RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 IGHV3-64DA0A0J9YX35 117 aa11.37□□□□□ -0.59
PRPF39-204ENST00000553605 WI2-2373I1.2A0A1W2PRP0 233 aa11.37□□□□□ -0.59
PRPF39-204ENST00000553605 C3orf84H3BNL1 204 aa11.37□□□□□ -0.59
PRPF39-204ENST00000553605 RFXANKO14593 260 aa11.37□□□□□ -0.59
PRPF39-204ENST00000553605 ABHD16AO95870 558 aa11.37□□□□□ -0.59
PRPF39-204ENST00000553605 PRKAR1BP31321 381 aa11.37□□□□□ -0.59
PRPF39-204ENST00000553605 SRP9P49458 86 aaKnown RBP11.37□□□□□ -0.59
PRPF39-204ENST00000553605 ZNF133P52736 654 aaPredicted RBP11.37□□□□□ -0.59
PRPF39-204ENST00000553605 CDH12P55289 794 aa11.37□□□□□ -0.59
PRPF39-204ENST00000553605 NME5P56597 212 aa11.37□□□□□ -0.59
PRPF39-204ENST00000553605 NCALDP61601 193 aa11.37□□□□□ -0.59
PRPF39-204ENST00000553605 UFM1P61960 85 aa11.37□□□□□ -0.59
PRPF39-204ENST00000553605 ARF6P62330 175 aa11.37□□□□□ -0.59
PRPF39-204ENST00000553605 C10orf128Q5T292 105 aa11.37□□□□□ -0.59
PRPF39-204ENST00000553605 PGBD2Q6P3X8 592 aa11.37□□□□□ -0.59
PRPF39-204ENST00000553605 MOGAT3Q86VF5 341 aa11.37□□□□□ -0.59
PRPF39-204ENST00000553605 COMTD1Q86VU5 262 aa11.37□□□□□ -0.59
PRPF39-204ENST00000553605 NUDCD3Q8IVD9 361 aa11.37□□□□□ -0.59
PRPF39-204ENST00000553605 NOXO1Q8NFA2 376 aa11.37□□□□□ -0.59
PRPF39-204ENST00000553605 HAVCR1Q96D42 359 aa11.37□□□□□ -0.59
PRPF39-204ENST00000553605 B9D2Q9BPU9 175 aa11.37□□□□□ -0.59
PRPF39-204ENST00000553605 SEMA6AQ9H2E6 1030 aa11.37□□□□□ -0.59
PRPF39-204ENST00000553605 TBCCD1Q9NVR7 557 aa11.37□□□□□ -0.59
PRPF39-204ENST00000553605 ERVK-18Q9QC07 812 aa11.37□□□□□ -0.59
PRPF39-204ENST00000553605 UGT2A1Q9Y4X1 527 aa11.37□□□□□ -0.59
PRPF39-204ENST00000553605 CENPBD1B2RD01 187 aa11.36□□□□□ -0.59
PRPF39-204ENST00000553605 SLC2A10O95528 541 aa11.36□□□□□ -0.59
PRPF39-204ENST00000553605 CH25HO95992 272 aa11.36□□□□□ -0.59
PRPF39-204ENST00000553605 VSIG10L2P0DP72 767 aa11.36□□□□□ -0.59
PRPF39-204ENST00000553605 PMELP40967 661 aa11.36□□□□□ -0.59
PRPF39-204ENST00000553605 FAM27BQ5VT28 67 aa11.36□□□□□ -0.59
PRPF39-204ENST00000553605 OR5AS1Q8N127 324 aa11.36□□□□□ -0.59
PRPF39-204ENST00000553605 OR10AD1Q8NGE0 317 aa11.36□□□□□ -0.59
PRPF39-204ENST00000553605 OR5R1Q8NH85 324 aa11.36□□□□□ -0.59
PRPF39-204ENST00000553605 BBS10Q8TAM1 723 aa11.36□□□□□ -0.59
PRPF39-204ENST00000553605 PPP1R35Q8TAP8 253 aa11.36□□□□□ -0.59
PRPF39-204ENST00000553605 NPRL2Q8WTW4 380 aa11.36□□□□□ -0.59
PRPF39-204ENST00000553605 SEPHS2Q99611 448 aa11.36□□□□□ -0.59
PRPF39-204ENST00000553605 NUF2Q9BZD4 464 aa11.36□□□□□ -0.59
PRPF39-204ENST00000553605 TPT1P8Q9HAU6 139 aa11.36□□□□□ -0.59
PRPF39-204ENST00000553605 NANSQ9NR45 359 aa11.36□□□□□ -0.59
PRPF39-204ENST00000553605 TIMM10BQ9Y5J6 103 aa11.36□□□□□ -0.59
PRPF39-204ENST00000553605 TENM2Q9NT68 2774 aa11.36□□□□□ -0.59
PRPF39-204ENST00000553605 TRMUO75648 421 aaKnown RBP11.35□□□□□ -0.59
PRPF39-204ENST00000553605 HIST1H2ABP04908 130 aa11.35□□□□□ -0.59
PRPF39-204ENST00000553605 NUDT7P0C024 238 aa11.35□□□□□ -0.59
PRPF39-204ENST00000553605 IRF2P14316 349 aa11.35□□□□□ -0.59
PRPF39-204ENST00000553605 ACADSP16219 412 aa11.35□□□□□ -0.59
PRPF39-204ENST00000553605 CD33P20138 364 aa11.35□□□□□ -0.59
PRPF39-204ENST00000553605 IL12AP29459 219 aa11.35□□□□□ -0.59
PRPF39-204ENST00000553605 ERFP50548 548 aa11.35□□□□□ -0.59
PRPF39-204ENST00000553605 GUCY1A3Q02108 690 aa11.35□□□□□ -0.59
PRPF39-204ENST00000553605 ZNF74Q16587 644 aa11.35□□□□□ -0.59
PRPF39-204ENST00000553605 HIST3H2AQ7L7L0 130 aa11.35□□□□□ -0.59
PRPF39-204ENST00000553605 C19orf18Q8NEA5 215 aa11.35□□□□□ -0.59
PRPF39-204ENST00000553605 WFDC9Q8NEX5 89 aa11.35□□□□□ -0.59
PRPF39-204ENST00000553605 OR13G1Q8NGZ3 307 aa11.35□□□□□ -0.59
PRPF39-204ENST00000553605 OR2T6Q8NHC8 308 aa11.35□□□□□ -0.59
PRPF39-204ENST00000553605 NSMAFQ92636 917 aa11.35□□□□□ -0.59
PRPF39-204ENST00000553605 HIST1H2ACQ93077 130 aa11.35□□□□□ -0.59
PRPF39-204ENST00000553605 PTP4A1Q93096 173 aa11.35□□□□□ -0.59
PRPF39-204ENST00000553605 MAL2Q969L2 176 aa11.35□□□□□ -0.59
PRPF39-204ENST00000553605 CENPHQ9H3R5 247 aa11.35□□□□□ -0.59
PRPF39-204ENST00000553605 CTSZQ9UBR2 303 aa11.35□□□□□ -0.59
PRPF39-204ENST00000553605 TMCC3Q9ULS5 477 aa11.35□□□□□ -0.59
PRPF39-204ENST00000553605 STARD10Q9Y365 291 aa11.35□□□□□ -0.59
PRPF39-204ENST00000553605 SMIM23A6NLE4 172 aa11.34□□□□□ -0.59
PRPF39-204ENST00000553605 MCIDASD6RGH6 385 aa11.34□□□□□ -0.59
PRPF39-204ENST00000553605 TPST1O60507 370 aa11.34□□□□□ -0.59
PRPF39-204ENST00000553605 TPST2O60704 377 aa11.34□□□□□ -0.59
PRPF39-204ENST00000553605 ANP32DO95626 131 aa11.34□□□□□ -0.59
PRPF39-204ENST00000553605 CST2P09228 141 aa11.34□□□□□ -0.59
PRPF39-204ENST00000553605 ETS2P15036 469 aa11.34□□□□□ -0.59
PRPF39-204ENST00000553605 LBPP18428 481 aa11.34□□□□□ -0.59
PRPF39-204ENST00000553605 LAP3P28838 519 aa11.34□□□□□ -0.59
PRPF39-204ENST00000553605 MSX2P35548 267 aaPredicted RBP11.34□□□□□ -0.59
PRPF39-204ENST00000553605 ETV4P43268 484 aa11.34□□□□□ -0.59
PRPF39-204ENST00000553605 RGS8P57771 180 aaPredicted RBP11.34□□□□□ -0.59
PRPF39-204ENST00000553605 PCBD1P61457 104 aa11.34□□□□□ -0.59
PRPF39-204ENST00000553605 SWT1Q5T5J6 900 aaKnown RBP11.34□□□□□ -0.59
PRPF39-204ENST00000553605 ZBTB37Q5TC79 503 aa11.34□□□□□ -0.59
PRPF39-204ENST00000553605 DHRS4L2Q6PKH6 230 aa11.34□□□□□ -0.59
PRPF39-204ENST00000553605 LINC00114Q6XXX2 140 aa11.34□□□□□ -0.59
PRPF39-204ENST00000553605 CALHM3Q86XJ0 350 aa11.34□□□□□ -0.59
PRPF39-204ENST00000553605 NDUFA11Q86Y39 141 aa11.34□□□□□ -0.59
PRPF39-204ENST00000553605 OR4C13Q8NGP0 309 aa11.34□□□□□ -0.59
PRPF39-204ENST00000553605 MMADHCQ9H3L0 296 aaPredicted RBP11.34□□□□□ -0.59
PRPF39-204ENST00000553605 MEAF6Q9HAF1 191 aa11.34□□□□□ -0.59
PRPF39-204ENST00000553605 SMURF2Q9HAU4 748 aa11.34□□□□□ -0.59
PRPF39-204ENST00000553605 SLC17A7Q9P2U7 560 aa11.34□□□□□ -0.59
PRPF39-204ENST00000553605 NDRG4Q9ULP0 352 aaKnown RBP11.34□□□□□ -0.59
PRPF39-204ENST00000553605 PYCARDQ9ULZ3 195 aa11.34□□□□□ -0.59
PRPF39-204ENST00000553605 PCDHGB5Q9Y5G0 923 aa11.34□□□□□ -0.59
PRPF39-204ENST00000553605 IGKV1D-43A0A0B4J1Z2 117 aa11.33□□□□□ -0.6
PRPF39-204ENST00000553605 A0A1W2PRG6 482 aa11.33□□□□□ -0.6
PRPF39-204ENST00000553605 C5orf58C9J3I9 102 aa11.33□□□□□ -0.6
PRPF39-204ENST00000553605 BLOC1S5-TXNDC5H3BN57 136 aa11.33□□□□□ -0.6
PRPF39-204ENST00000553605 FMO6PO60774 539 aa11.33□□□□□ -0.6
PRPF39-204ENST00000553605 FBXO24O75426 580 aa11.33□□□□□ -0.6
PRPF39-204ENST00000553605 SHBGP04278 402 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms