RNA–Protein interactions for RNA: ENST00000543660.1

NPIPB4-219, Transcript of nuclear pore complex interacting protein family member B4, human

TSL 5

Gene NPIPB4, Length 353 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB4-219	ENST00000543660	C5orf51	A6NDU8	294 aa		4.08	□□□□□ -1.76
NPIPB4-219	ENST00000543660	TRIM49D1	C9J1S8	452 aa		4.08	□□□□□ -1.76
NPIPB4-219	ENST00000543660		E7ESA3	106 aa		4.08	□□□□□ -1.76
NPIPB4-219	ENST00000543660	NPIPB6	E9PJ23	425 aa		4.08	□□□□□ -1.76
NPIPB4-219	ENST00000543660	CIDEA	O60543	219 aa		4.08	□□□□□ -1.76
NPIPB4-219	ENST00000543660	ATP6V1G1	O75348	118 aa		4.08	□□□□□ -1.76
NPIPB4-219	ENST00000543660	RHBDL1	O75783	438 aa		4.08	□□□□□ -1.76
NPIPB4-219	ENST00000543660	CLPX	O76031	633 aa		4.08	□□□□□ -1.76
NPIPB4-219	ENST00000543660	OR6A2	O95222	327 aa		4.08	□□□□□ -1.76
NPIPB4-219	ENST00000543660	PMS2P2	O95744	297 aa		4.08	□□□□□ -1.76
NPIPB4-219	ENST00000543660	GPANK1	O95872	356 aa		4.08	□□□□□ -1.76
NPIPB4-219	ENST00000543660	LGI1	O95970	557 aa		4.08	□□□□□ -1.76
NPIPB4-219	ENST00000543660	NPPA	P01160	153 aa		4.08	□□□□□ -1.76
NPIPB4-219	ENST00000543660	CHRM2	P08172	466 aa		4.08	□□□□□ -1.76
NPIPB4-219	ENST00000543660	CBR1	P16152	277 aa		4.08	□□□□□ -1.76
NPIPB4-219	ENST00000543660	NR4A1	P22736	598 aa		4.08	□□□□□ -1.76
NPIPB4-219	ENST00000543660	CRABP2	P29373	138 aa		4.08	□□□□□ -1.76
NPIPB4-219	ENST00000543660	MAGEA8	P43361	318 aa		4.08	□□□□□ -1.76
NPIPB4-219	ENST00000543660	FNTA	P49354	379 aa		4.08	□□□□□ -1.76
NPIPB4-219	ENST00000543660	ANXA11	P50995	505 aa	Known RBP	4.08	□□□□□ -1.76
NPIPB4-219	ENST00000543660	ATP4B	P51164	291 aa		4.08	□□□□□ -1.76
NPIPB4-219	ENST00000543660	CDH13	P55290	713 aa		4.08	□□□□□ -1.76
NPIPB4-219	ENST00000543660	PROK1	P58294	105 aa		4.08	□□□□□ -1.76
NPIPB4-219	ENST00000543660	UBE2N	P61088	152 aa	Known RBP	4.08	□□□□□ -1.76
NPIPB4-219	ENST00000543660	LCN2	P80188	198 aa		4.08	□□□□□ -1.76
NPIPB4-219	ENST00000543660	COL10A1	Q03692	680 aa		4.08	□□□□□ -1.76
NPIPB4-219	ENST00000543660	C2orf80	Q0P641	193 aa		4.08	□□□□□ -1.76
NPIPB4-219	ENST00000543660	SNTB2	Q13425	540 aa	Known RBP	4.08	□□□□□ -1.76
NPIPB4-219	ENST00000543660	MAD2L1BP	Q15013	274 aa	Predicted RBP	4.08	□□□□□ -1.76
NPIPB4-219	ENST00000543660	VWC2	Q2TAL6	325 aa		4.08	□□□□□ -1.76
NPIPB4-219	ENST00000543660	ARMCX4	Q5H9R4	360 aa		4.08	□□□□□ -1.76
NPIPB4-219	ENST00000543660	REP15	Q6BDI9	236 aa		4.08	□□□□□ -1.76
NPIPB4-219	ENST00000543660	FAM71E1	Q6IPT2	247 aa		4.08	□□□□□ -1.76
NPIPB4-219	ENST00000543660	SYT10	Q6XYQ8	523 aa		4.08	□□□□□ -1.76
NPIPB4-219	ENST00000543660	WDR88	Q6ZMY6	472 aa		4.08	□□□□□ -1.76
NPIPB4-219	ENST00000543660	TMEM182	Q6ZP80	229 aa	Predicted RBP	4.08	□□□□□ -1.76
NPIPB4-219	ENST00000543660	C9orf139	Q6ZV77	190 aa		4.08	□□□□□ -1.76
NPIPB4-219	ENST00000543660	RPS27L	Q71UM5	84 aa	Known RBP	4.08	□□□□□ -1.76
NPIPB4-219	ENST00000543660	LINGO2	Q7L985	606 aa		4.08	□□□□□ -1.76
NPIPB4-219	ENST00000543660	PIGW	Q7Z7B1	504 aa		4.08	□□□□□ -1.76
NPIPB4-219	ENST00000543660	LRP11	Q86VZ4	500 aa		4.08	□□□□□ -1.76
NPIPB4-219	ENST00000543660	ZIC4	Q8N9L1	334 aa		4.08	□□□□□ -1.76
NPIPB4-219	ENST00000543660	CDRT4	Q8N9R6	151 aa		4.08	□□□□□ -1.76
NPIPB4-219	ENST00000543660	SCAI	Q8N9R8	606 aa		4.08	□□□□□ -1.76
NPIPB4-219	ENST00000543660	BHLHE23	Q8NDY6	225 aa		4.08	□□□□□ -1.76
NPIPB4-219	ENST00000543660	OR56B1	Q8NGI3	324 aa		4.08	□□□□□ -1.76
NPIPB4-219	ENST00000543660	MAGEE2	Q8TD90	523 aa	Predicted RBP	4.08	□□□□□ -1.76
NPIPB4-219	ENST00000543660	SLC25A43	Q8WUT9	341 aa	Predicted RBP	4.08	□□□□□ -1.76
NPIPB4-219	ENST00000543660	GTF3A	Q92664	365 aa	Known RBP	4.08	□□□□□ -1.76
NPIPB4-219	ENST00000543660	TMEM45B	Q96B21	275 aa		4.08	□□□□□ -1.76
NPIPB4-219	ENST00000543660	ZHX1-C8orf76	Q96EF9	292 aa		4.08	□□□□□ -1.76
NPIPB4-219	ENST00000543660	DNAJA3	Q96EY1	480 aa		4.08	□□□□□ -1.76
NPIPB4-219	ENST00000543660	OTUB1	Q96FW1	271 aa	Predicted RBP	4.08	□□□□□ -1.76
NPIPB4-219	ENST00000543660	C16orf58	Q96GQ5	468 aa		4.08	□□□□□ -1.76
NPIPB4-219	ENST00000543660	KIRREL1	Q96J84	757 aa		4.08	□□□□□ -1.76
NPIPB4-219	ENST00000543660	WWC2-AS2	Q96NR7	200 aa		4.08	□□□□□ -1.76
NPIPB4-219	ENST00000543660	ZNF317	Q96PQ6	595 aa	Predicted RBP	4.08	□□□□□ -1.76
NPIPB4-219	ENST00000543660	CPNE1	Q99829	537 aa		4.08	□□□□□ -1.76
NPIPB4-219	ENST00000543660	SIKE1	Q9BRV8	207 aa		4.08	□□□□□ -1.76
NPIPB4-219	ENST00000543660	ABHD6	Q9BV23	337 aa		4.08	□□□□□ -1.76
NPIPB4-219	ENST00000543660	GATA5	Q9BWX5	397 aa	Predicted RBP	4.08	□□□□□ -1.76
NPIPB4-219	ENST00000543660	EBPL	Q9BY08	206 aa		4.08	□□□□□ -1.76
NPIPB4-219	ENST00000543660	NUF2	Q9BZD4	464 aa		4.08	□□□□□ -1.76
NPIPB4-219	ENST00000543660	FAM192A	Q9GZU8	254 aa		4.08	□□□□□ -1.76
NPIPB4-219	ENST00000543660	NUAK2	Q9H093	628 aa		4.08	□□□□□ -1.76
NPIPB4-219	ENST00000543660	VCX2	Q9H322	139 aa		4.08	□□□□□ -1.76
NPIPB4-219	ENST00000543660	ZNF385D	Q9H6B1	395 aa		4.08	□□□□□ -1.76
NPIPB4-219	ENST00000543660	NOX3	Q9HBY0	568 aa		4.08	□□□□□ -1.76
NPIPB4-219	ENST00000543660	MMP26	Q9NRE1	261 aa		4.08	□□□□□ -1.76
NPIPB4-219	ENST00000543660	TMEM45A	Q9NWC5	275 aa		4.08	□□□□□ -1.76
NPIPB4-219	ENST00000543660	GIN1	Q9NXP7	522 aa		4.08	□□□□□ -1.76
NPIPB4-219	ENST00000543660	MYEF2	Q9P2K5	600 aa	Known RBP	4.08	□□□□□ -1.76
NPIPB4-219	ENST00000543660	SLC9A8	Q9Y2E8	581 aa		4.08	□□□□□ -1.76
NPIPB4-219	ENST00000543660	STK38L	Q9Y2H1	464 aa		4.08	□□□□□ -1.76
NPIPB4-219	ENST00000543660	WIPI2	Q9Y4P8	454 aa		4.08	□□□□□ -1.76
NPIPB4-219	ENST00000543660	N6AMT1	Q9Y5N5	214 aa		4.08	□□□□□ -1.76
NPIPB4-219	ENST00000543660	AUP1	Q9Y679	476 aa		4.08	□□□□□ -1.76
NPIPB4-219	ENST00000543660		A0A0B4J293	547 aa		4.07	□□□□□ -1.76
NPIPB4-219	ENST00000543660	MDFIC2	A0A1B0GVS7	189 aa		4.07	□□□□□ -1.76
NPIPB4-219	ENST00000543660	ZSCAN5B	A6NJL1	495 aa		4.07	□□□□□ -1.76
NPIPB4-219	ENST00000543660	FAM159B	A6NKW6	160 aa		4.07	□□□□□ -1.76
NPIPB4-219	ENST00000543660		F5H697	171 aa		4.07	□□□□□ -1.76
NPIPB4-219	ENST00000543660	NPIPB9	F8W1W9	429 aa		4.07	□□□□□ -1.76
NPIPB4-219	ENST00000543660		H3BNH8	94 aa		4.07	□□□□□ -1.76
NPIPB4-219	ENST00000543660	TRAPPC2L	H3BP13	241 aa		4.07	□□□□□ -1.76
NPIPB4-219	ENST00000543660	WRB	O00258	174 aa		4.07	□□□□□ -1.76
NPIPB4-219	ENST00000543660	MANBA	O00462	879 aa		4.07	□□□□□ -1.76
NPIPB4-219	ENST00000543660	ZNF264	O43296	627 aa		4.07	□□□□□ -1.76
NPIPB4-219	ENST00000543660	HOXA3	O43365	443 aa	Predicted RBP	4.07	□□□□□ -1.76
NPIPB4-219	ENST00000543660	TRAF3IP2	O43734	574 aa	Predicted RBP	4.07	□□□□□ -1.76
NPIPB4-219	ENST00000543660	EIF4E2	O60573	245 aa	Known RBP	4.07	□□□□□ -1.76
NPIPB4-219	ENST00000543660	SELENOF	O60613	162 aa		4.07	□□□□□ -1.76
NPIPB4-219	ENST00000543660	CDC14B	O60729	498 aa		4.07	□□□□□ -1.76
NPIPB4-219	ENST00000543660	RSL1D1	O76021	490 aa	Known RBP	4.07	□□□□□ -1.76
NPIPB4-219	ENST00000543660	C2	P06681	752 aa		4.07	□□□□□ -1.76
NPIPB4-219	ENST00000543660	ANXA4	P09525	319 aa	Predicted RBP	4.07	□□□□□ -1.76
NPIPB4-219	ENST00000543660	STAG3L3	P0CL85	134 aa		4.07	□□□□□ -1.76
NPIPB4-219	ENST00000543660	IGHV4-38-2	P0DP08	117 aa		4.07	□□□□□ -1.76
NPIPB4-219	ENST00000543660	MED14OS	P0DP75	135 aa		4.07	□□□□□ -1.76
NPIPB4-219	ENST00000543660	TFPI	P10646	304 aa		4.07	□□□□□ -1.76

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