RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 C10orf90Q96M02 699 aa7.83□□□□□ -1.16
CLIP1-218ENST00000545889 NPAS1Q99742 590 aa7.83□□□□□ -1.16
CLIP1-218ENST00000545889 CMSS1Q9BQ75 279 aaKnown RBP7.83□□□□□ -1.16
CLIP1-218ENST00000545889 ARL6Q9H0F7 186 aa7.83□□□□□ -1.16
CLIP1-218ENST00000545889 GLIPR2Q9H4G4 154 aa7.83□□□□□ -1.16
CLIP1-218ENST00000545889 MIOXQ9UGB7 285 aa7.83□□□□□ -1.16
CLIP1-218ENST00000545889 A0A096LPE4 126 aa7.83□□□□□ -1.16
CLIP1-218ENST00000545889 A0A1W2PPZ6 126 aa7.83□□□□□ -1.16
CLIP1-218ENST00000545889 FAM183AA6NL82 134 aa7.83□□□□□ -1.16
CLIP1-218ENST00000545889 IFNA4P05014 189 aa7.83□□□□□ -1.16
CLIP1-218ENST00000545889 SELEP16581 610 aa7.83□□□□□ -1.16
CLIP1-218ENST00000545889 GGT1P19440 569 aa7.83□□□□□ -1.16
CLIP1-218ENST00000545889 RAB13P51153 203 aa7.83□□□□□ -1.16
CLIP1-218ENST00000545889 PSMA6P60900 246 aaKnown RBP7.83□□□□□ -1.16
CLIP1-218ENST00000545889 PPP1CAP62136 330 aa7.83□□□□□ -1.16
CLIP1-218ENST00000545889 SSPNQ14714 243 aa7.83□□□□□ -1.16
CLIP1-218ENST00000545889 ACER2Q5QJU3 275 aa7.83□□□□□ -1.16
CLIP1-218ENST00000545889 LINC01555Q8NAE3 123 aa7.83□□□□□ -1.16
CLIP1-218ENST00000545889 STEAP2Q8NFT2 490 aa7.83□□□□□ -1.16
CLIP1-218ENST00000545889 HRASLS5Q96KN8 279 aa7.83□□□□□ -1.16
CLIP1-218ENST00000545889 EMC6Q9BV81 110 aa7.83□□□□□ -1.16
CLIP1-218ENST00000545889 FAM234AQ9H0X4 552 aa7.83□□□□□ -1.16
CLIP1-218ENST00000545889 ABCG5Q9H222 651 aa7.83□□□□□ -1.16
CLIP1-218ENST00000545889 A0A0A6YYH2 397 aa7.83□□□□□ -1.16
CLIP1-218ENST00000545889 LRIT2A6NDA9 550 aa7.83□□□□□ -1.16
CLIP1-218ENST00000545889 A6NJ64 397 aa7.83□□□□□ -1.16
CLIP1-218ENST00000545889 ZNF593O00488 134 aaPredicted RBP7.83□□□□□ -1.16
CLIP1-218ENST00000545889 HOXD4P09016 255 aaPredicted RBP7.83□□□□□ -1.16
CLIP1-218ENST00000545889 S100PP25815 95 aa7.83□□□□□ -1.16
CLIP1-218ENST00000545889 PLA2G7Q13093 441 aa7.83□□□□□ -1.16
CLIP1-218ENST00000545889 MFSD12Q6NUT3 480 aa7.83□□□□□ -1.16
CLIP1-218ENST00000545889 BAIAP2L2Q6UXY1 529 aa7.83□□□□□ -1.16
CLIP1-218ENST00000545889 ABI3BPQ7Z7G0 1075 aa7.83□□□□□ -1.16
CLIP1-218ENST00000545889 CDH26Q8IXH8 852 aa7.83□□□□□ -1.16
CLIP1-218ENST00000545889 CMTM4Q8IZR5 234 aa7.83□□□□□ -1.16
CLIP1-218ENST00000545889 FAM185AQ8N0U4 392 aa7.83□□□□□ -1.16
CLIP1-218ENST00000545889 GCNT2Q8N0V5 402 aa7.83□□□□□ -1.16
CLIP1-218ENST00000545889 OR6V1Q8N148 313 aa7.83□□□□□ -1.16
CLIP1-218ENST00000545889 AKR7LQ8NHP1 331 aa7.83□□□□□ -1.16
CLIP1-218ENST00000545889 OPALINQ96PE5 141 aa7.83□□□□□ -1.16
CLIP1-218ENST00000545889 SGPP1Q9BX95 441 aa7.83□□□□□ -1.16
CLIP1-218ENST00000545889 CACNG2Q9Y698 323 aa7.83□□□□□ -1.16
CLIP1-218ENST00000545889 TRABD2BA6NFA1 517 aa7.83□□□□□ -1.16
CLIP1-218ENST00000545889 ST8SIA5O15466 376 aa7.83□□□□□ -1.16
CLIP1-218ENST00000545889 LILRB5O75023 590 aa7.83□□□□□ -1.16
CLIP1-218ENST00000545889 RGS9O75916 674 aaPredicted RBP7.83□□□□□ -1.16
CLIP1-218ENST00000545889 PIPP12273 146 aaPredicted RBP7.83□□□□□ -1.16
CLIP1-218ENST00000545889 HOXB3P14651 431 aaPredicted RBP7.83□□□□□ -1.16
CLIP1-218ENST00000545889 COX6B1P14854 86 aa7.83□□□□□ -1.16
CLIP1-218ENST00000545889 SNTB2Q13425 540 aaKnown RBP7.83□□□□□ -1.16
CLIP1-218ENST00000545889 MSMO1Q15800 293 aa7.83□□□□□ -1.16
CLIP1-218ENST00000545889 SGPP2Q8IWX5 399 aa7.83□□□□□ -1.16
CLIP1-218ENST00000545889 TCTE3Q8IZS6 198 aa7.83□□□□□ -1.16
CLIP1-218ENST00000545889 OR13C2Q8NGS9 318 aa7.83□□□□□ -1.16
CLIP1-218ENST00000545889 UBL7Q96S82 380 aaPredicted RBP7.83□□□□□ -1.16
CLIP1-218ENST00000545889 TAS2R8Q9NYW2 309 aa7.83□□□□□ -1.16
CLIP1-218ENST00000545889 PCOLCE2Q9UKZ9 415 aa7.83□□□□□ -1.16
CLIP1-218ENST00000545889 LAMA3Q16787 3333 aa7.82□□□□□ -1.16
CLIP1-218ENST00000545889 ANKRD36A6QL64 1941 aa7.82□□□□□ -1.16
CLIP1-218ENST00000545889 TCRBV16S1A1N1A0A5B0 115 aa7.82□□□□□ -1.16
CLIP1-218ENST00000545889 OR6C76A6NM76 312 aa7.82□□□□□ -1.16
CLIP1-218ENST00000545889 SIGLEC5O15389 551 aa7.82□□□□□ -1.16
CLIP1-218ENST00000545889 SLC19A2O60779 497 aa7.82□□□□□ -1.16
CLIP1-218ENST00000545889 FAM157BP0CG42 384 aa7.82□□□□□ -1.16
CLIP1-218ENST00000545889 HNF1AP20823 631 aa7.82□□□□□ -1.16
CLIP1-218ENST00000545889 ISL1P61371 349 aa7.82□□□□□ -1.16
CLIP1-218ENST00000545889 CLINT1Q14677 625 aa7.82□□□□□ -1.16
CLIP1-218ENST00000545889 GGTA1PQ4G0N0 100 aa7.82□□□□□ -1.16
CLIP1-218ENST00000545889 TRMT12Q53H54 448 aaKnown RBP7.82□□□□□ -1.16
CLIP1-218ENST00000545889 ZNF691Q5VV52 312 aa7.82□□□□□ -1.16
CLIP1-218ENST00000545889 ANKRD16Q6P6B7 361 aa7.82□□□□□ -1.16
CLIP1-218ENST00000545889 C19orf48Q6RUI8 117 aa7.82□□□□□ -1.16
CLIP1-218ENST00000545889 MAMSTRQ6ZN01 415 aa7.82□□□□□ -1.16
CLIP1-218ENST00000545889 FUNDC1Q8IVP5 155 aa7.82□□□□□ -1.16
CLIP1-218ENST00000545889 GPBAR1Q8TDU6 330 aa7.82□□□□□ -1.16
CLIP1-218ENST00000545889 TAAR8Q969N4 342 aa7.82□□□□□ -1.16
CLIP1-218ENST00000545889 BORCS7Q96B45 105 aa7.82□□□□□ -1.16
CLIP1-218ENST00000545889 TM4SF18Q96CE8 201 aa7.82□□□□□ -1.16
CLIP1-218ENST00000545889 MS4A6EQ96DS6 147 aa7.82□□□□□ -1.16
CLIP1-218ENST00000545889 SHARPINQ9H0F6 387 aa7.82□□□□□ -1.16
CLIP1-218ENST00000545889 ANKRD19PQ9H560 264 aa7.82□□□□□ -1.16
CLIP1-218ENST00000545889 SYNPO2LQ9H987 977 aa7.82□□□□□ -1.16
CLIP1-218ENST00000545889 MGAT4CQ9UBM8 478 aa7.82□□□□□ -1.16
CLIP1-218ENST00000545889 CTSFQ9UBX1 484 aa7.82□□□□□ -1.16
CLIP1-218ENST00000545889 ZNF346Q9UL40 294 aaKnown RBP7.82□□□□□ -1.16
CLIP1-218ENST00000545889 SLCO1B1Q9Y6L6 691 aa7.82□□□□□ -1.16
CLIP1-218ENST00000545889 A0A1B0GTQ1 180 aa7.82□□□□□ -1.16
CLIP1-218ENST00000545889 MASP2O00187 686 aa7.82□□□□□ -1.16
CLIP1-218ENST00000545889 PIP5K1CO60331 668 aa7.82□□□□□ -1.16
CLIP1-218ENST00000545889 SERPINA7P05543 415 aa7.82□□□□□ -1.16
CLIP1-218ENST00000545889 ARAFP10398 606 aa7.82□□□□□ -1.16
CLIP1-218ENST00000545889 APEX1P27695 318 aaKnown RBP7.82□□□□□ -1.16
CLIP1-218ENST00000545889 SCGB2A2Q13296 93 aa7.82□□□□□ -1.16
CLIP1-218ENST00000545889 DYRK1AQ13627 763 aa7.82□□□□□ -1.16
CLIP1-218ENST00000545889 FAM198BQ6UWH4 519 aa7.82□□□□□ -1.16
CLIP1-218ENST00000545889 FCRLAQ7L513 359 aa7.82□□□□□ -1.16
CLIP1-218ENST00000545889 ADGRG3Q86Y34 549 aa7.82□□□□□ -1.16
CLIP1-218ENST00000545889 LINC00346Q8IVM7 164 aa7.82□□□□□ -1.16
CLIP1-218ENST00000545889 CMIPQ8IY22 773 aa7.82□□□□□ -1.16
CLIP1-218ENST00000545889 RNF113BQ8IZP6 322 aaKnown RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms