RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 ARPC3O15145 178 aa5.54□□□□□ -1.52
SCFD1-212ENST00000554486 IDH3BO43837 385 aa5.54□□□□□ -1.52
SCFD1-212ENST00000554486 SERPINI2O75830 405 aa5.54□□□□□ -1.52
SCFD1-212ENST00000554486 VAMP5O95183 116 aa5.54□□□□□ -1.52
SCFD1-212ENST00000554486 SLC2A10O95528 541 aa5.54□□□□□ -1.52
SCFD1-212ENST00000554486 CLIC3O95833 236 aa5.54□□□□□ -1.52
SCFD1-212ENST00000554486 TXNDC12O95881 172 aa5.54□□□□□ -1.52
SCFD1-212ENST00000554486 PLGP00747 810 aaPredicted RBP5.54□□□□□ -1.52
SCFD1-212ENST00000554486 HOXD4P09016 255 aaPredicted RBP5.54□□□□□ -1.52
SCFD1-212ENST00000554486 GNAO1P09471 354 aa5.54□□□□□ -1.52
SCFD1-212ENST00000554486 APEHP13798 732 aaKnown RBP5.54□□□□□ -1.52
SCFD1-212ENST00000554486 HIST1H1CP16403 213 aaKnown RBP5.54□□□□□ -1.52
SCFD1-212ENST00000554486 ZNF43P17038 809 aa5.54□□□□□ -1.52
SCFD1-212ENST00000554486 AHCYP23526 432 aa5.54□□□□□ -1.52
SCFD1-212ENST00000554486 GRK5P34947 590 aa5.54□□□□□ -1.52
SCFD1-212ENST00000554486 PTGER4P35408 488 aa5.54□□□□□ -1.52
SCFD1-212ENST00000554486 GGT2P36268 569 aa5.54□□□□□ -1.52
SCFD1-212ENST00000554486 CAPGP40121 348 aa5.54□□□□□ -1.52
SCFD1-212ENST00000554486 CDKN2AP42771 156 aaKnown RBP5.54□□□□□ -1.52
SCFD1-212ENST00000554486 PTH2RP49190 550 aa5.54□□□□□ -1.52
SCFD1-212ENST00000554486 SMSP52788 366 aa5.54□□□□□ -1.52
SCFD1-212ENST00000554486 CLDN17P56750 224 aa5.54□□□□□ -1.52
SCFD1-212ENST00000554486 RPL27P61353 136 aaKnown RBP5.54□□□□□ -1.52
SCFD1-212ENST00000554486 EFNB1P98172 346 aa5.54□□□□□ -1.52
SCFD1-212ENST00000554486 POU3F1Q03052 451 aaPredicted RBP5.54□□□□□ -1.52
SCFD1-212ENST00000554486 RBPJQ06330 500 aa5.54□□□□□ -1.52
SCFD1-212ENST00000554486 RUNX1T1Q06455 604 aa5.54□□□□□ -1.52
SCFD1-212ENST00000554486 MELKQ14680 651 aa5.54□□□□□ -1.52
SCFD1-212ENST00000554486 PDK3Q15120 406 aa5.54□□□□□ -1.52
SCFD1-212ENST00000554486 RNPS1Q15287 305 aaKnown RBP5.54□□□□□ -1.52
SCFD1-212ENST00000554486 GUSBP1Q15486 140 aa5.54□□□□□ -1.52
SCFD1-212ENST00000554486 ACKR1Q16570 336 aa5.54□□□□□ -1.52
SCFD1-212ENST00000554486 C6orf52Q5T4I8 152 aa5.54□□□□□ -1.52
SCFD1-212ENST00000554486 C1orf185Q5T7R7 199 aa5.54□□□□□ -1.52
SCFD1-212ENST00000554486 GPR139Q6DWJ6 353 aa5.54□□□□□ -1.52
SCFD1-212ENST00000554486 SLC27A4Q6P1M0 643 aa5.54□□□□□ -1.52
SCFD1-212ENST00000554486 PTCHD4Q6ZW05 846 aa5.54□□□□□ -1.52
SCFD1-212ENST00000554486 SLC35D2Q76EJ3 337 aa5.54□□□□□ -1.52
SCFD1-212ENST00000554486 P4HA3Q7Z4N8 544 aa5.54□□□□□ -1.52
SCFD1-212ENST00000554486 GPAT4Q86UL3 456 aa5.54□□□□□ -1.52
SCFD1-212ENST00000554486 ZNF575Q86XF7 245 aa5.54□□□□□ -1.52
SCFD1-212ENST00000554486 UEVLDQ8IX04 471 aa5.54□□□□□ -1.52
SCFD1-212ENST00000554486 ZNF843Q8N446 348 aa5.54□□□□□ -1.52
SCFD1-212ENST00000554486 MARVELD2Q8N4S9 558 aa5.54□□□□□ -1.52
SCFD1-212ENST00000554486 ARIH2OSQ8N7S6 290 aa5.54□□□□□ -1.52
SCFD1-212ENST00000554486 NPEPL1Q8NDH3 523 aa5.54□□□□□ -1.52
SCFD1-212ENST00000554486 OR2T33Q8NG76 320 aa5.54□□□□□ -1.52
SCFD1-212ENST00000554486 RASD2Q96D21 266 aa5.54□□□□□ -1.52
SCFD1-212ENST00000554486 ERMAPQ96PL5 475 aaPredicted RBP5.54□□□□□ -1.52
SCFD1-212ENST00000554486 ZNF385AQ96PM9 386 aaKnown RBP5.54□□□□□ -1.52
SCFD1-212ENST00000554486 TSPAN32Q96QS1 320 aa5.54□□□□□ -1.52
SCFD1-212ENST00000554486 DDOQ99489 341 aa5.54□□□□□ -1.52
SCFD1-212ENST00000554486 ZNF184Q99676 751 aaPredicted RBP5.54□□□□□ -1.52
SCFD1-212ENST00000554486 EMC6Q9BV81 110 aa5.54□□□□□ -1.52
SCFD1-212ENST00000554486 POLDIP3Q9BY77 421 aaKnown RBP5.54□□□□□ -1.52
SCFD1-212ENST00000554486 PRRG4Q9BZD6 226 aa5.54□□□□□ -1.52
SCFD1-212ENST00000554486 NDEL1Q9GZM8 345 aa5.54□□□□□ -1.52
SCFD1-212ENST00000554486 TRIM36Q9NQ86 728 aa5.54□□□□□ -1.52
SCFD1-212ENST00000554486 MED29Q9NX70 200 aa5.54□□□□□ -1.52
SCFD1-212ENST00000554486 KLHL9Q9P2J3 617 aa5.54□□□□□ -1.52
SCFD1-212ENST00000554486 ENOPH1Q9UHY7 261 aa5.54□□□□□ -1.52
SCFD1-212ENST00000554486 ZNF346Q9UL40 294 aaKnown RBP5.54□□□□□ -1.52
SCFD1-212ENST00000554486 CLEC4AQ9UMR7 237 aa5.54□□□□□ -1.52
SCFD1-212ENST00000554486 BAIAP2Q9UQB8 552 aa5.54□□□□□ -1.52
SCFD1-212ENST00000554486 FLVCR1Q9Y5Y0 555 aa5.54□□□□□ -1.52
SCFD1-212ENST00000554486 ZNF724A8MTY0 619 aa5.53□□□□□ -1.52
SCFD1-212ENST00000554486 SURF4O15260 269 aa5.53□□□□□ -1.52
SCFD1-212ENST00000554486 TPD52L2O43399 206 aaKnown RBP5.53□□□□□ -1.52
SCFD1-212ENST00000554486 PRKYO43930 277 aa5.53□□□□□ -1.52
SCFD1-212ENST00000554486 SS18L1O75177 396 aaPredicted RBP5.53□□□□□ -1.52
SCFD1-212ENST00000554486 TRMUO75648 421 aaKnown RBP5.53□□□□□ -1.52
SCFD1-212ENST00000554486 ZNF432O94892 652 aa5.53□□□□□ -1.52
SCFD1-212ENST00000554486 TOXO94900 526 aa5.53□□□□□ -1.52
SCFD1-212ENST00000554486 TNFRSF6BO95407 300 aa5.53□□□□□ -1.52
SCFD1-212ENST00000554486 BCL10O95999 233 aa5.53□□□□□ -1.52
SCFD1-212ENST00000554486 STSP08842 583 aa5.53□□□□□ -1.52
SCFD1-212ENST00000554486 FCGR2AP12318 317 aa5.53□□□□□ -1.52
SCFD1-212ENST00000554486 ACADSP16219 412 aa5.53□□□□□ -1.52
SCFD1-212ENST00000554486 EDNRAP25101 427 aa5.53□□□□□ -1.52
SCFD1-212ENST00000554486 CEACAM8P31997 349 aaPredicted RBP5.53□□□□□ -1.52
SCFD1-212ENST00000554486 TIMP3P35625 211 aa5.53□□□□□ -1.52
SCFD1-212ENST00000554486 ACVR1BP36896 505 aa5.53□□□□□ -1.52
SCFD1-212ENST00000554486 HSPA13P48723 471 aa5.53□□□□□ -1.52
SCFD1-212ENST00000554486 PCYT1AP49585 367 aa5.53□□□□□ -1.52
SCFD1-212ENST00000554486 RPS6KA3P51812 740 aa5.53□□□□□ -1.52
SCFD1-212ENST00000554486 BIDP55957 195 aa5.53□□□□□ -1.52
SCFD1-212ENST00000554486 MYBPC1Q00872 1141 aa5.53□□□□□ -1.52
SCFD1-212ENST00000554486 LGALS3BPQ08380 585 aa5.53□□□□□ -1.52
SCFD1-212ENST00000554486 FOXF2Q12947 444 aa5.53□□□□□ -1.52
SCFD1-212ENST00000554486 CAMK2DQ13557 499 aa5.53□□□□□ -1.52
SCFD1-212ENST00000554486 KRR1Q13601 381 aaKnown RBP5.53□□□□□ -1.52
SCFD1-212ENST00000554486 C1DQ13901 141 aaKnown RBP5.53□□□□□ -1.52
SCFD1-212ENST00000554486 SF3B4Q15427 424 aaKnown RBP eCLIP5.53□□□□□ -1.523e-7■■■■□ 26.2
SCFD1-212ENST00000554486 TAF11Q15544 211 aa5.53□□□□□ -1.52
SCFD1-212ENST00000554486 IGFBP7Q16270 282 aa5.53□□□□□ -1.52
SCFD1-212ENST00000554486 MESTQ5EB52 335 aa5.53□□□□□ -1.52
SCFD1-212ENST00000554486 RNASE12Q5GAN4 147 aaKnown RBP5.53□□□□□ -1.52
SCFD1-212ENST00000554486 PLAC9Q5JTB6 97 aa5.53□□□□□ -1.52
SCFD1-212ENST00000554486 EEF1A1P5Q5VTE0 462 aa5.53□□□□□ -1.52
SCFD1-212ENST00000554486 ZNF691Q5VV52 312 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms