RNA–Protein interactions for RNA: ENST00000546534.1

SCAF11-208, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-208ENST00000546534 BST1Q10588 318 aa10.62□□□□□ -0.71
SCAF11-208ENST00000546534 SLC27A4Q6P1M0 643 aa10.62□□□□□ -0.71
SCAF11-208ENST00000546534 TTC33Q6PID6 262 aaPredicted RBP10.62□□□□□ -0.71
SCAF11-208ENST00000546534 HIST3H2AQ7L7L0 130 aa10.62□□□□□ -0.71
SCAF11-208ENST00000546534 NANOGNBQ7Z5D8 188 aa10.62□□□□□ -0.71
SCAF11-208ENST00000546534 MSRB3Q8IXL7 192 aa10.62□□□□□ -0.71
SCAF11-208ENST00000546534 FITM2Q8N6M3 262 aa10.62□□□□□ -0.71
SCAF11-208ENST00000546534 SSMEM1Q8WWF3 244 aa10.62□□□□□ -0.71
SCAF11-208ENST00000546534 ASB10Q8WXI3 467 aa10.62□□□□□ -0.71
SCAF11-208ENST00000546534 DYRK2Q92630 601 aa10.62□□□□□ -0.71
SCAF11-208ENST00000546534 HIST1H2ACQ93077 130 aa10.62□□□□□ -0.71
SCAF11-208ENST00000546534 NMD3Q96D46 503 aaKnown RBP10.62□□□□□ -0.71
SCAF11-208ENST00000546534 NEIL1Q96FI4 390 aaPredicted RBP10.62□□□□□ -0.71
SCAF11-208ENST00000546534 PLEKHA8Q96JA3 519 aa10.62□□□□□ -0.71
SCAF11-208ENST00000546534 OR2V2Q96R30 315 aa10.62□□□□□ -0.71
SCAF11-208ENST00000546534 ZNF607Q96SK3 696 aa10.62□□□□□ -0.71
SCAF11-208ENST00000546534 POFUT1Q9H488 388 aa10.62□□□□□ -0.71
SCAF11-208ENST00000546534 GCM1Q9NP62 436 aa10.62□□□□□ -0.71
SCAF11-208ENST00000546534 SDR39U1Q9NRG7 319 aaPredicted RBP10.62□□□□□ -0.71
SCAF11-208ENST00000546534 MAN2C1Q9NTJ4 1040 aa10.62□□□□□ -0.71
SCAF11-208ENST00000546534 MIOXQ9UGB7 285 aa10.62□□□□□ -0.71
SCAF11-208ENST00000546534 ZNF229Q9UJW7 825 aa10.62□□□□□ -0.71
SCAF11-208ENST00000546534 KMT2CQ8NEZ4 4911 aaKnown RBP10.62□□□□□ -0.71
SCAF11-208ENST00000546534 A0A1W2PRG6 482 aa10.61□□□□□ -0.71
SCAF11-208ENST00000546534 TRPC5OSA6NMA1 111 aa10.61□□□□□ -0.71
SCAF11-208ENST00000546534 CPSF4LA6NMK7 179 aaKnown RBP10.61□□□□□ -0.71
SCAF11-208ENST00000546534 CENPBD1B2RD01 187 aa10.61□□□□□ -0.71
SCAF11-208ENST00000546534 H0YL77 283 aa10.61□□□□□ -0.71
SCAF11-208ENST00000546534 TNFRSF13BO14836 293 aaPredicted RBP10.61□□□□□ -0.71
SCAF11-208ENST00000546534 SURF4O15260 269 aa10.61□□□□□ -0.71
SCAF11-208ENST00000546534 HDAC3O15379 428 aa10.61□□□□□ -0.71
SCAF11-208ENST00000546534 FMO6PO60774 539 aa10.61□□□□□ -0.71
SCAF11-208ENST00000546534 CYB5R3P00387 301 aaPredicted RBP10.61□□□□□ -0.71
SCAF11-208ENST00000546534 GSTM3P21266 225 aa10.61□□□□□ -0.71
SCAF11-208ENST00000546534 RPL18Q07020 188 aaKnown RBP10.61□□□□□ -0.71
SCAF11-208ENST00000546534 SCARB2Q14108 478 aa10.61□□□□□ -0.71
SCAF11-208ENST00000546534 NPTX1Q15818 432 aa10.61□□□□□ -0.71
SCAF11-208ENST00000546534 RUNDC3AQ59EK9 446 aa10.61□□□□□ -0.71
SCAF11-208ENST00000546534 ENTPD8Q5MY95 495 aa10.61□□□□□ -0.71
SCAF11-208ENST00000546534 FAM27BQ5VT28 67 aa10.61□□□□□ -0.71
SCAF11-208ENST00000546534 ARMC8Q8IUR7 673 aa10.61□□□□□ -0.71
SCAF11-208ENST00000546534 GOLGA6L1Q8N7Z2 621 aa10.61□□□□□ -0.71
SCAF11-208ENST00000546534 SMYD1Q8NB12 490 aa10.61□□□□□ -0.71
SCAF11-208ENST00000546534 ZNF420Q8TAQ5 688 aaPredicted RBP10.61□□□□□ -0.71
SCAF11-208ENST00000546534 NSMAFQ92636 917 aa10.61□□□□□ -0.71
SCAF11-208ENST00000546534 CMBLQ96DG6 245 aa10.61□□□□□ -0.71
SCAF11-208ENST00000546534 TMEM246Q9BRR3 403 aa10.61□□□□□ -0.71
SCAF11-208ENST00000546534 CDADC1Q9BWV3 514 aa10.61□□□□□ -0.71
SCAF11-208ENST00000546534 EVA1AQ9H8M9 152 aa10.61□□□□□ -0.71
SCAF11-208ENST00000546534 IFNL4K9M1U5 179 aa10.6□□□□□ -0.71
SCAF11-208ENST00000546534 SERPINB7O75635 380 aa10.6□□□□□ -0.71
SCAF11-208ENST00000546534 KITLGP21583 273 aa10.6□□□□□ -0.71
SCAF11-208ENST00000546534 LAP3P28838 519 aa10.6□□□□□ -0.71
SCAF11-208ENST00000546534 PITPNBP48739 271 aa10.6□□□□□ -0.71
SCAF11-208ENST00000546534 ERFP50548 548 aa10.6□□□□□ -0.71
SCAF11-208ENST00000546534 DAP3P51398 398 aaKnown RBP10.6□□□□□ -0.71
SCAF11-208ENST00000546534 MPP2Q14168 576 aa10.6□□□□□ -0.71
SCAF11-208ENST00000546534 C2orf68Q2NKX9 166 aa10.6□□□□□ -0.71
SCAF11-208ENST00000546534 TTMPQ5BVD1 217 aa10.6□□□□□ -0.71
SCAF11-208ENST00000546534 ARMC4Q5T2S8 1044 aa10.6□□□□□ -0.71
SCAF11-208ENST00000546534 KPRPQ5T749 579 aaPredicted RBP10.6□□□□□ -0.71
SCAF11-208ENST00000546534 ARL9Q6T311 187 aa10.6□□□□□ -0.71
SCAF11-208ENST00000546534 TSPYL5Q86VY4 417 aaPredicted RBP10.6□□□□□ -0.71
SCAF11-208ENST00000546534 RBM45Q8IUH3 476 aaKnown RBP10.6□□□□□ -0.71
SCAF11-208ENST00000546534 OR8B3Q8NGG8 313 aa10.6□□□□□ -0.71
SCAF11-208ENST00000546534 OR6T1Q8NGN1 323 aa10.6□□□□□ -0.71
SCAF11-208ENST00000546534 TBC1D15Q8TC07 691 aa10.6□□□□□ -0.71
SCAF11-208ENST00000546534 ADAMTS16Q8TE57 1224 aa10.6□□□□□ -0.71
SCAF11-208ENST00000546534 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.6□□□□□ -0.71
SCAF11-208ENST00000546534 HDAC2Q92769 488 aaKnown RBP10.6□□□□□ -0.71
SCAF11-208ENST00000546534 OR8B2Q96RD0 313 aa10.6□□□□□ -0.71
SCAF11-208ENST00000546534 PCGF1Q9BSM1 259 aa10.6□□□□□ -0.71
SCAF11-208ENST00000546534 SMURF2Q9HAU4 748 aa10.6□□□□□ -0.71
SCAF11-208ENST00000546534 INIPQ9NRY2 104 aa10.6□□□□□ -0.71
SCAF11-208ENST00000546534 SLAMF8Q9P0V8 285 aa10.6□□□□□ -0.71
SCAF11-208ENST00000546534 SLC7A7Q9UM01 511 aa10.6□□□□□ -0.71
SCAF11-208ENST00000546534 TIMM10BQ9Y5J6 103 aa10.6□□□□□ -0.71
SCAF11-208ENST00000546534 C5orf63A6NC05 138 aa10.59□□□□□ -0.71
SCAF11-208ENST00000546534 UBDO15205 165 aa10.59□□□□□ -0.71
SCAF11-208ENST00000546534 ABHD16AO95870 558 aa10.59□□□□□ -0.71
SCAF11-208ENST00000546534 IGHV4-59P01825 116 aa10.59□□□□□ -0.71
SCAF11-208ENST00000546534 SFTPBP07988 381 aa10.59□□□□□ -0.71
SCAF11-208ENST00000546534 CST2P09228 141 aa10.59□□□□□ -0.71
SCAF11-208ENST00000546534 CSF1P09603 554 aa10.59□□□□□ -0.71
SCAF11-208ENST00000546534 KITP10721 976 aa10.59□□□□□ -0.71
SCAF11-208ENST00000546534 SLC6A2P23975 617 aa10.59□□□□□ -0.71
SCAF11-208ENST00000546534 AQP2P41181 271 aa10.59□□□□□ -0.71
SCAF11-208ENST00000546534 CD47Q08722 323 aa10.59□□□□□ -0.71
SCAF11-208ENST00000546534 DUSP7Q16829 419 aa10.59□□□□□ -0.71
SCAF11-208ENST00000546534 FAM201AQ5SY85 155 aa10.59□□□□□ -0.71
SCAF11-208ENST00000546534 LRIF1Q5T3J3 769 aa10.59□□□□□ -0.71
SCAF11-208ENST00000546534 WDR25Q64LD2 544 aaPredicted RBP10.59□□□□□ -0.71
SCAF11-208ENST00000546534 SLC25A47Q6Q0C1 308 aa10.59□□□□□ -0.71
SCAF11-208ENST00000546534 LYPD2Q6UXB3 125 aa10.59□□□□□ -0.71
SCAF11-208ENST00000546534 HDDC2Q7Z4H3 204 aa10.59□□□□□ -0.71
SCAF11-208ENST00000546534 NPEPL1Q8NDH3 523 aa10.59□□□□□ -0.71
SCAF11-208ENST00000546534 GPR32P1Q8NGA4 272 aa10.59□□□□□ -0.71
SCAF11-208ENST00000546534 OR4D11Q8NGI4 311 aa10.59□□□□□ -0.71
SCAF11-208ENST00000546534 VANGL1Q8TAA9 524 aaPredicted RBP10.59□□□□□ -0.71
SCAF11-208ENST00000546534 C10orf82Q8WW14 230 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms