RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 DNM1P34Q6PK57 102 aa9.26□□□□□ -0.93
VTI1BP3-201ENST00000550220 TBPL2Q6SJ96 375 aa9.26□□□□□ -0.93
VTI1BP3-201ENST00000550220 DPY19L2P2Q6ZN68 376 aa9.26□□□□□ -0.93
VTI1BP3-201ENST00000550220 ADCK1Q86TW2 530 aa9.26□□□□□ -0.93
VTI1BP3-201ENST00000550220 IGFN1Q86VF2 1251 aa9.26□□□□□ -0.93
VTI1BP3-201ENST00000550220 GLB1L2Q8IW92 636 aa9.26□□□□□ -0.93
VTI1BP3-201ENST00000550220 SLC7A13Q8TCU3 470 aa9.26□□□□□ -0.93
VTI1BP3-201ENST00000550220 ZFAND2BQ8WV99 257 aa9.26□□□□□ -0.93
VTI1BP3-201ENST00000550220 CCL17Q92583 94 aa9.26□□□□□ -0.93
VTI1BP3-201ENST00000550220 FAHD2AQ96GK7 314 aa9.26□□□□□ -0.93
VTI1BP3-201ENST00000550220 ZNF570Q96NI8 536 aa9.26□□□□□ -0.93
VTI1BP3-201ENST00000550220 LRRC37BQ96QE4 947 aa9.26□□□□□ -0.93
VTI1BP3-201ENST00000550220 DCLRE1CQ96SD1 692 aaKnown RBP9.26□□□□□ -0.93
VTI1BP3-201ENST00000550220 GPX7Q96SL4 187 aaPredicted RBP9.26□□□□□ -0.93
VTI1BP3-201ENST00000550220 NSRP1Q9H0G5 558 aaKnown RBP9.26□□□□□ -0.93
VTI1BP3-201ENST00000550220 NARFLQ9H6Q4 476 aa9.26□□□□□ -0.93
VTI1BP3-201ENST00000550220 ZNF665Q9H7R5 613 aa9.26□□□□□ -0.93
VTI1BP3-201ENST00000550220 GORASP2Q9H8Y8 452 aa9.26□□□□□ -0.93
VTI1BP3-201ENST00000550220 NRIP3Q9NQ35 241 aa9.26□□□□□ -0.93
VTI1BP3-201ENST00000550220 DCAF13Q9NV06 445 aaKnown RBP9.26□□□□□ -0.93
VTI1BP3-201ENST00000550220 NDUFAF4Q9P032 175 aa9.26□□□□□ -0.93
VTI1BP3-201ENST00000550220 ATPIF1Q9UII2 106 aa9.26□□□□□ -0.93
VTI1BP3-201ENST00000550220 KLHL21Q9UJP4 597 aa9.26□□□□□ -0.93
VTI1BP3-201ENST00000550220 AURKCQ9UQB9 309 aa9.26□□□□□ -0.93
VTI1BP3-201ENST00000550220 A0A0G2JMP0 313 aa9.25□□□□□ -0.93
VTI1BP3-201ENST00000550220 A0A0X1KG70 313 aa9.25□□□□□ -0.93
VTI1BP3-201ENST00000550220 FAM157AC9JC47 383 aa9.25□□□□□ -0.93
VTI1BP3-201ENST00000550220 CDC42EP2O14613 210 aa9.25□□□□□ -0.93
VTI1BP3-201ENST00000550220 IMPA2O14732 288 aa9.25□□□□□ -0.93
VTI1BP3-201ENST00000550220 SURF4O15260 269 aa9.25□□□□□ -0.93
VTI1BP3-201ENST00000550220 SLC16A7O60669 478 aa9.25□□□□□ -0.93
VTI1BP3-201ENST00000550220 PNPP00491 289 aa9.25□□□□□ -0.93
VTI1BP3-201ENST00000550220 CRABP1P29762 137 aa9.25□□□□□ -0.93
VTI1BP3-201ENST00000550220 IFNGR2P38484 337 aa9.25□□□□□ -0.93
VTI1BP3-201ENST00000550220 GPR4P46093 362 aa9.25□□□□□ -0.93
VTI1BP3-201ENST00000550220 RGS6P49758 472 aa9.25□□□□□ -0.93
VTI1BP3-201ENST00000550220 MVKQ03426 396 aa9.25□□□□□ -0.93
VTI1BP3-201ENST00000550220 GLO1Q04760 184 aa9.25□□□□□ -0.93
VTI1BP3-201ENST00000550220 SPATA46Q5T0L3 261 aa9.25□□□□□ -0.93
VTI1BP3-201ENST00000550220 SLC27A4Q6P1M0 643 aa9.25□□□□□ -0.93
VTI1BP3-201ENST00000550220 RINLQ6ZS11 566 aa9.25□□□□□ -0.93
VTI1BP3-201ENST00000550220 FAM122BQ7Z309 247 aa9.25□□□□□ -0.93
VTI1BP3-201ENST00000550220 CLDN22Q8N7P3 220 aa9.25□□□□□ -0.93
VTI1BP3-201ENST00000550220 OR4M2Q8NGB6 313 aa9.25□□□□□ -0.93
VTI1BP3-201ENST00000550220 OR5L1Q8NGL2 311 aa9.25□□□□□ -0.93
VTI1BP3-201ENST00000550220 ZNF418Q8TF45 676 aaPredicted RBP9.25□□□□□ -0.93
VTI1BP3-201ENST00000550220 PTP4A1Q93096 173 aa9.25□□□□□ -0.93
VTI1BP3-201ENST00000550220 MCUR1Q96AQ8 359 aa9.25□□□□□ -0.93
VTI1BP3-201ENST00000550220 Q96M85 177 aa9.25□□□□□ -0.93
VTI1BP3-201ENST00000550220 ELAC2Q9BQ52 826 aaKnown RBP9.25□□□□□ -0.93
VTI1BP3-201ENST00000550220 MYLK2Q9H1R3 596 aa9.25□□□□□ -0.93
VTI1BP3-201ENST00000550220 OCEL1Q9H607 264 aa9.25□□□□□ -0.93
VTI1BP3-201ENST00000550220 PLEK2Q9NYT0 353 aa9.25□□□□□ -0.93
VTI1BP3-201ENST00000550220 ADA2Q9NZK5 511 aa9.25□□□□□ -0.93
VTI1BP3-201ENST00000550220 VSX1Q9NZR4 365 aaPredicted RBP9.25□□□□□ -0.93
VTI1BP3-201ENST00000550220 SIGLEC7Q9Y286 467 aa9.25□□□□□ -0.93
VTI1BP3-201ENST00000550220 ADAM18Q9Y3Q7 739 aa9.25□□□□□ -0.93
VTI1BP3-201ENST00000550220 WIPI2Q9Y4P8 454 aa9.25□□□□□ -0.93
VTI1BP3-201ENST00000550220 FBN3Q75N90 2809 aa9.25□□□□□ -0.93
VTI1BP3-201ENST00000550220 CUBNO60494 3623 aa9.24□□□□□ -0.93
VTI1BP3-201ENST00000550220 UNC119BA6NIH7 251 aa9.24□□□□□ -0.93
VTI1BP3-201ENST00000550220 IFNL4K9M1U5 179 aa9.24□□□□□ -0.93
VTI1BP3-201ENST00000550220 WNT9BO14905 357 aa9.24□□□□□ -0.93
VTI1BP3-201ENST00000550220 TIMM8AO60220 97 aaPredicted RBP9.24□□□□□ -0.93
VTI1BP3-201ENST00000550220 DOK2O60496 412 aa9.24□□□□□ -0.93
VTI1BP3-201ENST00000550220 UBOX5O94941 541 aa9.24□□□□□ -0.93
VTI1BP3-201ENST00000550220 MPZL1O95297 269 aa9.24□□□□□ -0.93
VTI1BP3-201ENST00000550220 TXNDC12O95881 172 aa9.24□□□□□ -0.93
VTI1BP3-201ENST00000550220 NGFP01138 241 aa9.24□□□□□ -0.93
VTI1BP3-201ENST00000550220 NCK1P16333 377 aa9.24□□□□□ -0.93
VTI1BP3-201ENST00000550220 KITLGP21583 273 aa9.24□□□□□ -0.93
VTI1BP3-201ENST00000550220 CPT2P23786 658 aa9.24□□□□□ -0.93
VTI1BP3-201ENST00000550220 MPV17P39210 176 aa9.24□□□□□ -0.93
VTI1BP3-201ENST00000550220 OMPP47874 163 aa9.24□□□□□ -0.93
VTI1BP3-201ENST00000550220 HTR5AP47898 357 aa9.24□□□□□ -0.93
VTI1BP3-201ENST00000550220 LIMS1P48059 325 aa9.24□□□□□ -0.93
VTI1BP3-201ENST00000550220 TNFAIP6P98066 277 aaPredicted RBP9.24□□□□□ -0.93
VTI1BP3-201ENST00000550220 CDK5R2Q13319 367 aa9.24□□□□□ -0.93
VTI1BP3-201ENST00000550220 KRR1Q13601 381 aaKnown RBP9.24□□□□□ -0.93
VTI1BP3-201ENST00000550220 KCNMB1Q16558 191 aa9.24□□□□□ -0.93
VTI1BP3-201ENST00000550220 SPATS1Q496A3 300 aa9.24□□□□□ -0.93
VTI1BP3-201ENST00000550220 MESTQ5EB52 335 aa9.24□□□□□ -0.93
VTI1BP3-201ENST00000550220 FGD3Q5JSP0 725 aa9.24□□□□□ -0.93
VTI1BP3-201ENST00000550220 RFPL4BQ6ZWI9 263 aa9.24□□□□□ -0.93
VTI1BP3-201ENST00000550220 CPLX4Q7Z7G2 160 aa9.24□□□□□ -0.93
VTI1BP3-201ENST00000550220 GJC3Q8NFK1 279 aa9.24□□□□□ -0.93
VTI1BP3-201ENST00000550220 FAM46AQ96IP4 442 aaKnown RBP9.24□□□□□ -0.93
VTI1BP3-201ENST00000550220 RSRC1Q96IZ7 334 aaKnown RBP9.24□□□□□ -0.93
VTI1BP3-201ENST00000550220 C7orf34Q96L11 122 aa9.24□□□□□ -0.93
VTI1BP3-201ENST00000550220 SAMD8Q96LT4 415 aa9.24□□□□□ -0.93
VTI1BP3-201ENST00000550220 JMJD8Q96S16 334 aa9.24□□□□□ -0.93
VTI1BP3-201ENST00000550220 GAL3ST1Q99999 423 aa9.24□□□□□ -0.93
VTI1BP3-201ENST00000550220 METTL17Q9H7H0 456 aaPredicted RBP9.24□□□□□ -0.93
VTI1BP3-201ENST00000550220 LPAR2Q9HBW0 351 aa9.24□□□□□ -0.93
VTI1BP3-201ENST00000550220 NDE1Q9NXR1 346 aa9.24□□□□□ -0.93
VTI1BP3-201ENST00000550220 GMPR2Q9P2T1 348 aaKnown RBP9.24□□□□□ -0.93
VTI1BP3-201ENST00000550220 MAGEL2Q9UJ55 1249 aa9.24□□□□□ -0.93
VTI1BP3-201ENST00000550220 PPIAL4EA0A075B759 164 aa9.23□□□□□ -0.93
VTI1BP3-201ENST00000550220 PPIAL4CA0A0B4J2A2 164 aa9.23□□□□□ -0.93
VTI1BP3-201ENST00000550220 OR6C6A6NF89 314 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms