RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 RPL7L1Q6DKI1 246 aaKnown RBP7.73□□□□□ -1.17
SRGAP1-202ENST00000537556 FAM71E1Q6IPT2 247 aa7.73□□□□□ -1.17
SRGAP1-202ENST00000537556 ZNF343Q6P1L6 599 aa7.73□□□□□ -1.17
SRGAP1-202ENST00000537556 BTNL3Q6UXE8 466 aa7.73□□□□□ -1.17
SRGAP1-202ENST00000537556 CD300LGQ6UXG3 332 aa7.73□□□□□ -1.17
SRGAP1-202ENST00000537556 TMPPEQ6ZT21 453 aa7.73□□□□□ -1.17
SRGAP1-202ENST00000537556 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.73□□□□□ -1.17
SRGAP1-202ENST00000537556 C1orf87Q8N0U7 546 aa7.73□□□□□ -1.17
SRGAP1-202ENST00000537556 KIR2DL5AQ8N109 375 aa7.73□□□□□ -1.17
SRGAP1-202ENST00000537556 LFNGQ8NES3 379 aa7.73□□□□□ -1.17
SRGAP1-202ENST00000537556 OR5P2Q8WZ92 322 aa7.73□□□□□ -1.17
SRGAP1-202ENST00000537556 SMARCD2Q92925 531 aa7.73□□□□□ -1.17
SRGAP1-202ENST00000537556 FBXO32Q969P5 355 aa7.73□□□□□ -1.17
SRGAP1-202ENST00000537556 PELI1Q96FA3 418 aa7.73□□□□□ -1.17
SRGAP1-202ENST00000537556 PRRT1Q99946 306 aa7.73□□□□□ -1.17
SRGAP1-202ENST00000537556 SYT3Q9BQG1 590 aa7.73□□□□□ -1.17
SRGAP1-202ENST00000537556 GPR174Q9BXC1 333 aa7.73□□□□□ -1.17
SRGAP1-202ENST00000537556 GOLGA2P5Q9HBQ8 144 aa7.73□□□□□ -1.17
SRGAP1-202ENST00000537556 NEUROD4Q9HD90 331 aa7.73□□□□□ -1.17
SRGAP1-202ENST00000537556 HAO2Q9NYQ3 351 aa7.73□□□□□ -1.17
SRGAP1-202ENST00000537556 TGIF2-C20orf24A0A0A6YYL0 155 aa7.72□□□□□ -1.17
SRGAP1-202ENST00000537556 MEIS3P1A6NDR6 274 aa7.72□□□□□ -1.17
SRGAP1-202ENST00000537556 DHRS7CA6NNS2 312 aa7.72□□□□□ -1.17
SRGAP1-202ENST00000537556 PIN1P1O15428 100 aa7.72□□□□□ -1.17
SRGAP1-202ENST00000537556 SRPX2O60687 465 aaPredicted RBP7.72□□□□□ -1.17
SRGAP1-202ENST00000537556 DUS4LO95620 317 aaKnown RBP7.72□□□□□ -1.17
SRGAP1-202ENST00000537556 TBX6O95947 436 aaPredicted RBP7.72□□□□□ -1.17
SRGAP1-202ENST00000537556 PGA3P0DJD8 388 aa7.72□□□□□ -1.17
SRGAP1-202ENST00000537556 KCNE1P15382 129 aa7.72□□□□□ -1.17
SRGAP1-202ENST00000537556 PCSK1P29120 753 aa7.72□□□□□ -1.17
SRGAP1-202ENST00000537556 CCKARP32238 428 aa7.72□□□□□ -1.17
SRGAP1-202ENST00000537556 GPR4P46093 362 aa7.72□□□□□ -1.17
SRGAP1-202ENST00000537556 TAS2R50P59544 299 aa7.72□□□□□ -1.17
SRGAP1-202ENST00000537556 ERVFRD-1P60508 538 aa7.72□□□□□ -1.17
SRGAP1-202ENST00000537556 ADAM8P78325 824 aa7.72□□□□□ -1.17
SRGAP1-202ENST00000537556 ZNF616Q08AN1 781 aa7.72□□□□□ -1.17
SRGAP1-202ENST00000537556 PPP1R1AQ13522 171 aa7.72□□□□□ -1.17
SRGAP1-202ENST00000537556 TNFAIP1Q13829 316 aa7.72□□□□□ -1.17
SRGAP1-202ENST00000537556 EBPQ15125 230 aaKnown RBP7.72□□□□□ -1.17
SRGAP1-202ENST00000537556 PIP5KL1Q5T9C9 394 aa7.72□□□□□ -1.17
SRGAP1-202ENST00000537556 YOD1Q5VVQ6 348 aaPredicted RBP7.72□□□□□ -1.17
SRGAP1-202ENST00000537556 RNF219Q5W0B1 726 aaPredicted RBP7.72□□□□□ -1.17
SRGAP1-202ENST00000537556 FAM151BQ6UXP7 276 aa7.72□□□□□ -1.17
SRGAP1-202ENST00000537556 COMMD6Q7Z4G1 85 aa7.72□□□□□ -1.17
SRGAP1-202ENST00000537556 FAM185AQ8N0U4 392 aa7.72□□□□□ -1.17
SRGAP1-202ENST00000537556 C11orf42Q8N5U0 333 aa7.72□□□□□ -1.17
SRGAP1-202ENST00000537556 ZDHHC22Q8N966 263 aa7.72□□□□□ -1.17
SRGAP1-202ENST00000537556 OR5AK2Q8NH90 309 aa7.72□□□□□ -1.17
SRGAP1-202ENST00000537556 GPX8Q8TED1 209 aa7.72□□□□□ -1.17
SRGAP1-202ENST00000537556 METTL21AQ8WXB1 218 aa7.72□□□□□ -1.17
SRGAP1-202ENST00000537556 TMEM18Q96B42 140 aa7.72□□□□□ -1.17
SRGAP1-202ENST00000537556 SEH1LQ96EE3 360 aa7.72□□□□□ -1.17
SRGAP1-202ENST00000537556 PDCD1LG2Q9BQ51 273 aa7.72□□□□□ -1.17
SRGAP1-202ENST00000537556 G6PC3Q9BUM1 346 aa7.72□□□□□ -1.17
SRGAP1-202ENST00000537556 SCRT1Q9BWW7 348 aa7.72□□□□□ -1.17
SRGAP1-202ENST00000537556 PDFQ9HBH1 243 aa7.72□□□□□ -1.17
SRGAP1-202ENST00000537556 MSL2Q9HCI7 577 aa7.72□□□□□ -1.17
SRGAP1-202ENST00000537556 ZNF107Q9UII5 783 aaPredicted RBP7.72□□□□□ -1.17
SRGAP1-202ENST00000537556 YBX2Q9Y2T7 364 aaKnown RBP7.72□□□□□ -1.17
SRGAP1-202ENST00000537556 ZNF281Q9Y2X9 895 aa7.72□□□□□ -1.17
SRGAP1-202ENST00000537556 MSGN1A6NI15 193 aa7.72□□□□□ -1.17
SRGAP1-202ENST00000537556 CBY3A6NI87 242 aa7.72□□□□□ -1.17
SRGAP1-202ENST00000537556 TMEM88BA6NKF7 163 aa7.72□□□□□ -1.17
SRGAP1-202ENST00000537556 ZNF727A8MUV8 499 aa7.72□□□□□ -1.17
SRGAP1-202ENST00000537556 SLC16A5O15375 505 aa7.72□□□□□ -1.17
SRGAP1-202ENST00000537556 CTAG2O75638 210 aa7.72□□□□□ -1.17
SRGAP1-202ENST00000537556 PNPP00491 289 aa7.72□□□□□ -1.17
SRGAP1-202ENST00000537556 TGFB1P01137 390 aa7.72□□□□□ -1.17
SRGAP1-202ENST00000537556 CSTBP04080 98 aaKnown RBP7.72□□□□□ -1.17
SRGAP1-202ENST00000537556 GAPDHP04406 335 aaKnown RBP7.72□□□□□ -1.17
SRGAP1-202ENST00000537556 PNLIPP16233 465 aa7.72□□□□□ -1.17
SRGAP1-202ENST00000537556 BCKDHBP21953 392 aa7.72□□□□□ -1.17
SRGAP1-202ENST00000537556 ACRV1P26436 265 aa7.72□□□□□ -1.17
SRGAP1-202ENST00000537556 POLR2HP52434 150 aaKnown RBP7.72□□□□□ -1.17
SRGAP1-202ENST00000537556 MANFP55145 182 aaKnown RBP7.72□□□□□ -1.17
SRGAP1-202ENST00000537556 SLC37A1P57057 533 aa7.72□□□□□ -1.17
SRGAP1-202ENST00000537556 RPS13P62277 151 aaKnown RBP7.72□□□□□ -1.17
SRGAP1-202ENST00000537556 FAM189A2Q15884 450 aa7.72□□□□□ -1.17
SRGAP1-202ENST00000537556 AMZ1Q400G9 498 aa7.72□□□□□ -1.17
SRGAP1-202ENST00000537556 TEX38Q6PEX7 206 aa7.72□□□□□ -1.17
SRGAP1-202ENST00000537556 ARL14Q8N4G2 192 aa7.72□□□□□ -1.17
SRGAP1-202ENST00000537556 ASB11Q8WXH4 323 aa7.72□□□□□ -1.17
SRGAP1-202ENST00000537556 CCDC74BQ96LY2 380 aa7.72□□□□□ -1.17
SRGAP1-202ENST00000537556 JSRP1Q96MG2 331 aaPredicted RBP7.72□□□□□ -1.17
SRGAP1-202ENST00000537556 IL36AQ9UHA7 158 aa7.72□□□□□ -1.17
SRGAP1-202ENST00000537556 CRLS1Q9UJA2 301 aa7.72□□□□□ -1.17
SRGAP1-202ENST00000537556 YLPM1P49750 1951 aaKnown RBP7.72□□□□□ -1.17
SRGAP1-202ENST00000537556 A0A1B0GW64 132 aa7.71□□□□□ -1.17
SRGAP1-202ENST00000537556 ZNF736B4DX44 427 aaPredicted RBP7.71□□□□□ -1.17
SRGAP1-202ENST00000537556 TMEM238C9JI98 176 aa7.71□□□□□ -1.17
SRGAP1-202ENST00000537556 PPP5D1E7EU14 171 aa7.71□□□□□ -1.17
SRGAP1-202ENST00000537556 SCGNO76038 276 aa7.71□□□□□ -1.17
SRGAP1-202ENST00000537556 AHSA1O95433 338 aa7.71□□□□□ -1.17
SRGAP1-202ENST00000537556 RNF151Q2KHN1 245 aa7.71□□□□□ -1.17
SRGAP1-202ENST00000537556 C4orf17Q53FE4 359 aa7.71□□□□□ -1.17
SRGAP1-202ENST00000537556 FBXL22Q6P050 247 aa7.71□□□□□ -1.17
SRGAP1-202ENST00000537556 RPUSD3Q6P087 351 aaKnown RBP7.71□□□□□ -1.17
SRGAP1-202ENST00000537556 TMEM220Q6QAJ8 160 aa7.71□□□□□ -1.17
SRGAP1-202ENST00000537556 STAC2Q6ZMT1 411 aa7.71□□□□□ -1.17
SRGAP1-202ENST00000537556 MBOAT2Q6ZWT7 520 aa7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms