RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 SLC6A9P48067 706 aa10.12□□□□□ -0.79
CBX3P4-202ENST00000540428 CTXN1P60606 82 aa10.12□□□□□ -0.79
CBX3P4-202ENST00000540428 BTG1P62324 171 aa10.12□□□□□ -0.79
CBX3P4-202ENST00000540428 SCRN3Q0VDG4 424 aa10.12□□□□□ -0.79
CBX3P4-202ENST00000540428 ENDOGQ14249 297 aaKnown RBP10.12□□□□□ -0.79
CBX3P4-202ENST00000540428 SPRNQ5BIV9 151 aa10.12□□□□□ -0.79
CBX3P4-202ENST00000540428 TTMPQ5BVD1 217 aa10.12□□□□□ -0.79
CBX3P4-202ENST00000540428 RABL3Q5HYI8 236 aa10.12□□□□□ -0.79
CBX3P4-202ENST00000540428 THOC1Q96FV9 657 aaKnown RBP10.12□□□□□ -0.79
CBX3P4-202ENST00000540428 COG8Q96MW5 612 aa10.12□□□□□ -0.79
CBX3P4-202ENST00000540428 DCLRE1CQ96SD1 692 aaKnown RBP10.12□□□□□ -0.79
CBX3P4-202ENST00000540428 MRI1Q9BV20 369 aa10.12□□□□□ -0.79
CBX3P4-202ENST00000540428 POLE4Q9NR33 117 aa10.12□□□□□ -0.79
CBX3P4-202ENST00000540428 MMP26Q9NRE1 261 aa10.12□□□□□ -0.79
CBX3P4-202ENST00000540428 DCAF16Q9NXF7 216 aa10.12□□□□□ -0.79
CBX3P4-202ENST00000540428 ZNF69Q9UC07 566 aa10.12□□□□□ -0.79
CBX3P4-202ENST00000540428 IL19Q9UHD0 177 aa10.12□□□□□ -0.79
CBX3P4-202ENST00000540428 EGFL7Q9UHF1 273 aa10.12□□□□□ -0.79
CBX3P4-202ENST00000540428 A4GNTQ9UNA3 340 aa10.12□□□□□ -0.79
CBX3P4-202ENST00000540428 INSIG2Q9Y5U4 225 aa10.12□□□□□ -0.79
CBX3P4-202ENST00000540428 A0A1W2PPL8 197 aa10.11□□□□□ -0.79
CBX3P4-202ENST00000540428 DNAJC9-AS1A6NH13 148 aa10.11□□□□□ -0.79
CBX3P4-202ENST00000540428 BBIP1A8MTZ0 92 aa10.11□□□□□ -0.79
CBX3P4-202ENST00000540428 TRAPPC2LH3BP13 241 aa10.11□□□□□ -0.79
CBX3P4-202ENST00000540428 CLDN34H7C241 214 aa10.11□□□□□ -0.79
CBX3P4-202ENST00000540428 J3QW42 95 aa10.11□□□□□ -0.79
CBX3P4-202ENST00000540428 IFNL4K9M1U5 179 aa10.11□□□□□ -0.79
CBX3P4-202ENST00000540428 AHCYL1O43865 530 aa10.11□□□□□ -0.79
CBX3P4-202ENST00000540428 PIP5K1CO60331 668 aa10.11□□□□□ -0.79
CBX3P4-202ENST00000540428 EDF1O60869 148 aaKnown RBP10.11□□□□□ -0.79
CBX3P4-202ENST00000540428 RNASE1P07998 156 aaKnown RBP10.11□□□□□ -0.79
CBX3P4-202ENST00000540428 PPIAL4GP0DN37 164 aa10.11□□□□□ -0.79
CBX3P4-202ENST00000540428 SLC9A3P48764 834 aa10.11□□□□□ -0.79
CBX3P4-202ENST00000540428 CYBRD1Q53TN4 286 aa10.11□□□□□ -0.79
CBX3P4-202ENST00000540428 KLF17Q5JT82 389 aaPredicted RBP10.11□□□□□ -0.79
CBX3P4-202ENST00000540428 ZNF771Q7L3S4 317 aaPredicted RBP10.11□□□□□ -0.79
CBX3P4-202ENST00000540428 MUC20Q8N307 709 aaPredicted RBP10.11□□□□□ -0.79
CBX3P4-202ENST00000540428 CLDN22Q8N7P3 220 aa10.11□□□□□ -0.79
CBX3P4-202ENST00000540428 FAM156AQ8NDB6 213 aa10.11□□□□□ -0.79
CBX3P4-202ENST00000540428 ZNF583Q96ND8 569 aa10.11□□□□□ -0.79
CBX3P4-202ENST00000540428 SIGLEC11Q96RL6 698 aa10.11□□□□□ -0.79
CBX3P4-202ENST00000540428 A0A0G2JND7 137 aa10.1□□□□□ -0.79
CBX3P4-202ENST00000540428 POM121CA8CG34 1229 aa10.1□□□□□ -0.79
CBX3P4-202ENST00000540428 FAM220BPB1ANY3 271 aa10.1□□□□□ -0.79
CBX3P4-202ENST00000540428 KCNAB3O43448 404 aa10.1□□□□□ -0.79
CBX3P4-202ENST00000540428 DOK2O60496 412 aa10.1□□□□□ -0.79
CBX3P4-202ENST00000540428 KDELR2P33947 212 aa10.1□□□□□ -0.79
CBX3P4-202ENST00000540428 MDH2P40926 338 aaKnown RBP10.1□□□□□ -0.79
CBX3P4-202ENST00000540428 SELENOWP63302 87 aa10.1□□□□□ -0.79
CBX3P4-202ENST00000540428 IL13RA1P78552 427 aa10.1□□□□□ -0.79
CBX3P4-202ENST00000540428 PRKCDQ05655 676 aa10.1□□□□□ -0.79
CBX3P4-202ENST00000540428 PAX8Q06710 450 aa10.1□□□□□ -0.79
CBX3P4-202ENST00000540428 BAMBIQ13145 260 aa10.1□□□□□ -0.79
CBX3P4-202ENST00000540428 FHL1Q13642 323 aa10.1□□□□□ -0.79
CBX3P4-202ENST00000540428 ESCO2Q56NI9 601 aa10.1□□□□□ -0.79
CBX3P4-202ENST00000540428 Q6ZR03 302 aa10.1□□□□□ -0.79
CBX3P4-202ENST00000540428 OAFQ86UD1 273 aa10.1□□□□□ -0.79
CBX3P4-202ENST00000540428 RNF113BQ8IZP6 322 aaKnown RBP10.1□□□□□ -0.79
CBX3P4-202ENST00000540428 OFCC1Q8IZS5 231 aa10.1□□□□□ -0.79
CBX3P4-202ENST00000540428 OR2Z1Q8NG97 314 aa10.1□□□□□ -0.79
CBX3P4-202ENST00000540428 OR51A7Q8NH64 312 aa10.1□□□□□ -0.79
CBX3P4-202ENST00000540428 C10orf82Q8WW14 230 aa10.1□□□□□ -0.79
CBX3P4-202ENST00000540428 HAVCR1Q96D42 359 aa10.1□□□□□ -0.79
CBX3P4-202ENST00000540428 CMBLQ96DG6 245 aa10.1□□□□□ -0.79
CBX3P4-202ENST00000540428 C1orf147Q96MC9 270 aaPredicted RBP10.1□□□□□ -0.79
CBX3P4-202ENST00000540428 OR5V1Q9UGF6 321 aa10.1□□□□□ -0.79
CBX3P4-202ENST00000540428 IL20RAQ9UHF4 553 aa10.1□□□□□ -0.79
CBX3P4-202ENST00000540428 PPP1R3CQ9UQK1 317 aa10.1□□□□□ -0.79
CBX3P4-202ENST00000540428 LRCH1Q9Y2L9 728 aa10.1□□□□□ -0.79
CBX3P4-202ENST00000540428 TANC2Q9HCD6 1990 aa10.1□□□□□ -0.79
CBX3P4-202ENST00000540428 TRAV27A0A087WT01 109 aa10.09□□□□□ -0.79
CBX3P4-202ENST00000540428 EFCAB9A8MZ26 197 aa10.09□□□□□ -0.79
CBX3P4-202ENST00000540428 HMGB1P1B2RPK0 211 aaPredicted RBP10.09□□□□□ -0.79
CBX3P4-202ENST00000540428 TMEM178BH3BS89 294 aa10.09□□□□□ -0.79
CBX3P4-202ENST00000540428 MRASO14807 208 aa10.09□□□□□ -0.79
CBX3P4-202ENST00000540428 SGCEO43556 437 aa10.09□□□□□ -0.79
CBX3P4-202ENST00000540428 FSTL3O95633 263 aa10.09□□□□□ -0.79
CBX3P4-202ENST00000540428 SCG5P05408 212 aa10.09□□□□□ -0.79
CBX3P4-202ENST00000540428 RAC2P15153 192 aa10.09□□□□□ -0.79
CBX3P4-202ENST00000540428 HTR5AP47898 357 aa10.09□□□□□ -0.79
CBX3P4-202ENST00000540428 MTNR1AP48039 350 aa10.09□□□□□ -0.79
CBX3P4-202ENST00000540428 SEC61A1P61619 476 aaKnown RBP10.09□□□□□ -0.79
CBX3P4-202ENST00000540428 GUCY1A3Q02108 690 aa10.09□□□□□ -0.79
CBX3P4-202ENST00000540428 AQP6Q13520 282 aa10.09□□□□□ -0.79
CBX3P4-202ENST00000540428 TRAM2Q15035 370 aa10.09□□□□□ -0.79
CBX3P4-202ENST00000540428 ZMYND11Q15326 602 aa10.09□□□□□ -0.79
CBX3P4-202ENST00000540428 MAPRE2Q15555 327 aa10.09□□□□□ -0.79
CBX3P4-202ENST00000540428 LRRC23Q53EV4 343 aaPredicted RBP10.09□□□□□ -0.79
CBX3P4-202ENST00000540428 SLC27A4Q6P1M0 643 aa10.09□□□□□ -0.79
CBX3P4-202ENST00000540428 LRRN1Q6UXK5 716 aa10.09□□□□□ -0.79
CBX3P4-202ENST00000540428 C9orf139Q6ZV77 190 aa10.09□□□□□ -0.79
CBX3P4-202ENST00000540428 IGFN1Q86VF2 1251 aa10.09□□□□□ -0.79
CBX3P4-202ENST00000540428 NRMQ8IXM6 262 aa10.09□□□□□ -0.79
CBX3P4-202ENST00000540428 PCYOX1LQ8NBM8 494 aa10.09□□□□□ -0.79
CBX3P4-202ENST00000540428 ITLN1Q8WWA0 313 aa10.09□□□□□ -0.79
CBX3P4-202ENST00000540428 LZICQ8WZA0 190 aa10.09□□□□□ -0.79
CBX3P4-202ENST00000540428 PTP4A1Q93096 173 aa10.09□□□□□ -0.79
CBX3P4-202ENST00000540428 SLC25A28Q96A46 364 aa10.09□□□□□ -0.79
CBX3P4-202ENST00000540428 TPD52L3Q96J77 140 aa10.09□□□□□ -0.79
CBX3P4-202ENST00000540428 ZNF48Q96MX3 618 aaPredicted RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms