RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 HIST1H1CP16403 213 aaKnown RBP9.15□□□□□ -0.94
SHMT2-213ENST00000554600 USF1P22415 310 aaPredicted RBP9.15□□□□□ -0.94
SHMT2-213ENST00000554600 MAGEA2P43356 314 aa9.15□□□□□ -0.94
SHMT2-213ENST00000554600 HTR5AP47898 357 aa9.15□□□□□ -0.94
SHMT2-213ENST00000554600 PPP1CBP62140 327 aa9.15□□□□□ -0.94
SHMT2-213ENST00000554600 FLOT2Q14254 428 aa9.15□□□□□ -0.94
SHMT2-213ENST00000554600 TMEM249Q2WGJ8 235 aa9.15□□□□□ -0.94
SHMT2-213ENST00000554600 ZNF718Q3SXZ3 478 aa9.15□□□□□ -0.94
SHMT2-213ENST00000554600 TMEM154Q6P9G4 183 aa9.15□□□□□ -0.94
SHMT2-213ENST00000554600 ARL9Q6T311 187 aa9.15□□□□□ -0.94
SHMT2-213ENST00000554600 ZNF620Q6ZNG0 422 aa9.15□□□□□ -0.94
SHMT2-213ENST00000554600 SYT9Q86SS6 491 aa9.15□□□□□ -0.94
SHMT2-213ENST00000554600 SPATA24Q86W54 205 aa9.15□□□□□ -0.94
SHMT2-213ENST00000554600 AQP11Q8NBQ7 271 aa9.15□□□□□ -0.94
SHMT2-213ENST00000554600 SDR9C7Q8NEX9 313 aa9.15□□□□□ -0.94
SHMT2-213ENST00000554600 POP5Q969H6 163 aaKnown RBP9.15□□□□□ -0.94
SHMT2-213ENST00000554600 POM121L2Q96KW2 1035 aa9.15□□□□□ -0.94
SHMT2-213ENST00000554600 NMNAT3Q96T66 252 aa9.15□□□□□ -0.94
SHMT2-213ENST00000554600 BTBD10Q9BSF8 475 aa9.15□□□□□ -0.94
SHMT2-213ENST00000554600 FN3KQ9H479 309 aa9.15□□□□□ -0.94
SHMT2-213ENST00000554600 EGLN3Q9H6Z9 239 aa9.15□□□□□ -0.94
SHMT2-213ENST00000554600 ELOVL3Q9HB03 270 aa9.15□□□□□ -0.94
SHMT2-213ENST00000554600 RPRD1BQ9NQG5 326 aaKnown RBP9.15□□□□□ -0.94
SHMT2-213ENST00000554600 TBC1D23Q9NUY8 699 aa9.15□□□□□ -0.94
SHMT2-213ENST00000554600 SLCO1C1Q9NYB5 712 aa9.15□□□□□ -0.94
SHMT2-213ENST00000554600 ASH2LQ9UBL3 628 aa9.15□□□□□ -0.94
SHMT2-213ENST00000554600 NDRG4Q9ULP0 352 aaKnown RBP9.15□□□□□ -0.94
SHMT2-213ENST00000554600 CDH10Q9Y6N8 788 aa9.15□□□□□ -0.94
SHMT2-213ENST00000554600 ARPC3O15145 178 aa9.14□□□□□ -0.95
SHMT2-213ENST00000554600 CD5LO43866 347 aa9.14□□□□□ -0.95
SHMT2-213ENST00000554600 ABHD16AO95870 558 aa9.14□□□□□ -0.95
SHMT2-213ENST00000554600 CST1P01037 141 aa9.14□□□□□ -0.95
SHMT2-213ENST00000554600 GASTP01350 101 aa9.14□□□□□ -0.95
SHMT2-213ENST00000554600 MT-ND5P03915 603 aa9.14□□□□□ -0.95
SHMT2-213ENST00000554600 ZNF250P15622 560 aa9.14□□□□□ -0.95
SHMT2-213ENST00000554600 WNT5AP41221 380 aa9.14□□□□□ -0.95
SHMT2-213ENST00000554600 NR4A2P43354 598 aa9.14□□□□□ -0.95
SHMT2-213ENST00000554600 ERFP50548 548 aa9.14□□□□□ -0.95
SHMT2-213ENST00000554600 ARHGDIAP52565 204 aa9.14□□□□□ -0.95
SHMT2-213ENST00000554600 KRTAP1-1Q07627 177 aa9.14□□□□□ -0.95
SHMT2-213ENST00000554600 LOXL1Q08397 574 aaPredicted RBP9.14□□□□□ -0.95
SHMT2-213ENST00000554600 TRAP1Q12931 704 aaKnown RBP9.14□□□□□ -0.95
SHMT2-213ENST00000554600 AQP6Q13520 282 aa9.14□□□□□ -0.95
SHMT2-213ENST00000554600 MOGQ16653 247 aa9.14□□□□□ -0.95
SHMT2-213ENST00000554600 MEP1BQ16820 701 aa9.14□□□□□ -0.95
SHMT2-213ENST00000554600 RPL13AP3Q6NVV1 102 aa9.14□□□□□ -0.95
SHMT2-213ENST00000554600 RFPL4BQ6ZWI9 263 aa9.14□□□□□ -0.95
SHMT2-213ENST00000554600 ZNF101Q8IZC7 436 aa9.14□□□□□ -0.95
SHMT2-213ENST00000554600 ZNF540Q8NDQ6 660 aa9.14□□□□□ -0.95
SHMT2-213ENST00000554600 OR52E2Q8NGJ4 325 aa9.14□□□□□ -0.95
SHMT2-213ENST00000554600 SLC25A40Q8TBP6 338 aa9.14□□□□□ -0.95
SHMT2-213ENST00000554600 C4orf45Q96LM5 186 aa9.14□□□□□ -0.95
SHMT2-213ENST00000554600 WACQ9BTA9 647 aa9.14□□□□□ -0.95
SHMT2-213ENST00000554600 BPESC1Q9GZL8 116 aa9.14□□□□□ -0.95
SHMT2-213ENST00000554600 HINT3Q9NQE9 182 aaKnown RBP9.14□□□□□ -0.95
SHMT2-213ENST00000554600 VNN3Q9NY84 501 aa9.14□□□□□ -0.95
SHMT2-213ENST00000554600 B9D1Q9UPM9 204 aa9.14□□□□□ -0.95
SHMT2-213ENST00000554600 GRIP1Q9Y3R0 1128 aa9.14□□□□□ -0.95
SHMT2-213ENST00000554600 ARHGAP32A7KAX9 2087 aa9.13□□□□□ -0.95
SHMT2-213ENST00000554600 A0A096LNT2 108 aa9.13□□□□□ -0.95
SHMT2-213ENST00000554600 PLSCR5A0PG75 271 aa9.13□□□□□ -0.95
SHMT2-213ENST00000554600 DHRS12A0PJE2 317 aa9.13□□□□□ -0.95
SHMT2-213ENST00000554600 AQP12BA6NM10 295 aa9.13□□□□□ -0.95
SHMT2-213ENST00000554600 DCTN6O00399 190 aa9.13□□□□□ -0.95
SHMT2-213ENST00000554600 TLX2O43763 284 aaPredicted RBP9.13□□□□□ -0.95
SHMT2-213ENST00000554600 IDH3BO43837 385 aa9.13□□□□□ -0.95
SHMT2-213ENST00000554600 E2F6O75461 281 aa9.13□□□□□ -0.95
SHMT2-213ENST00000554600 DNAJC8O75937 253 aaPredicted RBP9.13□□□□□ -0.95
SHMT2-213ENST00000554600 SOX14O95416 240 aa9.13□□□□□ -0.95
SHMT2-213ENST00000554600 NGFP01138 241 aa9.13□□□□□ -0.95
SHMT2-213ENST00000554600 HPXP02790 462 aa9.13□□□□□ -0.95
SHMT2-213ENST00000554600 IGFBP1P08833 259 aaPredicted RBP9.13□□□□□ -0.95
SHMT2-213ENST00000554600 GSTM3P21266 225 aa9.13□□□□□ -0.95
SHMT2-213ENST00000554600 MPV17P39210 176 aa9.13□□□□□ -0.95
SHMT2-213ENST00000554600 HMGA2P52926 109 aa9.13□□□□□ -0.95
SHMT2-213ENST00000554600 LSM6P62312 80 aaKnown RBP9.13□□□□□ -0.95
SHMT2-213ENST00000554600 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.13□□□□□ -0.95
SHMT2-213ENST00000554600 DBPQ10586 325 aaPredicted RBP9.13□□□□□ -0.95
SHMT2-213ENST00000554600 MICAQ29983 383 aa9.13□□□□□ -0.95
SHMT2-213ENST00000554600 SLC36A3Q495N2 470 aa9.13□□□□□ -0.95
SHMT2-213ENST00000554600 CYB5R2Q6BCY4 276 aa9.13□□□□□ -0.95
SHMT2-213ENST00000554600 PGM2L1Q6PCE3 622 aa9.13□□□□□ -0.95
SHMT2-213ENST00000554600 RASSF6Q6ZTQ3 369 aa9.13□□□□□ -0.95
SHMT2-213ENST00000554600 VASH1Q7L8A9 365 aaPredicted RBP9.13□□□□□ -0.95
SHMT2-213ENST00000554600 AQP12AQ8IXF9 295 aa9.13□□□□□ -0.95
SHMT2-213ENST00000554600 ADGRG5Q8IZF4 528 aa9.13□□□□□ -0.95
SHMT2-213ENST00000554600 OR6V1Q8N148 313 aa9.13□□□□□ -0.95
SHMT2-213ENST00000554600 ZNF786Q8N393 782 aa9.13□□□□□ -0.95
SHMT2-213ENST00000554600 CYB561A3Q8NBI2 242 aa9.13□□□□□ -0.95
SHMT2-213ENST00000554600 OR10G2Q8NGC3 310 aa9.13□□□□□ -0.95
SHMT2-213ENST00000554600 OR4C15Q8NGM1 316 aa9.13□□□□□ -0.95
SHMT2-213ENST00000554600 GIPC3Q8TF64 312 aa9.13□□□□□ -0.95
SHMT2-213ENST00000554600 CANT1Q8WVQ1 401 aa9.13□□□□□ -0.95
SHMT2-213ENST00000554600 IPCEF1Q8WWN9 437 aaPredicted RBP9.13□□□□□ -0.95
SHMT2-213ENST00000554600 SLC7A6Q92536 515 aa9.13□□□□□ -0.95
SHMT2-213ENST00000554600 CHID1Q9BWS9 393 aa9.13□□□□□ -0.95
SHMT2-213ENST00000554600 CDADC1Q9BWV3 514 aa9.13□□□□□ -0.95
SHMT2-213ENST00000554600 TSSK6Q9BXA6 273 aa9.13□□□□□ -0.95
SHMT2-213ENST00000554600 PLA2G12AQ9BZM1 189 aa9.13□□□□□ -0.95
SHMT2-213ENST00000554600 OR2J1Q9GZK6 312 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms