RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 EMC3Q9P0I2 261 aa2.62□□□□□ -1.99
SLIRP-202ENST00000553981 TAAR3PQ9P1P4 343 aa2.62□□□□□ -1.99
SLIRP-202ENST00000553981 NFU1Q9UMS0 254 aa2.62□□□□□ -1.99
SLIRP-202ENST00000553981 SLC9A8Q9Y2E8 581 aa2.62□□□□□ -1.99
SLIRP-202ENST00000553981 WBP11Q9Y2W2 641 aaKnown RBP2.62□□□□□ -1.99
SLIRP-202ENST00000553981 UTP11Q9Y3A2 253 aaKnown RBP2.62□□□□□ -1.99
SLIRP-202ENST00000553981 WDR45Q9Y484 360 aa2.62□□□□□ -1.99
SLIRP-202ENST00000553981 DSPPQ9NZW4 1301 aa2.62□□□□□ -1.99
SLIRP-202ENST00000553981 WNK2Q9Y3S1 2297 aa2.62□□□□□ -1.99
SLIRP-202ENST00000553981 TENM1Q9UKZ4 2725 aa2.62□□□□□ -1.99
SLIRP-202ENST00000553981 WNK1Q9H4A3 2382 aa2.61□□□□□ -1.99
SLIRP-202ENST00000553981 LOC100509620A0A075B734 347 aa2.61□□□□□ -1.99
SLIRP-202ENST00000553981 A0A087WUV0 522 aaPredicted RBP2.61□□□□□ -1.99
SLIRP-202ENST00000553981 A0A1B0GUV1 79 aa2.61□□□□□ -1.99
SLIRP-202ENST00000553981 EXOC1LA0A1B0GW35 172 aa2.61□□□□□ -1.99
SLIRP-202ENST00000553981 ZSCAN5BA6NJL1 495 aa2.61□□□□□ -1.99
SLIRP-202ENST00000553981 C17orf100A8MU93 164 aa2.61□□□□□ -1.99
SLIRP-202ENST00000553981 ZNF99A8MXY4 864 aaPredicted RBP2.61□□□□□ -1.99
SLIRP-202ENST00000553981 ZNF587BE7ETH6 402 aa2.61□□□□□ -1.99
SLIRP-202ENST00000553981 F5H0A9 414 aaPredicted RBP2.61□□□□□ -1.99
SLIRP-202ENST00000553981 M0R3G1 203 aa2.61□□□□□ -1.99
SLIRP-202ENST00000553981 RHODO00212 210 aa2.61□□□□□ -1.99
SLIRP-202ENST00000553981 FAAHO00519 579 aa2.61□□□□□ -1.99
SLIRP-202ENST00000553981 TM9SF1O15321 606 aa2.61□□□□□ -1.99
SLIRP-202ENST00000553981 DNPH1O43598 174 aa2.61□□□□□ -1.99
SLIRP-202ENST00000553981 SYNGR3O43761 229 aa2.61□□□□□ -1.99
SLIRP-202ENST00000553981 SPAG7O75391 227 aa2.61□□□□□ -1.99
SLIRP-202ENST00000553981 HSPA4LO95757 839 aa2.61□□□□□ -1.99
SLIRP-202ENST00000553981 IGHV1-46P01743 117 aa2.61□□□□□ -1.99
SLIRP-202ENST00000553981 IGHV2-70P01814 119 aa2.61□□□□□ -1.99
SLIRP-202ENST00000553981 CRYAAP02489 173 aa2.61□□□□□ -1.99
SLIRP-202ENST00000553981 TFP02787 698 aa2.61□□□□□ -1.99
SLIRP-202ENST00000553981 BGLAPP02818 100 aa2.61□□□□□ -1.99
SLIRP-202ENST00000553981 GUSBP08236 651 aa2.61□□□□□ -1.99
SLIRP-202ENST00000553981 ABHD2P08910 425 aa2.61□□□□□ -1.99
SLIRP-202ENST00000553981 MMP7P09237 267 aaPredicted RBP2.61□□□□□ -1.99
SLIRP-202ENST00000553981 TFPTP0C1Z6 253 aa2.61□□□□□ -1.99
SLIRP-202ENST00000553981 MYL2P10916 166 aa2.61□□□□□ -1.99
SLIRP-202ENST00000553981 ETFAP13804 333 aa2.61□□□□□ -1.99
SLIRP-202ENST00000553981 CPA3P15088 417 aa2.61□□□□□ -1.99
SLIRP-202ENST00000553981 ZNF250P15622 560 aa2.61□□□□□ -1.99
SLIRP-202ENST00000553981 SELEP16581 610 aa2.61□□□□□ -1.99
SLIRP-202ENST00000553981 ZNF12P17014 697 aa2.61□□□□□ -1.99
SLIRP-202ENST00000553981 GRPRP30550 384 aa2.61□□□□□ -1.99
SLIRP-202ENST00000553981 CD80P33681 288 aa2.61□□□□□ -1.99
SLIRP-202ENST00000553981 PHBP35232 272 aa2.61□□□□□ -1.99
SLIRP-202ENST00000553981 SOAT1P35610 550 aa2.61□□□□□ -1.99
SLIRP-202ENST00000553981 PMELP40967 661 aa2.61□□□□□ -1.99
SLIRP-202ENST00000553981 SLC1A3P43003 542 aa2.61□□□□□ -1.99
SLIRP-202ENST00000553981 CRYBB2P43320 205 aa2.61□□□□□ -1.99
SLIRP-202ENST00000553981 EVX1P49640 407 aa2.61□□□□□ -1.99
SLIRP-202ENST00000553981 CLK1P49759 484 aaKnown RBP2.61□□□□□ -1.99
SLIRP-202ENST00000553981 MMP15P51511 669 aa2.61□□□□□ -1.99
SLIRP-202ENST00000553981 DLX1P56177 255 aa2.61□□□□□ -1.99
SLIRP-202ENST00000553981 NME5P56597 212 aa2.61□□□□□ -1.99
SLIRP-202ENST00000553981 TMEM33P57088 247 aa2.61□□□□□ -1.99
SLIRP-202ENST00000553981 UBE2NP61088 152 aaKnown RBP2.61□□□□□ -1.99
SLIRP-202ENST00000553981 UFM1P61960 85 aa2.61□□□□□ -1.99
SLIRP-202ENST00000553981 ELF3P78545 371 aaPredicted RBP2.61□□□□□ -1.99
SLIRP-202ENST00000553981 PRB3Q04118 309 aaPredicted RBP2.61□□□□□ -1.99
SLIRP-202ENST00000553981 PAX8Q06710 450 aa2.61□□□□□ -1.99
SLIRP-202ENST00000553981 ZNF154Q13106 437 aa2.61□□□□□ -1.99
SLIRP-202ENST00000553981 CAMK2DQ13557 499 aa2.61□□□□□ -1.99
SLIRP-202ENST00000553981 TSTQ16762 297 aaKnown RBP2.61□□□□□ -1.99
SLIRP-202ENST00000553981 IZUMO4Q1ZYL8 232 aa2.61□□□□□ -1.99
SLIRP-202ENST00000553981 DEFB112Q30KQ8 113 aa2.61□□□□□ -1.99
SLIRP-202ENST00000553981 GPAT3Q53EU6 434 aa2.61□□□□□ -1.99
SLIRP-202ENST00000553981 RNF220Q5VTB9 566 aa2.61□□□□□ -1.99
SLIRP-202ENST00000553981 C1orf140Q5VVS0 124 aa2.61□□□□□ -1.99
SLIRP-202ENST00000553981 OTPQ5XKR4 325 aa2.61□□□□□ -1.99
SLIRP-202ENST00000553981 ATG16L1Q676U5 607 aa2.61□□□□□ -1.99
SLIRP-202ENST00000553981 ACSM5Q6NUN0 579 aa2.61□□□□□ -1.99
SLIRP-202ENST00000553981 ZNF774Q6NX45 483 aa2.61□□□□□ -1.99
SLIRP-202ENST00000553981 ACSM6Q6P461 480 aa2.61□□□□□ -1.99
SLIRP-202ENST00000553981 LRRC74BQ6ZQY2 392 aa2.61□□□□□ -1.99
SLIRP-202ENST00000553981 EIF3MQ7L2H7 374 aaKnown RBP2.61□□□□□ -1.99
SLIRP-202ENST00000553981 MSRB3Q8IXL7 192 aa2.61□□□□□ -1.99
SLIRP-202ENST00000553981 ZNF101Q8IZC7 436 aa2.61□□□□□ -1.99
SLIRP-202ENST00000553981 FGFRL1Q8N441 504 aa2.61□□□□□ -1.99
SLIRP-202ENST00000553981 ARFGAP2Q8N6H7 521 aa2.61□□□□□ -1.99
SLIRP-202ENST00000553981 ZNF781Q8N8C0 355 aa2.61□□□□□ -1.99
SLIRP-202ENST00000553981 POMGNT2Q8NAT1 580 aa2.61□□□□□ -1.99
SLIRP-202ENST00000553981 ZNF540Q8NDQ6 660 aa2.61□□□□□ -1.99
SLIRP-202ENST00000553981 OR4F15Q8NGB8 312 aa2.61□□□□□ -1.99
SLIRP-202ENST00000553981 OR52L2PQ8NGH6 319 aa2.61□□□□□ -1.99
SLIRP-202ENST00000553981 OR4A15Q8NGL6 344 aa2.61□□□□□ -1.99
SLIRP-202ENST00000553981 OR51F2Q8NH61 342 aa2.61□□□□□ -1.99
SLIRP-202ENST00000553981 ACMSDQ8TDX5 336 aa2.61□□□□□ -1.99
SLIRP-202ENST00000553981 ABHD5Q8WTS1 349 aa2.61□□□□□ -1.99
SLIRP-202ENST00000553981 TMEM255BQ8WV15 326 aa2.61□□□□□ -1.99
SLIRP-202ENST00000553981 C10orf82Q8WW14 230 aa2.61□□□□□ -1.99
SLIRP-202ENST00000553981 GEMIN6Q8WXD5 167 aaKnown RBP2.61□□□□□ -1.99
SLIRP-202ENST00000553981 TMEM234Q8WY98 164 aa2.61□□□□□ -1.99
SLIRP-202ENST00000553981 TMEM54Q969K7 222 aa2.61□□□□□ -1.99
SLIRP-202ENST00000553981 TMIGD2Q96BF3 282 aa2.61□□□□□ -1.99
SLIRP-202ENST00000553981 SLC25A36Q96CQ1 311 aa2.61□□□□□ -1.99
SLIRP-202ENST00000553981 NEURL3Q96EH8 262 aa2.61□□□□□ -1.99
SLIRP-202ENST00000553981 SLC41A3Q96GZ6 507 aa2.61□□□□□ -1.99
SLIRP-202ENST00000553981 METTL2AQ96IZ6 378 aaKnown RBP2.61□□□□□ -1.99
SLIRP-202ENST00000553981 FMO2Q99518 471 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms