RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 LMAN2LQ9H0V9 348 aa6.04□□□□□ -1.44
USP28-207ENST00000538475 PRDM13Q9H4Q3 707 aa6.04□□□□□ -1.44
USP28-207ENST00000538475 GP6Q9HCN6 339 aa6.04□□□□□ -1.44
USP28-207ENST00000538475 RPS10P5Q9NQ39 176 aa6.04□□□□□ -1.44
USP28-207ENST00000538475 FAM212BQ9NTI7 297 aaPredicted RBP6.04□□□□□ -1.44
USP28-207ENST00000538475 AP5S1Q9NUS5 200 aa6.04□□□□□ -1.44
USP28-207ENST00000538475 POT1Q9NUX5 634 aa6.04□□□□□ -1.44
USP28-207ENST00000538475 C2orf42Q9NWW7 574 aa6.04□□□□□ -1.44
USP28-207ENST00000538475 B4GALT6Q9UBX8 382 aa6.04□□□□□ -1.44
USP28-207ENST00000538475 CHRNA9Q9UGM1 479 aa6.04□□□□□ -1.44
USP28-207ENST00000538475 KCNG2Q9UJ96 466 aa6.04□□□□□ -1.44
USP28-207ENST00000538475 GNG8Q9UK08 70 aa6.04□□□□□ -1.44
USP28-207ENST00000538475 PADI3Q9ULW8 664 aa6.04□□□□□ -1.44
USP28-207ENST00000538475 CA14Q9ULX7 337 aa6.04□□□□□ -1.44
USP28-207ENST00000538475 SLC7A7Q9UM01 511 aa6.04□□□□□ -1.44
USP28-207ENST00000538475 GPR34Q9UPC5 381 aa6.04□□□□□ -1.44
USP28-207ENST00000538475 SLC27A6Q9Y2P4 619 aa6.04□□□□□ -1.44
USP28-207ENST00000538475 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.04□□□□□ -1.44
USP28-207ENST00000538475 TRAV18A0A075B6X5 111 aa6.03□□□□□ -1.44
USP28-207ENST00000538475 A0A087X0M5 115 aa6.03□□□□□ -1.44
USP28-207ENST00000538475 A0A1B0GV90 55 aa6.03□□□□□ -1.44
USP28-207ENST00000538475 A0A1B0GX30 115 aa6.03□□□□□ -1.44
USP28-207ENST00000538475 BTBD17A6NE02 478 aa6.03□□□□□ -1.44
USP28-207ENST00000538475 B4DEV8 164 aa6.03□□□□□ -1.44
USP28-207ENST00000538475 M0QZK8 103 aa6.03□□□□□ -1.44
USP28-207ENST00000538475 DVL1O14640 695 aa6.03□□□□□ -1.44
USP28-207ENST00000538475 TCAPO15273 167 aa6.03□□□□□ -1.44
USP28-207ENST00000538475 GGCTO75223 188 aaKnown RBP6.03□□□□□ -1.44
USP28-207ENST00000538475 SNRNP200O75643 2136 aaKnown RBP6.03□□□□□ -1.44
USP28-207ENST00000538475 THY1P04216 161 aa6.03□□□□□ -1.44
USP28-207ENST00000538475 AMY2AP04746 511 aa6.03□□□□□ -1.44
USP28-207ENST00000538475 SEC11BP0C7V7 166 aa6.03□□□□□ -1.44
USP28-207ENST00000538475 TBC1D3HP0C7X1 549 aa6.03□□□□□ -1.44
USP28-207ENST00000538475 LAMP2P13473 410 aa6.03□□□□□ -1.44
USP28-207ENST00000538475 IL9P15248 144 aa6.03□□□□□ -1.44
USP28-207ENST00000538475 PGAM2P15259 253 aa6.03□□□□□ -1.44
USP28-207ENST00000538475 CSF2RAP15509 400 aa6.03□□□□□ -1.44
USP28-207ENST00000538475 MAKP20794 623 aa6.03□□□□□ -1.44
USP28-207ENST00000538475 SGSHP51688 502 aa6.03□□□□□ -1.44
USP28-207ENST00000538475 STXBP1P61764 594 aaKnown RBP6.03□□□□□ -1.44
USP28-207ENST00000538475 ADAM8P78325 824 aa6.03□□□□□ -1.44
USP28-207ENST00000538475 IL13RA1P78552 427 aa6.03□□□□□ -1.44
USP28-207ENST00000538475 HTRA4P83105 476 aaPredicted RBP6.03□□□□□ -1.44
USP28-207ENST00000538475 GAGE1Q13065 139 aa6.03□□□□□ -1.44
USP28-207ENST00000538475 KIAA0141Q14154 515 aaPredicted RBP6.03□□□□□ -1.44
USP28-207ENST00000538475 OR1Q1Q15612 314 aa6.03□□□□□ -1.44
USP28-207ENST00000538475 HAGHQ16775 308 aa6.03□□□□□ -1.44
USP28-207ENST00000538475 FAM180BQ6P0A1 224 aa6.03□□□□□ -1.44
USP28-207ENST00000538475 C22orf39Q6P5X5 142 aa6.03□□□□□ -1.44
USP28-207ENST00000538475 DHRS11Q6UWP2 260 aa6.03□□□□□ -1.44
USP28-207ENST00000538475 NPSR1Q6W5P4 371 aa6.03□□□□□ -1.44
USP28-207ENST00000538475 RPTNQ6XPR3 784 aa6.03□□□□□ -1.44
USP28-207ENST00000538475 FRRS1Q6ZNA5 592 aa6.03□□□□□ -1.44
USP28-207ENST00000538475 NUP54Q7Z3B4 507 aa6.03□□□□□ -1.44
USP28-207ENST00000538475 GRASPQ7Z6J2 395 aaPredicted RBP6.03□□□□□ -1.44
USP28-207ENST00000538475 AMZ2Q86W34 360 aa6.03□□□□□ -1.44
USP28-207ENST00000538475 TMPRSS12Q86WS5 348 aa6.03□□□□□ -1.44
USP28-207ENST00000538475 VRK2Q86Y07 508 aa6.03□□□□□ -1.44
USP28-207ENST00000538475 NRROSQ86YC3 692 aa6.03□□□□□ -1.44
USP28-207ENST00000538475 ZNF619Q8N2I2 560 aa6.03□□□□□ -1.44
USP28-207ENST00000538475 BPIFB2Q8N4F0 458 aa6.03□□□□□ -1.44
USP28-207ENST00000538475 C19orf47Q8N9M1 422 aaKnown RBP6.03□□□□□ -1.44
USP28-207ENST00000538475 ZNF383Q8NA42 475 aa6.03□□□□□ -1.44
USP28-207ENST00000538475 ACBD4Q8NC06 268 aa6.03□□□□□ -1.44
USP28-207ENST00000538475 OR13C5Q8NGS8 318 aa6.03□□□□□ -1.44
USP28-207ENST00000538475 OR10R2Q8NGX6 335 aa6.03□□□□□ -1.44
USP28-207ENST00000538475 TMED6Q8WW62 240 aa6.03□□□□□ -1.44
USP28-207ENST00000538475 OIT3Q8WWZ8 545 aa6.03□□□□□ -1.44
USP28-207ENST00000538475 ING5Q8WYH8 240 aa6.03□□□□□ -1.44
USP28-207ENST00000538475 OR8D1Q8WZ84 308 aa6.03□□□□□ -1.44
USP28-207ENST00000538475 DCUN1D4Q92564 292 aa6.03□□□□□ -1.44
USP28-207ENST00000538475 MCHR2Q969V1 340 aa6.03□□□□□ -1.44
USP28-207ENST00000538475 KTI12Q96EK9 354 aaPredicted RBP6.03□□□□□ -1.44
USP28-207ENST00000538475 C5orf34Q96MH7 638 aa6.03□□□□□ -1.44
USP28-207ENST00000538475 PTCHD1Q96NR3 888 aa6.03□□□□□ -1.44
USP28-207ENST00000538475 YPEL4Q96NS1 127 aa6.03□□□□□ -1.44
USP28-207ENST00000538475 GPX7Q96SL4 187 aaPredicted RBP6.03□□□□□ -1.44
USP28-207ENST00000538475 CDCA3Q99618 268 aaPredicted RBP6.03□□□□□ -1.44
USP28-207ENST00000538475 ADAT1Q9BUB4 502 aaKnown RBP6.03□□□□□ -1.44
USP28-207ENST00000538475 RNF126Q9BV68 326 aa6.03□□□□□ -1.44
USP28-207ENST00000538475 HCAR1Q9BXC0 346 aa6.03□□□□□ -1.44
USP28-207ENST00000538475 DPH1Q9BZG8 443 aa6.03□□□□□ -1.44
USP28-207ENST00000538475 CHST6Q9GZX3 395 aa6.03□□□□□ -1.44
USP28-207ENST00000538475 LAT2Q9GZY6 243 aa6.03□□□□□ -1.44
USP28-207ENST00000538475 ARV1Q9H2C2 271 aa6.03□□□□□ -1.44
USP28-207ENST00000538475 SMOC1Q9H4F8 434 aa6.03□□□□□ -1.44
USP28-207ENST00000538475 MED20Q9H944 212 aa6.03□□□□□ -1.44
USP28-207ENST00000538475 IL21RQ9HBE5 538 aa6.03□□□□□ -1.44
USP28-207ENST00000538475 LSM7Q9UK45 103 aaKnown RBP6.03□□□□□ -1.44
USP28-207ENST00000538475 GPR55Q9Y2T6 319 aaPredicted RBP6.03□□□□□ -1.44
USP28-207ENST00000538475 WDR45Q9Y484 360 aa6.03□□□□□ -1.44
USP28-207ENST00000538475 COL4A3Q01955 1670 aa6.03□□□□□ -1.44
USP28-207ENST00000538475 MYOFQ9NZM1 2061 aa6.03□□□□□ -1.44
USP28-207ENST00000538475 TCF20Q9UGU0 1960 aaKnown RBP6.02□□□□□ -1.45
USP28-207ENST00000538475 GOLGA4Q13439 2230 aaKnown RBP6.02□□□□□ -1.45
USP28-207ENST00000538475 TRBV23-1A0A0A0MS06 115 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 A0A1W2PPC1 479 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 A0A1W2PPE3 182 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 POM121BA6NF01 834 aa6.02□□□□□ -1.45
USP28-207ENST00000538475 ZNF587BE7ETH6 402 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms