RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	PABPC1L2A	Q5JQF8	200 aa		5.11	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	ELFN2	Q5R3F8	820 aa		5.11	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	FAM69B	Q5VUD6	431 aa		5.11	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	MFSD12	Q6NUT3	480 aa		5.11	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	HAGHL	Q6PII5	290 aa	Predicted RBP	5.11	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	IGF2-AS	Q6U949	168 aa		5.11	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	BAIAP2L2	Q6UXY1	529 aa		5.11	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	SLC36A1	Q7Z2H8	476 aa		5.11	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	MISP	Q8IVT2	679 aa		5.11	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	GLB1L2	Q8IW92	636 aa		5.11	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	ZNF511	Q8NB15	262 aa		5.11	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	RGP1	Q92546	391 aa	Predicted RBP	5.11	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	DNAJA3	Q96EY1	480 aa		5.11	□□□□□ -1.59
RAPGEF4-215	ENST00000540783		Q96M85	177 aa		5.11	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	SDF2	Q99470	211 aa		5.11	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	TMPRSS13	Q9BYE2	586 aa		5.11	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	ZNF160	Q9HCG1	818 aa		5.11	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	TCF7L1	Q9HCS4	588 aa		5.11	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	FAM60A	Q9NP50	221 aa		5.11	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	INPP5E	Q9NRR6	644 aa		5.11	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	PPP4R1L	Q9P1A2	415 aa		5.11	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	SEMA5B	Q9P283	1151 aa		5.11	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	CES1P1	Q9UKY3	287 aa		5.11	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	TRAV18	A0A075B6X5	111 aa		5.11	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	FITM1	A5D6W6	292 aa		5.11	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	GJE1	A6NN92	205 aa		5.11	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	SNRPGP15	A8MWD9	76 aa		5.11	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	FAM25E	A8MYX2	175 aa		5.11	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	ZNF879	B4DU55	563 aa		5.11	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	RBBP9	O75884	186 aa		5.11	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	CD3D	P04234	171 aa		5.11	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	NGFR	P08138	427 aa		5.11	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	OR8G3P	P0DMU2	310 aa		5.11	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	CBR1	P16152	277 aa		5.11	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	ADRA2C	P18825	462 aa		5.11	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	ZNF41	P51814	821 aa	Predicted RBP	5.11	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	UNQ6126/PRO20091	Q6UXV3	157 aa		5.11	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	P4HA3	Q7Z4N8	544 aa		5.11	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	ZAR1	Q86SH2	424 aa		5.11	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	VASH2	Q86V25	355 aa		5.11	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	LDLRAD3	Q86YD5	345 aa		5.11	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	PUSL1	Q8N0Z8	303 aa	Known RBP	5.11	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	OR10AC1	Q8NH08	325 aa		5.11	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	M1AP	Q8TC57	530 aa		5.11	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	DNTTIP1	Q9H147	329 aa		5.11	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	ZMAT3	Q9HA38	289 aa	Known RBP	5.11	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	PLEKHA1	Q9HB21	404 aa		5.11	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	ASF1B	Q9NVP2	202 aa		5.11	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	ZMAT5	Q9UDW3	170 aa	Known RBP	5.11	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	PURG	Q9UJV8	347 aa	Known RBP	5.11	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	KLK13	Q9UKR3	277 aa		5.11	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	FBXL3	Q9UKT7	428 aa		5.11	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	ZNF106	Q9H2Y7	1883 aa	Known RBP	5.11	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	PKD1L2	Q7Z442	2459 aa		5.11	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	HMSD	A8MTL9	139 aa		5.11	□□□□□ -1.59
RAPGEF4-215	ENST00000540783		M0QYG6	137 aa		5.11	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	ADAM11	O75078	769 aa		5.11	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	IL5	P05113	134 aa		5.11	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	MPG	P29372	298 aa		5.11	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	CALCR	P30988	508 aa		5.11	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	GALNS	P34059	522 aa		5.11	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	EEF1A1	P68104	462 aa	Known RBP	5.11	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	FGL1	Q08830	312 aa		5.11	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	ZIC1	Q15915	447 aa		5.11	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	GALNT16	Q8N428	558 aa		5.11	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	OR51D1	Q8NGF3	324 aa		5.11	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	OR1S2	Q8NGQ3	325 aa		5.11	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	NSMAF	Q92636	917 aa		5.11	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	ZNF681	Q96N22	645 aa		5.11	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	CNN2	Q99439	309 aa	Known RBP	5.11	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	UQCC2	Q9BRT2	126 aa		5.11	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	SPTBN4	Q9H254	2564 aa		5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	ASXL3	Q9C0F0	2248 aa		5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	OBSL1	O75147	1896 aa		5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	TRAV14DV4	A0A0A6YYC5	116 aa		5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	TMEM200C	A6NKL6	621 aa		5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	TTLL8	A6PVC2	850 aa		5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	MCIDAS	D6RGH6	385 aa		5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	ZNF254	O75437	659 aa		5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	TRAPPC6A	O75865	159 aa		5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	AKR7A3	O95154	331 aa		5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	PVALB	P20472	110 aa	Predicted RBP	5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	NR0B1	P51843	470 aa	Known RBP	5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	PPP1CA	P62136	330 aa		5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	ACTC1	P68032	377 aa		5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	ACTA1	P68133	377 aa		5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	SRSF3	P84103	164 aa	Known RBP	5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	EXOSC7	Q15024	291 aa	Known RBP	5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	PON3	Q15166	354 aa		5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	OLFML2A	Q68BL7	652 aa		5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	RPL22L1	Q6P5R6	122 aa	Known RBP	5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	STAC2	Q6ZMT1	411 aa		5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	ZNF550	Q7Z398	422 aa		5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	VN1R4	Q7Z5H5	301 aa		5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	BEST3	Q8N1M1	668 aa		5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	NR4A3	Q92570	626 aa		5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	RASD2	Q96D21	266 aa		5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	HAVCR1	Q96D42	359 aa		5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	CPNE2	Q96FN4	548 aa	Predicted RBP	5.1	□□□□□ -1.59
RAPGEF4-215	ENST00000540783	MENT	Q9BUN1	341 aa		5.1	□□□□□ -1.59

Retrieved 100 of 20,778 RNA–protein pairs in 34 ms