RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 ASB10Q8WXI3 467 aa9.71□□□□□ -0.86
CLSTN3-209ENST00000539982 DYRK2Q92630 601 aa9.71□□□□□ -0.86
CLSTN3-209ENST00000539982 OR2H1Q9GZK4 316 aa9.71□□□□□ -0.86
CLSTN3-209ENST00000539982 NSRP1Q9H0G5 558 aaKnown RBP9.71□□□□□ -0.86
CLSTN3-209ENST00000539982 WNT5BQ9H1J7 359 aa9.71□□□□□ -0.86
CLSTN3-209ENST00000539982 SMURF2Q9HAU4 748 aa9.71□□□□□ -0.86
CLSTN3-209ENST00000539982 TUBG2Q9NRH3 451 aa9.71□□□□□ -0.86
CLSTN3-209ENST00000539982 TIMM10BQ9Y5J6 103 aa9.71□□□□□ -0.86
CLSTN3-209ENST00000539982 MCIDASD6RGH6 385 aa9.7□□□□□ -0.86
CLSTN3-209ENST00000539982 LYPD3O95274 346 aa9.7□□□□□ -0.86
CLSTN3-209ENST00000539982 SLC2A10O95528 541 aa9.7□□□□□ -0.86
CLSTN3-209ENST00000539982 F13BP05160 661 aa9.7□□□□□ -0.86
CLSTN3-209ENST00000539982 THRBP10828 461 aa9.7□□□□□ -0.86
CLSTN3-209ENST00000539982 UMPSP11172 480 aa9.7□□□□□ -0.86
CLSTN3-209ENST00000539982 GSTM3P21266 225 aa9.7□□□□□ -0.86
CLSTN3-209ENST00000539982 KITLGP21583 273 aa9.7□□□□□ -0.86
CLSTN3-209ENST00000539982 SLC6A2P23975 617 aa9.7□□□□□ -0.86
CLSTN3-209ENST00000539982 UGT2B15P54855 530 aa9.7□□□□□ -0.86
CLSTN3-209ENST00000539982 FGF12P61328 243 aa9.7□□□□□ -0.86
CLSTN3-209ENST00000539982 SCARB2Q14108 478 aa9.7□□□□□ -0.86
CLSTN3-209ENST00000539982 TAF11Q15544 211 aa9.7□□□□□ -0.86
CLSTN3-209ENST00000539982 ENTPD8Q5MY95 495 aa9.7□□□□□ -0.86
CLSTN3-209ENST00000539982 NANOGNBQ7Z5D8 188 aa9.7□□□□□ -0.86
CLSTN3-209ENST00000539982 CPLX4Q7Z7G2 160 aa9.7□□□□□ -0.86
CLSTN3-209ENST00000539982 C10orf111Q8N326 155 aa9.7□□□□□ -0.86
CLSTN3-209ENST00000539982 OR9I1Q8NGQ6 314 aa9.7□□□□□ -0.86
CLSTN3-209ENST00000539982 VANGL1Q8TAA9 524 aaPredicted RBP9.7□□□□□ -0.86
CLSTN3-209ENST00000539982 TBC1D15Q8TC07 691 aa9.7□□□□□ -0.86
CLSTN3-209ENST00000539982 SSMEM1Q8WWF3 244 aa9.7□□□□□ -0.86
CLSTN3-209ENST00000539982 NEIL1Q96FI4 390 aaPredicted RBP9.7□□□□□ -0.86
CLSTN3-209ENST00000539982 MAELQ96JY0 434 aaKnown RBP9.7□□□□□ -0.86
CLSTN3-209ENST00000539982 NUDT16L1Q9BRJ7 211 aaKnown RBP9.7□□□□□ -0.86
CLSTN3-209ENST00000539982 GCM1Q9NP62 436 aa9.7□□□□□ -0.86
CLSTN3-209ENST00000539982 SLC25A37Q9NYZ2 338 aa9.7□□□□□ -0.86
CLSTN3-209ENST00000539982 STX18Q9P2W9 335 aaKnown RBP9.7□□□□□ -0.86
CLSTN3-209ENST00000539982 DOCK11Q5JSL3 2073 aa9.7□□□□□ -0.86
CLSTN3-209ENST00000539982 IGKV1D-43A0A0B4J1Z2 117 aa9.69□□□□□ -0.86
CLSTN3-209ENST00000539982 C5orf63A6NC05 138 aa9.69□□□□□ -0.86
CLSTN3-209ENST00000539982 CPSF4LA6NMK7 179 aaKnown RBP9.69□□□□□ -0.86
CLSTN3-209ENST00000539982 M0R3H8 397 aa9.69□□□□□ -0.86
CLSTN3-209ENST00000539982 KPNA4O00629 521 aaPredicted RBP9.69□□□□□ -0.86
CLSTN3-209ENST00000539982 TNFRSF13BO14836 293 aaPredicted RBP9.69□□□□□ -0.86
CLSTN3-209ENST00000539982 UBDO15205 165 aa9.69□□□□□ -0.86
CLSTN3-209ENST00000539982 EDF1O60869 148 aaKnown RBP9.69□□□□□ -0.86
CLSTN3-209ENST00000539982 FSTL3O95633 263 aa9.69□□□□□ -0.86
CLSTN3-209ENST00000539982 FAM107AO95990 144 aa9.69□□□□□ -0.86
CLSTN3-209ENST00000539982 THY1P04216 161 aa9.69□□□□□ -0.86
CLSTN3-209ENST00000539982 CST2P09228 141 aa9.69□□□□□ -0.86
CLSTN3-209ENST00000539982 PPIBP23284 216 aaKnown RBP9.69□□□□□ -0.86
CLSTN3-209ENST00000539982 AQP1P29972 269 aa9.69□□□□□ -0.86
CLSTN3-209ENST00000539982 DAP3P51398 398 aaKnown RBP9.69□□□□□ -0.86
CLSTN3-209ENST00000539982 MMP16P51512 607 aa9.69□□□□□ -0.86
CLSTN3-209ENST00000539982 PCBD1P61457 104 aa9.69□□□□□ -0.86
CLSTN3-209ENST00000539982 RPL18Q07020 188 aaKnown RBP9.69□□□□□ -0.86
CLSTN3-209ENST00000539982 BEAN1Q3B7T3 259 aa9.69□□□□□ -0.86
CLSTN3-209ENST00000539982 ARMC4Q5T2S8 1044 aa9.69□□□□□ -0.86
CLSTN3-209ENST00000539982 LRIF1Q5T3J3 769 aa9.69□□□□□ -0.86
CLSTN3-209ENST00000539982 SLC25A47Q6Q0C1 308 aa9.69□□□□□ -0.86
CLSTN3-209ENST00000539982 Q6ZPA2 131 aa9.69□□□□□ -0.86
CLSTN3-209ENST00000539982 MSRB3Q8IXL7 192 aa9.69□□□□□ -0.86
CLSTN3-209ENST00000539982 FITM2Q8N6M3 262 aa9.69□□□□□ -0.86
CLSTN3-209ENST00000539982 SMYD1Q8NB12 490 aa9.69□□□□□ -0.86
CLSTN3-209ENST00000539982 NPEPL1Q8NDH3 523 aa9.69□□□□□ -0.86
CLSTN3-209ENST00000539982 OR6T1Q8NGN1 323 aa9.69□□□□□ -0.86
CLSTN3-209ENST00000539982 NSMAFQ92636 917 aa9.69□□□□□ -0.86
CLSTN3-209ENST00000539982 HAVCR1Q96D42 359 aa9.69□□□□□ -0.86
CLSTN3-209ENST00000539982 NMD3Q96D46 503 aaKnown RBP9.69□□□□□ -0.86
CLSTN3-209ENST00000539982 CMBLQ96DG6 245 aa9.69□□□□□ -0.86
CLSTN3-209ENST00000539982 MPP4Q96JB8 637 aa9.69□□□□□ -0.86
CLSTN3-209ENST00000539982 OR2V2Q96R30 315 aa9.69□□□□□ -0.86
CLSTN3-209ENST00000539982 TMEM246Q9BRR3 403 aa9.69□□□□□ -0.86
CLSTN3-209ENST00000539982 ZNF426Q9BUY5 554 aa9.69□□□□□ -0.86
CLSTN3-209ENST00000539982 FAM107BQ9H098 131 aa9.69□□□□□ -0.86
CLSTN3-209ENST00000539982 RABEP2Q9H5N1 569 aa9.69□□□□□ -0.86
CLSTN3-209ENST00000539982 TMEM38AQ9H6F2 299 aa9.69□□□□□ -0.86
CLSTN3-209ENST00000539982 INIPQ9NRY2 104 aa9.69□□□□□ -0.86
CLSTN3-209ENST00000539982 FGFR1OP2Q9NVK5 253 aa9.69□□□□□ -0.86
CLSTN3-209ENST00000539982 TBCCD1Q9NVR7 557 aa9.69□□□□□ -0.86
CLSTN3-209ENST00000539982 THAP1Q9NVV9 213 aa9.69□□□□□ -0.86
CLSTN3-209ENST00000539982 SLC7A7Q9UM01 511 aa9.69□□□□□ -0.86
CLSTN3-209ENST00000539982 GMEB1Q9Y692 573 aa9.69□□□□□ -0.86
CLSTN3-209ENST00000539982 TRAPPC13A5PLN9 417 aa9.68□□□□□ -0.86
CLSTN3-209ENST00000539982 C3orf80F5H4A9 247 aa9.68□□□□□ -0.86
CLSTN3-209ENST00000539982 PIN1P1O15428 100 aa9.68□□□□□ -0.86
CLSTN3-209ENST00000539982 GPR137BO60478 399 aa9.68□□□□□ -0.86
CLSTN3-209ENST00000539982 SNNO75324 88 aaPredicted RBP9.68□□□□□ -0.86
CLSTN3-209ENST00000539982 ZNF205O95201 554 aa9.68□□□□□ -0.86
CLSTN3-209ENST00000539982 ABHD16AO95870 558 aa9.68□□□□□ -0.86
CLSTN3-209ENST00000539982 KITP10721 976 aa9.68□□□□□ -0.86
CLSTN3-209ENST00000539982 GPX2P18283 190 aa9.68□□□□□ -0.86
CLSTN3-209ENST00000539982 FUT1P19526 365 aa9.68□□□□□ -0.86
CLSTN3-209ENST00000539982 LAP3P28838 519 aa9.68□□□□□ -0.86
CLSTN3-209ENST00000539982 FMODQ06828 376 aa9.68□□□□□ -0.86
CLSTN3-209ENST00000539982 NPTX1Q15818 432 aa9.68□□□□□ -0.86
CLSTN3-209ENST00000539982 DUSP7Q16829 419 aa9.68□□□□□ -0.86
CLSTN3-209ENST00000539982 C2orf68Q2NKX9 166 aa9.68□□□□□ -0.86
CLSTN3-209ENST00000539982 ZNF404Q494X3 552 aa9.68□□□□□ -0.86
CLSTN3-209ENST00000539982 KPRPQ5T749 579 aaPredicted RBP9.68□□□□□ -0.86
CLSTN3-209ENST00000539982 RUSC1-AS1Q66K80 236 aa9.68□□□□□ -0.86
CLSTN3-209ENST00000539982 NLRC3Q7RTR2 1065 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms