RNA–Protein interactions for RNA: ENST00000542420.6

SS18-205, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2 BASIC

Gene SS18, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-205ENST00000542420 OR6X1Q8NH79 312 aa8.83□□□□□ -1
SS18-205ENST00000542420 ASB5Q8WWX0 329 aa8.83□□□□□ -1
SS18-205ENST00000542420 AMELYQ99218 206 aa8.83□□□□□ -1
SS18-205ENST00000542420 MRPL13Q9BYD1 178 aaKnown RBP8.83□□□□□ -1
SS18-205ENST00000542420 OR11A1Q9GZK7 315 aa8.83□□□□□ -1
SS18-205ENST00000542420 METTL7AQ9H8H3 244 aa8.83□□□□□ -1
SS18-205ENST00000542420 MTFP1Q9UDX5 166 aa8.83□□□□□ -1
SS18-205ENST00000542420 COA3Q9Y2R0 106 aaPredicted RBP8.83□□□□□ -1
SS18-205ENST00000542420 KIF26BQ2KJY2 2108 aa8.83□□□□□ -1
SS18-205ENST00000542420 TRAV8-7A0A075B6U6 113 aa8.82□□□□□ -1
SS18-205ENST00000542420 MEIKINA0A087WXM9 373 aa8.82□□□□□ -1
SS18-205ENST00000542420 A0A0B4J203 849 aa8.82□□□□□ -1
SS18-205ENST00000542420 IGHV3-20A0A0C4DH32 117 aa8.82□□□□□ -1
SS18-205ENST00000542420 B4E171 279 aa8.82□□□□□ -1
SS18-205ENST00000542420 C9J4A7 227 aa8.82□□□□□ -1
SS18-205ENST00000542420 PSMD9O00233 223 aa8.82□□□□□ -1
SS18-205ENST00000542420 ZNF354AO60765 605 aaPredicted RBP8.82□□□□□ -1
SS18-205ENST00000542420 KLK3P07288 261 aaPredicted RBP8.82□□□□□ -1
SS18-205ENST00000542420 ZNF883P0CG24 379 aa8.82□□□□□ -1
SS18-205ENST00000542420 HOXB1P14653 301 aaPredicted RBP8.82□□□□□ -1
SS18-205ENST00000542420 CDK2P24941 298 aa8.82□□□□□ -1
SS18-205ENST00000542420 TSPAN7P41732 249 aa8.82□□□□□ -1
SS18-205ENST00000542420 SRP9P49458 86 aaKnown RBP8.82□□□□□ -1
SS18-205ENST00000542420 CLVS2Q5SYC1 327 aa8.82□□□□□ -1
SS18-205ENST00000542420 BCL2L15Q5TBC7 163 aa8.82□□□□□ -1
SS18-205ENST00000542420 TMEM225Q6GV28 225 aa8.82□□□□□ -1
SS18-205ENST00000542420 SPICQ8N5J4 248 aa8.82□□□□□ -1
SS18-205ENST00000542420 CCDC54Q8NEL0 328 aa8.82□□□□□ -1
SS18-205ENST00000542420 NOXO1Q8NFA2 376 aa8.82□□□□□ -1
SS18-205ENST00000542420 OR52I2Q8NH67 350 aa8.82□□□□□ -1
SS18-205ENST00000542420 POC1BQ8TC44 478 aa8.82□□□□□ -1
SS18-205ENST00000542420 OXGR1Q96P68 337 aa8.82□□□□□ -1
SS18-205ENST00000542420 RASL10BQ96S79 203 aa8.82□□□□□ -1
SS18-205ENST00000542420 BEX2Q9BXY8 128 aa8.82□□□□□ -1
SS18-205ENST00000542420 C20orf85Q9H1P6 137 aa8.82□□□□□ -1
SS18-205ENST00000542420 GAREM1Q9H706 876 aa8.82□□□□□ -1
SS18-205ENST00000542420 GALNT9Q9HCQ5 603 aa8.82□□□□□ -1
SS18-205ENST00000542420 G6PC2Q9NQR9 355 aa8.82□□□□□ -1
SS18-205ENST00000542420 MED11Q9P086 117 aa8.82□□□□□ -1
SS18-205ENST00000542420 MRPS7Q9Y2R9 242 aaKnown RBP8.82□□□□□ -1
SS18-205ENST00000542420 ASCC3Q8N3C0 2202 aaKnown RBP8.82□□□□□ -1
SS18-205ENST00000542420 GGT3PA6NGU5 568 aa8.82□□□□□ -1
SS18-205ENST00000542420 DNPH1O43598 174 aa8.82□□□□□ -1
SS18-205ENST00000542420 B3GALNT1O75752 331 aa8.82□□□□□ -1
SS18-205ENST00000542420 PMS2P2O95744 297 aa8.82□□□□□ -1
SS18-205ENST00000542420 PLGP00747 810 aaPredicted RBP8.82□□□□□ -1
SS18-205ENST00000542420 IGHG1P01857 330 aa8.82□□□□□ -1
SS18-205ENST00000542420 HOXD4P09016 255 aaPredicted RBP8.82□□□□□ -1
SS18-205ENST00000542420 MYF5P13349 255 aa8.82□□□□□ -1
SS18-205ENST00000542420 IFNGR1P15260 489 aa8.82□□□□□ -1
SS18-205ENST00000542420 ZNF17P17021 662 aa8.82□□□□□ -1
SS18-205ENST00000542420 SOX2P48431 317 aa8.82□□□□□ -1
SS18-205ENST00000542420 GSK3AP49840 483 aa8.82□□□□□ -1
SS18-205ENST00000542420 ZNF133P52736 654 aaPredicted RBP8.82□□□□□ -1
SS18-205ENST00000542420 SLC35A1P78382 337 aa8.82□□□□□ -1
SS18-205ENST00000542420 MADCAM1Q13477 382 aa8.82□□□□□ -1
SS18-205ENST00000542420 POU4F3Q15319 338 aa8.82□□□□□ -1
SS18-205ENST00000542420 SLC23A3Q6PIS1 610 aa8.82□□□□□ -1
SS18-205ENST00000542420 SEZ6L2Q6UXD5 910 aa8.82□□□□□ -1
SS18-205ENST00000542420 UEVLDQ8IX04 471 aa8.82□□□□□ -1
SS18-205ENST00000542420 OR10H5Q8NGA6 315 aa8.82□□□□□ -1
SS18-205ENST00000542420 IMMP1LQ96LU5 166 aa8.82□□□□□ -1
SS18-205ENST00000542420 C5orf34Q96MH7 638 aa8.82□□□□□ -1
SS18-205ENST00000542420 AUNIPQ9H7T9 357 aa8.82□□□□□ -1
SS18-205ENST00000542420 GPN1Q9HCN4 374 aaPredicted RBP8.82□□□□□ -1
SS18-205ENST00000542420 FBLN5Q9UBX5 448 aa8.82□□□□□ -1
SS18-205ENST00000542420 IGHV1-45A0A0A0MS14 117 aa8.81□□□□□ -1
SS18-205ENST00000542420 PCP4L1A6NKN8 68 aa8.81□□□□□ -1
SS18-205ENST00000542420 LAMTOR5O43504 91 aa8.81□□□□□ -1
SS18-205ENST00000542420 CTAG2O75638 210 aa8.81□□□□□ -1
SS18-205ENST00000542420 RBBP9O75884 186 aa8.81□□□□□ -1
SS18-205ENST00000542420 NDUFB6O95139 128 aa8.81□□□□□ -1
SS18-205ENST00000542420 VAMP5O95183 116 aa8.81□□□□□ -1
SS18-205ENST00000542420 LAP3P28838 519 aa8.81□□□□□ -1
SS18-205ENST00000542420 P2RY4P51582 365 aa8.81□□□□□ -1
SS18-205ENST00000542420 ACTBP60709 375 aa8.81□□□□□ -1
SS18-205ENST00000542420 ACTG1P63261 375 aa8.81□□□□□ -1
SS18-205ENST00000542420 POU3F1Q03052 451 aaPredicted RBP8.81□□□□□ -1
SS18-205ENST00000542420 MELKQ14680 651 aa8.81□□□□□ -1
SS18-205ENST00000542420 FCN2Q15485 313 aa8.81□□□□□ -1
SS18-205ENST00000542420 HIST3H3Q16695 136 aa8.81□□□□□ -1
SS18-205ENST00000542420 LRRC69Q6ZNQ3 347 aa8.81□□□□□ -1
SS18-205ENST00000542420 NDUFAF7Q7L592 441 aa8.81□□□□□ -1
SS18-205ENST00000542420 GTPBP8Q8N3Z3 284 aaPredicted RBP8.81□□□□□ -1
SS18-205ENST00000542420 SLC25A28Q96A46 364 aa8.81□□□□□ -1
SS18-205ENST00000542420 FAM3DQ96BQ1 224 aa8.81□□□□□ -1
SS18-205ENST00000542420 SLC25A44Q96H78 314 aaPredicted RBP8.81□□□□□ -1
SS18-205ENST00000542420 ARL5BQ96KC2 179 aa8.81□□□□□ -1
SS18-205ENST00000542420 C1orf198Q9H425 327 aa8.81□□□□□ -1
SS18-205ENST00000542420 B3GAT1Q9P2W7 334 aa8.81□□□□□ -1
SS18-205ENST00000542420 SLC23A1Q9UHI7 598 aa8.81□□□□□ -1
SS18-205ENST00000542420 CYB5R1Q9UHQ9 305 aa8.81□□□□□ -1
SS18-205ENST00000542420 OR52A1Q9UKL2 312 aa8.81□□□□□ -1
SS18-205ENST00000542420 RCE1Q9Y256 329 aa8.81□□□□□ -1
SS18-205ENST00000542420 CIB4A0PJX0 185 aa8.81□□□□□ -1
SS18-205ENST00000542420 LDLRAD4O15165 306 aa8.81□□□□□ -1
SS18-205ENST00000542420 TLX3O43711 291 aaPredicted RBP8.81□□□□□ -1
SS18-205ENST00000542420 PNPP00491 289 aa8.81□□□□□ -1
SS18-205ENST00000542420 ADRB1P08588 477 aa8.81□□□□□ -1
SS18-205ENST00000542420 HSD11B1P28845 292 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms