RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 ZNF649Q9BS31 505 aa16.55■□□□□ 0.24
TNFRSF1A-213ENST00000540022 CCNB1IP1Q9NPC3 277 aa16.55■□□□□ 0.24
TNFRSF1A-213ENST00000540022 GALNT8Q9NY28 637 aa16.55■□□□□ 0.24
TNFRSF1A-213ENST00000540022 ELOVL5Q9NYP7 299 aa16.55■□□□□ 0.24
TNFRSF1A-213ENST00000540022 UNC79Q9P2D8 2635 aa16.54■□□□□ 0.24
TNFRSF1A-213ENST00000540022 ZNF503-AS2A6NEH8 195 aa16.54■□□□□ 0.24
TNFRSF1A-213ENST00000540022 TMCC2O75069 709 aa16.54■□□□□ 0.24
TNFRSF1A-213ENST00000540022 MT-ND2P03891 347 aa16.54■□□□□ 0.24
TNFRSF1A-213ENST00000540022 CD79BP40259 229 aa16.54■□□□□ 0.24
TNFRSF1A-213ENST00000540022 ACTC1P68032 377 aa16.54■□□□□ 0.24
TNFRSF1A-213ENST00000540022 ACTA1P68133 377 aa16.54■□□□□ 0.24
TNFRSF1A-213ENST00000540022 ZNF85Q03923 595 aa16.54■□□□□ 0.24
TNFRSF1A-213ENST00000540022 AQP6Q13520 282 aa16.54■□□□□ 0.24
TNFRSF1A-213ENST00000540022 PRSS48Q7RTY5 328 aa16.54■□□□□ 0.24
TNFRSF1A-213ENST00000540022 DCXRQ7Z4W1 244 aa16.54■□□□□ 0.24
TNFRSF1A-213ENST00000540022 LHFPL3Q86UP9 236 aa16.54■□□□□ 0.24
TNFRSF1A-213ENST00000540022 CA5BP1Q8WTZ4 195 aa16.54■□□□□ 0.24
TNFRSF1A-213ENST00000540022 THEM6Q8WUY1 208 aa16.54■□□□□ 0.24
TNFRSF1A-213ENST00000540022 MAP6Q96JE9 813 aa16.54■□□□□ 0.24
TNFRSF1A-213ENST00000540022 MNTQ99583 582 aa16.54■□□□□ 0.24
TNFRSF1A-213ENST00000540022 ABHD6Q9BV23 337 aa16.54■□□□□ 0.24
TNFRSF1A-213ENST00000540022 JAM3Q9BX67 310 aa16.54■□□□□ 0.24
TNFRSF1A-213ENST00000540022 TTTY10Q9BZA0 68 aa16.54■□□□□ 0.24
TNFRSF1A-213ENST00000540022 CCDC90BQ9GZT6 254 aa16.54■□□□□ 0.24
TNFRSF1A-213ENST00000540022 LAMP5Q9UJQ1 280 aa16.54■□□□□ 0.24
TNFRSF1A-213ENST00000540022 GDF2Q9UK05 429 aaPredicted RBP16.54■□□□□ 0.24
TNFRSF1A-213ENST00000540022 INTS1Q8N201 2190 aaKnown RBP16.54■□□□□ 0.24
TNFRSF1A-213ENST00000540022 DAPL1A0PJW8 107 aa16.53■□□□□ 0.24
TNFRSF1A-213ENST00000540022 NKX2-6A6NCS4 301 aa16.53■□□□□ 0.24
TNFRSF1A-213ENST00000540022 PRR32B1ATL7 298 aa16.53■□□□□ 0.24
TNFRSF1A-213ENST00000540022 ZNF670-ZNF695F2Z2N8 137 aa16.53■□□□□ 0.24
TNFRSF1A-213ENST00000540022 RER1O15258 196 aa16.53■□□□□ 0.24
TNFRSF1A-213ENST00000540022 WNT11O96014 354 aa16.53■□□□□ 0.24
TNFRSF1A-213ENST00000540022 HLA-HP01893 362 aa16.53■□□□□ 0.24
TNFRSF1A-213ENST00000540022 LIMS3P0CW19 117 aa16.53■□□□□ 0.24
TNFRSF1A-213ENST00000540022 LIMS4P0CW20 117 aa16.53■□□□□ 0.24
TNFRSF1A-213ENST00000540022 ZNF32P17041 273 aa16.53■□□□□ 0.24
TNFRSF1A-213ENST00000540022 ETV1P50549 477 aa16.53■□□□□ 0.24
TNFRSF1A-213ENST00000540022 ASCL1P50553 236 aa16.53■□□□□ 0.24
TNFRSF1A-213ENST00000540022 TUBA1BP68363 451 aa16.53■□□□□ 0.24
TNFRSF1A-213ENST00000540022 TUBA4AP68366 448 aa16.53■□□□□ 0.24
TNFRSF1A-213ENST00000540022 EIF2B1Q14232 305 aaKnown RBP16.53■□□□□ 0.24
TNFRSF1A-213ENST00000540022 OR7E24Q6IFN5 339 aa16.53■□□□□ 0.24
TNFRSF1A-213ENST00000540022 CFAP77Q6ZQR2 320 aa16.53■□□□□ 0.24
TNFRSF1A-213ENST00000540022 TUBA1AQ71U36 451 aa16.53■□□□□ 0.24
TNFRSF1A-213ENST00000540022 ZNF454Q8N9F8 522 aa16.53■□□□□ 0.24
TNFRSF1A-213ENST00000540022 OR2AJ1Q8NGZ0 328 aa16.53■□□□□ 0.24
TNFRSF1A-213ENST00000540022 ST7LQ8TDW4 575 aa16.53■□□□□ 0.24
TNFRSF1A-213ENST00000540022 ERVK13-1Q9NX77 482 aa16.53■□□□□ 0.24
TNFRSF1A-213ENST00000540022 CLEC2DQ9UHP7 191 aa16.53■□□□□ 0.24
TNFRSF1A-213ENST00000540022 TMEM14AQ9Y6G1 99 aa16.53■□□□□ 0.24
TNFRSF1A-213ENST00000540022 MMP7P09237 267 aaPredicted RBP16.52■□□□□ 0.24
TNFRSF1A-213ENST00000540022 IL32P24001 234 aa16.52■□□□□ 0.24
TNFRSF1A-213ENST00000540022 CCKARP32238 428 aa16.52■□□□□ 0.24
TNFRSF1A-213ENST00000540022 CAPZA2P47755 286 aa16.52■□□□□ 0.24
TNFRSF1A-213ENST00000540022 HIST1H3AP68431 136 aa16.52■□□□□ 0.24
TNFRSF1A-213ENST00000540022 HIST2H3PS2Q5TEC6 136 aa16.52■□□□□ 0.24
TNFRSF1A-213ENST00000540022 TMEM154Q6P9G4 183 aa16.52■□□□□ 0.24
TNFRSF1A-213ENST00000540022 HIST2H3AQ71DI3 136 aa16.52■□□□□ 0.24
TNFRSF1A-213ENST00000540022 OR10S1Q8NGN2 331 aa16.52■□□□□ 0.24
TNFRSF1A-213ENST00000540022 CDCA4Q9BXL8 241 aa16.52■□□□□ 0.24
TNFRSF1A-213ENST00000540022 HDHD5Q9BXW7 423 aa16.52■□□□□ 0.24
TNFRSF1A-213ENST00000540022 KCNN2Q9H2S1 579 aa16.52■□□□□ 0.24
TNFRSF1A-213ENST00000540022 C1orf198Q9H425 327 aa16.52■□□□□ 0.24
TNFRSF1A-213ENST00000540022 NOX3Q9HBY0 568 aa16.52■□□□□ 0.24
TNFRSF1A-213ENST00000540022 SLC17A5Q9NRA2 495 aa16.52■□□□□ 0.24
TNFRSF1A-213ENST00000540022 EXOSC1Q9Y3B2 195 aaKnown RBP16.52■□□□□ 0.24
TNFRSF1A-213ENST00000540022 CELSR2Q9HCU4 2923 aa16.52■□□□□ 0.23
TNFRSF1A-213ENST00000540022 A0A1W2PR80 420 aa16.51■□□□□ 0.23
TNFRSF1A-213ENST00000540022 OR5H1A6NKK0 313 aa16.51■□□□□ 0.23
TNFRSF1A-213ENST00000540022 MAGEB4O15481 346 aaPredicted RBP16.51■□□□□ 0.23
TNFRSF1A-213ENST00000540022 MYL12AP19105 171 aa16.51■□□□□ 0.23
TNFRSF1A-213ENST00000540022 GALEQ14376 348 aa16.51■□□□□ 0.23
TNFRSF1A-213ENST00000540022 IRF3Q14653 427 aa16.51■□□□□ 0.23
TNFRSF1A-213ENST00000540022 FBXL19-AS1Q494R0 122 aa16.51■□□□□ 0.23
TNFRSF1A-213ENST00000540022 SLC36A2Q495M3 483 aa16.51■□□□□ 0.23
TNFRSF1A-213ENST00000540022 ZNF773Q6PK81 442 aa16.51■□□□□ 0.23
TNFRSF1A-213ENST00000540022 ZNF322Q6U7Q0 402 aaPredicted RBP16.51■□□□□ 0.23
TNFRSF1A-213ENST00000540022 SYT9Q86SS6 491 aa16.51■□□□□ 0.23
TNFRSF1A-213ENST00000540022 C17orf78Q8N4C9 275 aa16.51■□□□□ 0.23
TNFRSF1A-213ENST00000540022 WDR31Q8NA23 367 aa16.51■□□□□ 0.23
TNFRSF1A-213ENST00000540022 TSPAN14Q8NG11 270 aa16.51■□□□□ 0.23
TNFRSF1A-213ENST00000540022 INPP5EQ9NRR6 644 aa16.51■□□□□ 0.23
TNFRSF1A-213ENST00000540022 B3GNT2Q9NY97 397 aa16.51■□□□□ 0.23
TNFRSF1A-213ENST00000540022 TIMM10BQ9Y5J6 103 aa16.51■□□□□ 0.23
TNFRSF1A-213ENST00000540022 MAGEA13PA6NCF6 341 aa16.5■□□□□ 0.23
TNFRSF1A-213ENST00000540022 PSMD9O00233 223 aa16.5■□□□□ 0.23
TNFRSF1A-213ENST00000540022 MRPS14O60783 128 aaKnown RBP16.5■□□□□ 0.23
TNFRSF1A-213ENST00000540022 CD79AP11912 226 aa16.5■□□□□ 0.23
TNFRSF1A-213ENST00000540022 HOXB1P14653 301 aaPredicted RBP16.5■□□□□ 0.23
TNFRSF1A-213ENST00000540022 COL8A1P27658 744 aa16.5■□□□□ 0.23
TNFRSF1A-213ENST00000540022 UGT2B10P36537 528 aa16.5■□□□□ 0.23
TNFRSF1A-213ENST00000540022 UBE2NP61088 152 aaKnown RBP16.5■□□□□ 0.23
TNFRSF1A-213ENST00000540022 PCBD1P61457 104 aa16.5■□□□□ 0.23
TNFRSF1A-213ENST00000540022 PSG4Q00888 419 aa16.5■□□□□ 0.23
TNFRSF1A-213ENST00000540022 CCDC92Q53HC0 331 aaPredicted RBP16.5■□□□□ 0.23
TNFRSF1A-213ENST00000540022 XKRXQ6PP77 449 aa16.5■□□□□ 0.23
TNFRSF1A-213ENST00000540022 SPATC1Q76KD6 591 aa16.5■□□□□ 0.23
TNFRSF1A-213ENST00000540022 SPARTQ8N0X7 666 aa16.5■□□□□ 0.23
TNFRSF1A-213ENST00000540022 GJC3Q8NFK1 279 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms