTF2E2P29084 291 aaKnown RBP3.59□□□□□ -1.83
VTI1B-203ENST00000554636 TTKP33981 857 aa3.59□□□□□ -1.83
VTI1B-203ENST00000554636 CDKN1AP38936 164 aa3.59□□□□□ -1.83
VTI1B-203ENST00000554636 CDH12P55289 794 aa3.59□□□□□ -1.83
VTI1B-203ENST00000554636 TUBA1BP68363 451 aa3.59□□□□□ -1.83
VTI1B-203ENST00000554636 ROR2Q01974 943 aaKnown RBP3.59□□□□□ -1.83
VTI1B-203ENST00000554636 SF3A3Q12874 501 aaKnown RBP eCLIP3.59□□□□□ -1.83
VTI1B-203ENST00000554636 ZNF74Q16587 644 aa3.59□□□□□ -1.83
VTI1B-203ENST00000554636 KRTAP21-3Q3LHN1 58 aa3.59□□□□□ -1.83
VTI1B-203ENST00000554636 HIKESHIQ53FT3 197 aa3.59□□□□□ -1.83
VTI1B-203ENST00000554636 KLHL22Q53GT1 634 aa3.59□□□□□ -1.83
VTI1B-203ENST00000554636 ENTPD8Q5MY95 495 aa3.59□□□□□ -1.83
VTI1B-203ENST00000554636 PHYHD1Q5SRE7 291 aa3.59□□□□□ -1.83
VTI1B-203ENST00000554636 C1QTNF12Q5T7M4 302 aa3.59□□□□□ -1.83
VTI1B-203ENST00000554636 TMEM225Q6GV28 225 aa3.59□□□□□ -1.83
VTI1B-203ENST00000554636 OR7E24Q6IFN5 339 aa3.59□□□□□ -1.83
VTI1B-203ENST00000554636 NANOGP8Q6NSW7 305 aa3.59□□□□□ -1.83
VTI1B-203ENST00000554636 ZNF613Q6PF04 617 aa3.59□□□□□ -1.83
VTI1B-203ENST00000554636 ULK3Q6PHR2 472 aa3.59□□□□□ -1.83
VTI1B-203ENST00000554636 KLHL17Q6TDP4 642 aa3.59□□□□□ -1.83
VTI1B-203ENST00000554636 DNM1P46Q6ZS02 220 aa3.59□□□□□ -1.83
VTI1B-203ENST00000554636 TUBA1AQ71U36 451 aa3.59□□□□□ -1.83
VTI1B-203ENST00000554636 MEPCEQ7L2J0 689 aaKnown RBP3.59□□□□□ -1.83
VTI1B-203ENST00000554636 SLC46A3Q7Z3Q1 461 aa3.59□□□□□ -1.83
VTI1B-203ENST00000554636 ABHD12BQ7Z5M8 362 aaPredicted RBP3.59□□□□□ -1.83
VTI1B-203ENST00000554636 PATL1Q86TB9 770 aaKnown RBP3.59□□□□□ -1.83
VTI1B-203ENST00000554636 RANBP3LQ86VV4 465 aaPredicted RBP3.59□□□□□ -1.83
VTI1B-203ENST00000554636 SNX32Q86XE0 403 aa3.59□□□□□ -1.83
VTI1B-203ENST00000554636 SLC30A8Q8IWU4 369 aa3.59□□□□□ -1.83
VTI1B-203ENST00000554636 TMEM123Q8N131 208 aa3.59□□□□□ -1.83
VTI1B-203ENST00000554636 SCAIQ8N9R8 606 aa3.59□□□□□ -1.83
VTI1B-203ENST00000554636 OR8J3Q8NGG0 315 aa3.59□□□□□ -1.83
VTI1B-203ENST00000554636 VANGL1Q8TAA9 524 aaPredicted RBP3.59□□□□□ -1.83
VTI1B-203ENST00000554636 MAGEE2Q8TD90 523 aaPredicted RBP3.59□□□□□ -1.83
VTI1B-203ENST00000554636 BCL2L2Q92843 193 aaPredicted RBP3.59□□□□□ -1.83
VTI1B-203ENST00000554636 MUL1Q969V5 352 aa3.59□□□□□ -1.83
VTI1B-203ENST00000554636 LRRC58Q96CX6 371 aa3.59□□□□□ -1.83
VTI1B-203ENST00000554636 MSI2Q96DH6 328 aaKnown RBP3.59□□□□□ -1.83
VTI1B-203ENST00000554636 MUCL1Q96DR8 90 aa3.59□□□□□ -1.83
VTI1B-203ENST00000554636 SLC47A1Q96FL8 570 aa3.59□□□□□ -1.83
VTI1B-203ENST00000554636 RADILQ96JH8 1075 aa3.59□□□□□ -1.83
VTI1B-203ENST00000554636 OXGR1Q96P68 337 aa3.59□□□□□ -1.83
VTI1B-203ENST00000554636 ZNF317Q96PQ6 595 aaPredicted RBP3.59□□□□□ -1.83
VTI1B-203ENST00000554636 OR2M2Q96R28 347 aa3.59□□□□□ -1.83
VTI1B-203ENST00000554636 ZNF347Q96SE7 839 aa3.59□□□□□ -1.83
VTI1B-203ENST00000554636 ZNF607Q96SK3 696 aa3.59□□□□□ -1.83
VTI1B-203ENST00000554636 EPYCQ99645 322 aa3.59□□□□□ -1.83
VTI1B-203ENST00000554636 MCHR1Q99705 422 aa3.59□□□□□ -1.83
VTI1B-203ENST00000554636 DHRS9Q9BPW9 319 aa3.59□□□□□ -1.83
VTI1B-203ENST00000554636 PRSS27Q9BQR3 290 aa3.59□□□□□ -1.83
VTI1B-203ENST00000554636 ZNF426Q9BUY5 554 aa3.59□□□□□ -1.83
VTI1B-203ENST00000554636 C1QTNF6Q9BXI9 259 aa3.59□□□□□ -1.83
VTI1B-203ENST00000554636 NANOGQ9H9S0 305 aa3.59□□□□□ -1.83
VTI1B-203ENST00000554636 TMEM27Q9HBJ8 222 aa3.59□□□□□ -1.83
VTI1B-203ENST00000554636 OBP2BQ9NPH6 170 aa3.59□□□□□ -1.83
VTI1B-203ENST00000554636 MRPL39Q9NYK5 338 aaKnown RBP3.59□□□□□ -1.83
VTI1B-203ENST00000554636 CISD1Q9NZ45 108 aaKnown RBP3.59□□□□□ -1.83
VTI1B-203ENST00000554636 RPS6KB2Q9UBS0 482 aa3.59□□□□□ -1.83
VTI1B-203ENST00000554636 SLC13A4Q9UKG4 626 aa3.59□□□□□ -1.83
VTI1B-203ENST00000554636 MGAT4BQ9UQ53 548 aa3.59□□□□□ -1.83
VTI1B-203ENST00000554636 B3GALT5Q9Y2C3 310 aa3.59□□□□□ -1.83
VTI1B-203ENST00000554636 CHD3Q12873 2000 aaKnown RBP3.59□□□□□ -1.83
VTI1B-203ENST00000554636 YLPM1P49750 1951 aaKnown RBP3.58□□□□□ -1.84
VTI1B-203ENST00000554636 JMJD1CQ15652 2540 aa3.58□□□□□ -1.84
VTI1B-203ENST00000554636 TRAPPC13A5PLN9 417 aa3.58□□□□□ -1.84
VTI1B-203ENST00000554636 CXorf65A6NEN9 183 aa3.58□□□□□ -1.84
VTI1B-203ENST00000554636 FAM90A8PA6NJQ4 464 aa3.58□□□□□ -1.84
VTI1B-203ENST00000554636 OR6C65A6NJZ3 312 aa3.58□□□□□ -1.84
VTI1B-203ENST00000554636 ATP6V1G2-DDX39BF2Z307 99 aa3.58□□□□□ -1.84
VTI1B-203ENST00000554636 MS4A18H0YCH9 400 aa3.58□□□□□ -1.84
VTI1B-203ENST00000554636 PLPP3O14495 311 aa3.58□□□□□ -1.84
VTI1B-203ENST00000554636 MRASO14807 208 aa3.58□□□□□ -1.84
VTI1B-203ENST00000554636 SLC22A2O15244 555 aa3.58□□□□□ -1.84
VTI1B-203ENST00000554636 SEC14L2O76054 403 aa3.58□□□□□ -1.84
VTI1B-203ENST00000554636 MT-ATP6P00846 226 aa3.58□□□□□ -1.84
VTI1B-203ENST00000554636 IGKV3-15P01624 115 aa3.58□□□□□ -1.84
VTI1B-203ENST00000554636 VIMP08670 466 aaKnown RBP3.58□□□□□ -1.84
VTI1B-203ENST00000554636 FAM90A13PP0C7W8 464 aa3.58□□□□□ -1.84
VTI1B-203ENST00000554636 FAM90A24PP0C7X0 464 aa3.58□□□□□ -1.84
VTI1B-203ENST00000554636 CECR9P0C854 216 aa3.58□□□□□ -1.84
VTI1B-203ENST00000554636 HLA-DOBP13765 273 aa3.58□□□□□ -1.84
VTI1B-203ENST00000554636 ZNF43P17038 809 aa3.58□□□□□ -1.84
VTI1B-203ENST00000554636 CDH2P19022 906 aaPredicted RBP3.58□□□□□ -1.84
VTI1B-203ENST00000554636 CALCRP30988 508 aa3.58□□□□□ -1.84
VTI1B-203ENST00000554636 ACVR1BP36896 505 aa3.58□□□□□ -1.84
VTI1B-203ENST00000554636 MDH1P40925 334 aaKnown RBP3.58□□□□□ -1.84
VTI1B-203ENST00000554636 UGT2B15P54855 530 aa3.58□□□□□ -1.84
VTI1B-203ENST00000554636 SH3BGRP55822 239 aaPredicted RBP3.58□□□□□ -1.84
VTI1B-203ENST00000554636 P2RX3P56373 397 aa3.58□□□□□ -1.84
VTI1B-203ENST00000554636 PRPS1P60891 318 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms