RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 RP9Q8TA86 221 aaKnown RBP6.13□□□□□ -1.43
YBX3-209ENST00000540747 ST7LQ8TDW4 575 aa6.13□□□□□ -1.43
YBX3-209ENST00000540747 TMIGD2Q96BF3 282 aa6.13□□□□□ -1.43
YBX3-209ENST00000540747 CLPTM1LQ96KA5 538 aa6.13□□□□□ -1.43
YBX3-209ENST00000540747 DIRC2Q96SL1 478 aa6.13□□□□□ -1.43
YBX3-209ENST00000540747 MCHR1Q99705 422 aa6.13□□□□□ -1.43
YBX3-209ENST00000540747 PRSS27Q9BQR3 290 aa6.13□□□□□ -1.43
YBX3-209ENST00000540747 CPPED1Q9BRF8 314 aaPredicted RBP6.13□□□□□ -1.43
YBX3-209ENST00000540747 EGLN1Q9GZT9 426 aa6.13□□□□□ -1.43
YBX3-209ENST00000540747 WNT5BQ9H1J7 359 aa6.13□□□□□ -1.43
YBX3-209ENST00000540747 RNF121Q9H920 327 aa6.13□□□□□ -1.43
YBX3-209ENST00000540747 MSL2Q9HCI7 577 aa6.13□□□□□ -1.43
YBX3-209ENST00000540747 S100A14Q9HCY8 104 aa6.13□□□□□ -1.43
YBX3-209ENST00000540747 NANSQ9NR45 359 aa6.13□□□□□ -1.43
YBX3-209ENST00000540747 TMEM106BQ9NUM4 274 aa6.13□□□□□ -1.43
YBX3-209ENST00000540747 UBAP1Q9NZ09 502 aa6.13□□□□□ -1.43
YBX3-209ENST00000540747 SELENONQ9NZV5 590 aa6.13□□□□□ -1.43
YBX3-209ENST00000540747 EGFL7Q9UHF1 273 aa6.13□□□□□ -1.43
YBX3-209ENST00000540747 SCOCQ9UIL1 159 aa6.13□□□□□ -1.43
YBX3-209ENST00000540747 LRCH1Q9Y2L9 728 aa6.13□□□□□ -1.43
YBX3-209ENST00000540747 A0A1B0GUS0 222 aa6.12□□□□□ -1.43
YBX3-209ENST00000540747 MDFIC2A0A1B0GVS7 189 aa6.12□□□□□ -1.43
YBX3-209ENST00000540747 PLSCR5A0PG75 271 aa6.12□□□□□ -1.43
YBX3-209ENST00000540747 C5orf49A4QMS7 147 aa6.12□□□□□ -1.43
YBX3-209ENST00000540747 TRAPPC13A5PLN9 417 aa6.12□□□□□ -1.43
YBX3-209ENST00000540747 A6NHS1 94 aa6.12□□□□□ -1.43
YBX3-209ENST00000540747 CEACAM18A8MTB9 384 aa6.12□□□□□ -1.43
YBX3-209ENST00000540747 SERPINB7O75635 380 aa6.12□□□□□ -1.43
YBX3-209ENST00000540747 TRMUO75648 421 aaKnown RBP6.12□□□□□ -1.43
YBX3-209ENST00000540747 NDUFA7O95182 113 aa6.12□□□□□ -1.43
YBX3-209ENST00000540747 OR6A2O95222 327 aa6.12□□□□□ -1.43
YBX3-209ENST00000540747 SLC2A10O95528 541 aa6.12□□□□□ -1.43
YBX3-209ENST00000540747 IGF2P01344 180 aa6.12□□□□□ -1.43
YBX3-209ENST00000540747 WNT2P09544 360 aa6.12□□□□□ -1.43
YBX3-209ENST00000540747 SBK2P0C263 348 aa6.12□□□□□ -1.43
YBX3-209ENST00000540747 KITLGP21583 273 aa6.12□□□□□ -1.43
YBX3-209ENST00000540747 CPT2P23786 658 aa6.12□□□□□ -1.43
YBX3-209ENST00000540747 AQP1P29972 269 aa6.12□□□□□ -1.43
YBX3-209ENST00000540747 CDAP32320 146 aa6.12□□□□□ -1.43
YBX3-209ENST00000540747 ZNF84P51523 738 aa6.12□□□□□ -1.43
YBX3-209ENST00000540747 KRTAP10-3P60369 221 aa6.12□□□□□ -1.43
YBX3-209ENST00000540747 PPP1CBP62140 327 aa6.12□□□□□ -1.43
YBX3-209ENST00000540747 BTG1P62324 171 aa6.12□□□□□ -1.43
YBX3-209ENST00000540747 HSF2Q03933 536 aa6.12□□□□□ -1.43
YBX3-209ENST00000540747 FMODQ06828 376 aa6.12□□□□□ -1.43
YBX3-209ENST00000540747 PSG7Q13046 419 aa6.12□□□□□ -1.43
YBX3-209ENST00000540747 CYLC2Q14093 348 aaPredicted RBP6.12□□□□□ -1.43
YBX3-209ENST00000540747 MTX3Q5HYI7 312 aa6.12□□□□□ -1.43
YBX3-209ENST00000540747 ENTPD8Q5MY95 495 aa6.12□□□□□ -1.43
YBX3-209ENST00000540747 FAM27BQ5VT28 67 aa6.12□□□□□ -1.43
YBX3-209ENST00000540747 PGM2L1Q6PCE3 622 aa6.12□□□□□ -1.43
YBX3-209ENST00000540747 C16orf87Q6PH81 154 aa6.12□□□□□ -1.43
YBX3-209ENST00000540747 SLC25A47Q6Q0C1 308 aa6.12□□□□□ -1.43
YBX3-209ENST00000540747 DLEU7Q6UYE1 221 aa6.12□□□□□ -1.43
YBX3-209ENST00000540747 DEFB107AQ8IZN7 70 aa6.12□□□□□ -1.43
YBX3-209ENST00000540747 PARP8Q8N3A8 854 aa6.12□□□□□ -1.43
YBX3-209ENST00000540747 LRRC18Q8N456 261 aa6.12□□□□□ -1.43
YBX3-209ENST00000540747 SMYD1Q8NB12 490 aa6.12□□□□□ -1.43
YBX3-209ENST00000540747 HIPK4Q8NE63 616 aa6.12□□□□□ -1.43
YBX3-209ENST00000540747 AKR7LQ8NHP1 331 aa6.12□□□□□ -1.43
YBX3-209ENST00000540747 SLC26A7Q8TE54 656 aa6.12□□□□□ -1.43
YBX3-209ENST00000540747 ADAMTS16Q8TE57 1224 aa6.12□□□□□ -1.43
YBX3-209ENST00000540747 LIPHQ8WWY8 451 aa6.12□□□□□ -1.43
YBX3-209ENST00000540747 STON2Q8WXE9 905 aa6.12□□□□□ -1.43
YBX3-209ENST00000540747 HDAC2Q92769 488 aaKnown RBP6.12□□□□□ -1.43
YBX3-209ENST00000540747 MPP4Q96JB8 637 aa6.12□□□□□ -1.43
YBX3-209ENST00000540747 SAMD8Q96LT4 415 aa6.12□□□□□ -1.43
YBX3-209ENST00000540747 NR1H4Q96RI1 486 aaPredicted RBP6.12□□□□□ -1.43
YBX3-209ENST00000540747 ZNF607Q96SK3 696 aa6.12□□□□□ -1.43
YBX3-209ENST00000540747 ZNF184Q99676 751 aaPredicted RBP6.12□□□□□ -1.43
YBX3-209ENST00000540747 MRI1Q9BV20 369 aa6.12□□□□□ -1.43
YBX3-209ENST00000540747 OR2H1Q9GZK4 316 aa6.12□□□□□ -1.43
YBX3-209ENST00000540747 POFUT1Q9H488 388 aa6.12□□□□□ -1.43
YBX3-209ENST00000540747 EFCAB1Q9HAE3 211 aa6.12□□□□□ -1.43
YBX3-209ENST00000540747 MRGBPQ9NV56 204 aa6.12□□□□□ -1.43
YBX3-209ENST00000540747 IL20RAQ9UHF4 553 aa6.12□□□□□ -1.43
YBX3-209ENST00000540747 ZNF281Q9Y2X9 895 aa6.12□□□□□ -1.43
YBX3-209ENST00000540747 IGHV2-70DA0A0C4DH43 119 aa6.11□□□□□ -1.43
YBX3-209ENST00000540747 CPSF4LA6NMK7 179 aaKnown RBP6.11□□□□□ -1.43
YBX3-209ENST00000540747 SRRM5B3KS81 715 aa6.11□□□□□ -1.43
YBX3-209ENST00000540747 TMEM178BH3BS89 294 aa6.11□□□□□ -1.43
YBX3-209ENST00000540747 KPNA4O00629 521 aaPredicted RBP6.11□□□□□ -1.43
YBX3-209ENST00000540747 FSTL3O95633 263 aa6.11□□□□□ -1.43
YBX3-209ENST00000540747 F13BP05160 661 aa6.11□□□□□ -1.43
YBX3-209ENST00000540747 CST2P09228 141 aa6.11□□□□□ -1.43
YBX3-209ENST00000540747 OMGP23515 440 aa6.11□□□□□ -1.43
YBX3-209ENST00000540747 SLC6A2P23975 617 aa6.11□□□□□ -1.43
YBX3-209ENST00000540747 MDH2P40926 338 aaKnown RBP6.11□□□□□ -1.43
YBX3-209ENST00000540747 MTNR1AP48039 350 aa6.11□□□□□ -1.43
YBX3-209ENST00000540747 GDI2P50395 445 aaKnown RBP6.11□□□□□ -1.43
YBX3-209ENST00000540747 MMP16P51512 607 aa6.11□□□□□ -1.43
YBX3-209ENST00000540747 CLRN1P58418 232 aa6.11□□□□□ -1.43
YBX3-209ENST00000540747 TNFAIP6P98066 277 aaPredicted RBP6.11□□□□□ -1.43
YBX3-209ENST00000540747 ENDOGQ14249 297 aaKnown RBP6.11□□□□□ -1.43
YBX3-209ENST00000540747 MAPRE2Q15555 327 aa6.11□□□□□ -1.43
YBX3-209ENST00000540747 ZMAT1Q5H9K5 638 aa6.11□□□□□ -1.43
YBX3-209ENST00000540747 ASPHD2Q6ICH7 369 aa6.11□□□□□ -1.43
YBX3-209ENST00000540747 TTC33Q6PID6 262 aaPredicted RBP6.11□□□□□ -1.43
YBX3-209ENST00000540747 SPATC1Q76KD6 591 aa6.11□□□□□ -1.43
YBX3-209ENST00000540747 HDDC2Q7Z4H3 204 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms