RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 TIMM10BQ9Y5J6 103 aa10.06□□□□□ -0.8
TRAFD1-205ENST00000548277 PPIAL4EA0A075B759 164 aa10.05□□□□□ -0.8
TRAFD1-205ENST00000548277 PPIAL4CA0A0B4J2A2 164 aa10.05□□□□□ -0.8
TRAFD1-205ENST00000548277 BBIP1A8MTZ0 92 aa10.05□□□□□ -0.8
TRAFD1-205ENST00000548277 PPIAL4DF5H284 164 aa10.05□□□□□ -0.8
TRAFD1-205ENST00000548277 ABHD16AO95870 558 aa10.05□□□□□ -0.8
TRAFD1-205ENST00000548277 NPPAP01160 153 aa10.05□□□□□ -0.8
TRAFD1-205ENST00000548277 CD55P08174 381 aa10.05□□□□□ -0.8
TRAFD1-205ENST00000548277 PPIAL4FP0DN26 164 aa10.05□□□□□ -0.8
TRAFD1-205ENST00000548277 TNFSF4P23510 183 aa10.05□□□□□ -0.8
TRAFD1-205ENST00000548277 CD80P33681 288 aa10.05□□□□□ -0.8
TRAFD1-205ENST00000548277 ZNF133P52736 654 aaPredicted RBP10.05□□□□□ -0.8
TRAFD1-205ENST00000548277 CTXN1P60606 82 aa10.05□□□□□ -0.8
TRAFD1-205ENST00000548277 IL13RA1P78552 427 aa10.05□□□□□ -0.8
TRAFD1-205ENST00000548277 CDK5R2Q13319 367 aa10.05□□□□□ -0.8
TRAFD1-205ENST00000548277 MAPRE2Q15555 327 aa10.05□□□□□ -0.8
TRAFD1-205ENST00000548277 ESCO2Q56NI9 601 aa10.05□□□□□ -0.8
TRAFD1-205ENST00000548277 ALG10Q5BKT4 473 aa10.05□□□□□ -0.8
TRAFD1-205ENST00000548277 Q6ZR03 302 aa10.05□□□□□ -0.8
TRAFD1-205ENST00000548277 HDDC2Q7Z4H3 204 aa10.05□□□□□ -0.8
TRAFD1-205ENST00000548277 LRRC28Q86X40 367 aaPredicted RBP10.05□□□□□ -0.8
TRAFD1-205ENST00000548277 SPICQ8N5J4 248 aa10.05□□□□□ -0.8
TRAFD1-205ENST00000548277 ATG16L2Q8NAA4 619 aa10.05□□□□□ -0.8
TRAFD1-205ENST00000548277 ZNF420Q8TAQ5 688 aaPredicted RBP10.05□□□□□ -0.8
TRAFD1-205ENST00000548277 TMIGD2Q96BF3 282 aa10.05□□□□□ -0.8
TRAFD1-205ENST00000548277 NMD3Q96D46 503 aaKnown RBP10.05□□□□□ -0.8
TRAFD1-205ENST00000548277 SAMD8Q96LT4 415 aa10.05□□□□□ -0.8
TRAFD1-205ENST00000548277 SEPHS2Q99611 448 aa10.05□□□□□ -0.8
TRAFD1-205ENST00000548277 TXNIPQ9H3M7 391 aa10.05□□□□□ -0.8
TRAFD1-205ENST00000548277 EMC7Q9NPA0 242 aa10.05□□□□□ -0.8
TRAFD1-205ENST00000548277 MRGBPQ9NV56 204 aa10.05□□□□□ -0.8
TRAFD1-205ENST00000548277 OR5V1Q9UGF6 321 aa10.05□□□□□ -0.8
TRAFD1-205ENST00000548277 PPP1R3CQ9UQK1 317 aa10.05□□□□□ -0.8
TRAFD1-205ENST00000548277 STARD10Q9Y365 291 aa10.05□□□□□ -0.8
TRAFD1-205ENST00000548277 TRRAPQ9Y4A5 3859 aa10.05□□□□□ -0.8
TRAFD1-205ENST00000548277 CENPBD1B2RD01 187 aa10.04□□□□□ -0.8
TRAFD1-205ENST00000548277 H7C1C5 153 aa10.04□□□□□ -0.8
TRAFD1-205ENST00000548277 IFNA14P01570 189 aa10.04□□□□□ -0.8
TRAFD1-205ENST00000548277 RNASE1P07998 156 aaKnown RBP10.04□□□□□ -0.8
TRAFD1-205ENST00000548277 ADH4P08319 380 aa10.04□□□□□ -0.8
TRAFD1-205ENST00000548277 CST2P09228 141 aa10.04□□□□□ -0.8
TRAFD1-205ENST00000548277 IFI30P13284 250 aa10.04□□□□□ -0.8
TRAFD1-205ENST00000548277 YAP1P46937 504 aaKnown RBP10.04□□□□□ -0.8
TRAFD1-205ENST00000548277 ERFP50548 548 aa10.04□□□□□ -0.8
TRAFD1-205ENST00000548277 RPL27P61353 136 aaKnown RBP10.04□□□□□ -0.8
TRAFD1-205ENST00000548277 BTG1P62324 171 aa10.04□□□□□ -0.8
TRAFD1-205ENST00000548277 LCN6P62502 163 aa10.04□□□□□ -0.8
TRAFD1-205ENST00000548277 GUCY1A3Q02108 690 aa10.04□□□□□ -0.8
TRAFD1-205ENST00000548277 ENDOGQ14249 297 aaKnown RBP10.04□□□□□ -0.8
TRAFD1-205ENST00000548277 CYBRD1Q53TN4 286 aa10.04□□□□□ -0.8
TRAFD1-205ENST00000548277 ZMAT1Q5H9K5 638 aa10.04□□□□□ -0.8
TRAFD1-205ENST00000548277 ERICH5Q6P6B1 374 aa10.04□□□□□ -0.8
TRAFD1-205ENST00000548277 ARL9Q6T311 187 aa10.04□□□□□ -0.8
TRAFD1-205ENST00000548277 PARP8Q8N3A8 854 aa10.04□□□□□ -0.8
TRAFD1-205ENST00000548277 KIR3DL3Q8N743 410 aa10.04□□□□□ -0.8
TRAFD1-205ENST00000548277 ZNF283Q8N7M2 679 aa10.04□□□□□ -0.8
TRAFD1-205ENST00000548277 PCYOX1LQ8NBM8 494 aa10.04□□□□□ -0.8
TRAFD1-205ENST00000548277 OR51A7Q8NH64 312 aa10.04□□□□□ -0.8
TRAFD1-205ENST00000548277 SLC7A6Q92536 515 aa10.04□□□□□ -0.8
TRAFD1-205ENST00000548277 OR2V2Q96R30 315 aa10.04□□□□□ -0.8
TRAFD1-205ENST00000548277 ZNF446Q9NWS9 450 aa10.04□□□□□ -0.8
TRAFD1-205ENST00000548277 GID8Q9NWU2 228 aa10.04□□□□□ -0.8
TRAFD1-205ENST00000548277 MED31Q9Y3C7 131 aa10.04□□□□□ -0.8
TRAFD1-205ENST00000548277 TRAV27A0A087WT01 109 aa10.03□□□□□ -0.8
TRAFD1-205ENST00000548277 TRAV40A0A0B4J280 105 aa10.03□□□□□ -0.8
TRAFD1-205ENST00000548277 POM121CA8CG34 1229 aa10.03□□□□□ -0.8
TRAFD1-205ENST00000548277 CEACAM18A8MTB9 384 aa10.03□□□□□ -0.8
TRAFD1-205ENST00000548277 HOXA3O43365 443 aaPredicted RBP10.03□□□□□ -0.8
TRAFD1-205ENST00000548277 OR5F1O95221 314 aa10.03□□□□□ -0.8
TRAFD1-205ENST00000548277 CYB5R3P00387 301 aaPredicted RBP10.03□□□□□ -0.8
TRAFD1-205ENST00000548277 WNT2P09544 360 aa10.03□□□□□ -0.8
TRAFD1-205ENST00000548277 THRBP10828 461 aa10.03□□□□□ -0.8
TRAFD1-205ENST00000548277 TNFRSF1AP19438 455 aa10.03□□□□□ -0.8
TRAFD1-205ENST00000548277 GSTM3P21266 225 aa10.03□□□□□ -0.8
TRAFD1-205ENST00000548277 FUT4P22083 530 aa10.03□□□□□ -0.8
TRAFD1-205ENST00000548277 KDELR2P33947 212 aa10.03□□□□□ -0.8
TRAFD1-205ENST00000548277 HTR5AP47898 357 aa10.03□□□□□ -0.8
TRAFD1-205ENST00000548277 MTNR1AP48039 350 aa10.03□□□□□ -0.8
TRAFD1-205ENST00000548277 PCBD1P61457 104 aa10.03□□□□□ -0.8
TRAFD1-205ENST00000548277 PAX8Q06710 450 aa10.03□□□□□ -0.8
TRAFD1-205ENST00000548277 TMEM155Q4W5P6 130 aa10.03□□□□□ -0.8
TRAFD1-205ENST00000548277 LRRC23Q53EV4 343 aaPredicted RBP10.03□□□□□ -0.8
TRAFD1-205ENST00000548277 FAM201AQ5SY85 155 aa10.03□□□□□ -0.8
TRAFD1-205ENST00000548277 C16orf87Q6PH81 154 aa10.03□□□□□ -0.8
TRAFD1-205ENST00000548277 BRD3OSQ6XYD6 125 aa10.03□□□□□ -0.8
TRAFD1-205ENST00000548277 ZER1Q7Z7L7 766 aa10.03□□□□□ -0.8
TRAFD1-205ENST00000548277 POU5F2Q8N7G0 328 aa10.03□□□□□ -0.8
TRAFD1-205ENST00000548277 OR2T12Q8NG77 320 aa10.03□□□□□ -0.8
TRAFD1-205ENST00000548277 ZDHHC16Q969W1 377 aa10.03□□□□□ -0.8
TRAFD1-205ENST00000548277 TPD52L3Q96J77 140 aa10.03□□□□□ -0.8
TRAFD1-205ENST00000548277 SIGLEC11Q96RL6 698 aa10.03□□□□□ -0.8
TRAFD1-205ENST00000548277 SSBP3Q9BWW4 388 aaPredicted RBP10.03□□□□□ -0.8
TRAFD1-205ENST00000548277 POLR2J2Q9GZM3 115 aaKnown RBP10.03□□□□□ -0.8
TRAFD1-205ENST00000548277 POLR2J3Q9H1A7 115 aaKnown RBP10.03□□□□□ -0.8
TRAFD1-205ENST00000548277 RERGLQ9H628 205 aa10.03□□□□□ -0.8
TRAFD1-205ENST00000548277 SMURF2Q9HAU4 748 aa10.03□□□□□ -0.8
TRAFD1-205ENST00000548277 ARMCX1Q9P291 453 aa10.03□□□□□ -0.8
TRAFD1-205ENST00000548277 STX18Q9P2W9 335 aaKnown RBP10.03□□□□□ -0.8
TRAFD1-205ENST00000548277 RHCGQ9UBD6 479 aa10.03□□□□□ -0.8
TRAFD1-205ENST00000548277 CAPN7Q9Y6W3 813 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms