RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 RAB35Q15286 201 aa7.44□□□□□ -1.22
SFSWAP-202ENST00000535202 CARD17Q5XLA6 110 aa7.44□□□□□ -1.22
SFSWAP-202ENST00000535202 ANKRD16Q6P6B7 361 aa7.44□□□□□ -1.22
SFSWAP-202ENST00000535202 CLEC2AQ6UVW9 174 aa7.44□□□□□ -1.22
SFSWAP-202ENST00000535202 DNM1P46Q6ZS02 220 aa7.44□□□□□ -1.22
SFSWAP-202ENST00000535202 H1FNTQ75WM6 255 aaPredicted RBP7.44□□□□□ -1.22
SFSWAP-202ENST00000535202 PTOV1Q86YD1 416 aa7.44□□□□□ -1.22
SFSWAP-202ENST00000535202 ZDHHC13Q8IUH4 622 aa7.44□□□□□ -1.22
SFSWAP-202ENST00000535202 UEVLDQ8IX04 471 aa7.44□□□□□ -1.22
SFSWAP-202ENST00000535202 RDH10Q8IZV5 341 aa7.44□□□□□ -1.22
SFSWAP-202ENST00000535202 GPR137CQ8N3F9 429 aa7.44□□□□□ -1.22
SFSWAP-202ENST00000535202 DPP10Q8N608 796 aa7.44□□□□□ -1.22
SFSWAP-202ENST00000535202 C10orf53Q8N6V4 93 aa7.44□□□□□ -1.22
SFSWAP-202ENST00000535202 DEDD2Q8WXF8 326 aa7.44□□□□□ -1.22
SFSWAP-202ENST00000535202 SGCDQ92629 289 aa7.44□□□□□ -1.22
SFSWAP-202ENST00000535202 BCL2L2Q92843 193 aaPredicted RBP7.44□□□□□ -1.22
SFSWAP-202ENST00000535202 FBXO17Q96EF6 278 aa7.44□□□□□ -1.22
SFSWAP-202ENST00000535202 SLC38A2Q96QD8 506 aa7.44□□□□□ -1.22
SFSWAP-202ENST00000535202 CITED4Q96RK1 184 aa7.44□□□□□ -1.22
SFSWAP-202ENST00000535202 MCHR1Q99705 422 aa7.44□□□□□ -1.22
SFSWAP-202ENST00000535202 ARHGDIGQ99819 225 aa7.44□□□□□ -1.22
SFSWAP-202ENST00000535202 RHNO1Q9BSD3 238 aa7.44□□□□□ -1.22
SFSWAP-202ENST00000535202 ASPNQ9BXN1 380 aa7.44□□□□□ -1.22
SFSWAP-202ENST00000535202 DGCR6LQ9BY27 220 aa7.44□□□□□ -1.22
SFSWAP-202ENST00000535202 SLC22A4Q9H015 551 aa7.44□□□□□ -1.22
SFSWAP-202ENST00000535202 NELFAQ9H3P2 528 aa7.44□□□□□ -1.22
SFSWAP-202ENST00000535202 EVA1AQ9H8M9 152 aa7.44□□□□□ -1.22
SFSWAP-202ENST00000535202 DNAJB9Q9UBS3 223 aa7.44□□□□□ -1.22
SFSWAP-202ENST00000535202 NAV3Q8IVL0 2385 aa7.44□□□□□ -1.22
SFSWAP-202ENST00000535202 A0A1W2PRG6 482 aa7.43□□□□□ -1.22
SFSWAP-202ENST00000535202 SLC35F4A4IF30 521 aa7.43□□□□□ -1.22
SFSWAP-202ENST00000535202 EFCAB10A6NFE3 127 aa7.43□□□□□ -1.22
SFSWAP-202ENST00000535202 CPSF4LA6NMK7 179 aaKnown RBP7.43□□□□□ -1.22
SFSWAP-202ENST00000535202 LRRN3E7EW58 273 aa7.43□□□□□ -1.22
SFSWAP-202ENST00000535202 RPL36A-HNRNPH2H7BZ11 118 aa7.43□□□□□ -1.22
SFSWAP-202ENST00000535202 H7C417 338 aa7.43□□□□□ -1.22
SFSWAP-202ENST00000535202 TPST2O60704 377 aa7.43□□□□□ -1.22
SFSWAP-202ENST00000535202 ZNF432O94892 652 aa7.43□□□□□ -1.22
SFSWAP-202ENST00000535202 CLIC3O95833 236 aa7.43□□□□□ -1.22
SFSWAP-202ENST00000535202 CRYAAP02489 173 aa7.43□□□□□ -1.22
SFSWAP-202ENST00000535202 BGLAPP02818 100 aa7.43□□□□□ -1.22
SFSWAP-202ENST00000535202 CELA3BP08861 270 aa7.43□□□□□ -1.22
SFSWAP-202ENST00000535202 CECR9P0C854 216 aa7.43□□□□□ -1.22
SFSWAP-202ENST00000535202 HLA-DOBP13765 273 aa7.43□□□□□ -1.22
SFSWAP-202ENST00000535202 SOX6P35712 828 aa7.43□□□□□ -1.22
SFSWAP-202ENST00000535202 TGFBR2P37173 567 aa7.43□□□□□ -1.22
SFSWAP-202ENST00000535202 CAPZA2P47755 286 aa7.43□□□□□ -1.22
SFSWAP-202ENST00000535202 CDH12P55289 794 aa7.43□□□□□ -1.22
SFSWAP-202ENST00000535202 PCBP3P57721 371 aaKnown RBP7.43□□□□□ -1.22
SFSWAP-202ENST00000535202 ARF1P84077 181 aaKnown RBP7.43□□□□□ -1.22
SFSWAP-202ENST00000535202 NAAAQ02083 359 aa7.43□□□□□ -1.22
SFSWAP-202ENST00000535202 POU3F1Q03052 451 aaPredicted RBP7.43□□□□□ -1.22
SFSWAP-202ENST00000535202 CD47Q08722 323 aa7.43□□□□□ -1.22
SFSWAP-202ENST00000535202 RBBP4Q09028 425 aa7.43□□□□□ -1.22
SFSWAP-202ENST00000535202 NPRL3Q12980 569 aa7.43□□□□□ -1.22
SFSWAP-202ENST00000535202 GALEQ14376 348 aa7.43□□□□□ -1.22
SFSWAP-202ENST00000535202 CEACAM16Q2WEN9 425 aa7.43□□□□□ -1.22
SFSWAP-202ENST00000535202 FAM98BQ52LJ0 330 aaKnown RBP7.43□□□□□ -1.22
SFSWAP-202ENST00000535202 Q5BKY6 102 aa7.43□□□□□ -1.22
SFSWAP-202ENST00000535202 ARMCX4Q5H9R4 360 aa7.43□□□□□ -1.22
SFSWAP-202ENST00000535202 PHYHD1Q5SRE7 291 aa7.43□□□□□ -1.22
SFSWAP-202ENST00000535202 TMEM236Q5W0B7 351 aa7.43□□□□□ -1.22
SFSWAP-202ENST00000535202 VHLLQ6RSH7 139 aa7.43□□□□□ -1.22
SFSWAP-202ENST00000535202 ZBTB46Q86UZ6 589 aa7.43□□□□□ -1.22
SFSWAP-202ENST00000535202 PRIMA1Q86XR5 153 aa7.43□□□□□ -1.22
SFSWAP-202ENST00000535202 SNX29P2Q8IUI4 249 aa7.43□□□□□ -1.22
SFSWAP-202ENST00000535202 ZNF525Q8N782 197 aa7.43□□□□□ -1.22
SFSWAP-202ENST00000535202 CELF2-AS1Q8N7Q2 184 aa7.43□□□□□ -1.22
SFSWAP-202ENST00000535202 ADPRHL1Q8NDY3 354 aa7.43□□□□□ -1.22
SFSWAP-202ENST00000535202 GPR32P1Q8NGA4 272 aa7.43□□□□□ -1.22
SFSWAP-202ENST00000535202 OR10A6Q8NH74 314 aa7.43□□□□□ -1.22
SFSWAP-202ENST00000535202 VANGL1Q8TAA9 524 aaPredicted RBP7.43□□□□□ -1.22
SFSWAP-202ENST00000535202 ENKURQ8TC29 256 aa7.43□□□□□ -1.22
SFSWAP-202ENST00000535202 BOD1Q96IK1 185 aa7.43□□□□□ -1.22
SFSWAP-202ENST00000535202 HYLS1Q96M11 299 aa7.43□□□□□ -1.22
SFSWAP-202ENST00000535202 NSMCE2Q96MF7 247 aa7.43□□□□□ -1.22
SFSWAP-202ENST00000535202 WDFY2Q96P53 400 aa7.43□□□□□ -1.22
SFSWAP-202ENST00000535202 MOGAT1Q96PD6 335 aa7.43□□□□□ -1.22
SFSWAP-202ENST00000535202 OR2M2Q96R28 347 aa7.43□□□□□ -1.22
SFSWAP-202ENST00000535202 MBOAT4Q96T53 435 aa7.43□□□□□ -1.22
SFSWAP-202ENST00000535202 EMC6Q9BV81 110 aa7.43□□□□□ -1.22
SFSWAP-202ENST00000535202 KATNB1Q9BVA0 655 aa7.43□□□□□ -1.22
SFSWAP-202ENST00000535202 TOR3AQ9H497 397 aa7.43□□□□□ -1.22
SFSWAP-202ENST00000535202 SEC61A2Q9H9S3 476 aa7.43□□□□□ -1.22
SFSWAP-202ENST00000535202 NTN4Q9HB63 628 aa7.43□□□□□ -1.22
SFSWAP-202ENST00000535202 CRLF2Q9HC73 371 aa7.43□□□□□ -1.22
SFSWAP-202ENST00000535202 GPR35Q9HC97 309 aa7.43□□□□□ -1.22
SFSWAP-202ENST00000535202 YAE1D1Q9NRH1 226 aa7.43□□□□□ -1.22
SFSWAP-202ENST00000535202 ELF5Q9UKW6 265 aaPredicted RBP7.43□□□□□ -1.22
SFSWAP-202ENST00000535202 DIMT1Q9UNQ2 313 aaKnown RBP7.43□□□□□ -1.22
SFSWAP-202ENST00000535202 ORC6Q9Y5N6 252 aa7.43□□□□□ -1.22
SFSWAP-202ENST00000535202 FKBP7Q9Y680 259 aa7.43□□□□□ -1.22
SFSWAP-202ENST00000535202 CHD3Q12873 2000 aaKnown RBP7.43□□□□□ -1.22
SFSWAP-202ENST00000535202 PLCE1Q9P212 2302 aa7.43□□□□□ -1.22
SFSWAP-202ENST00000535202 LOC100130705A0A1B0GUX0 176 aa7.42□□□□□ -1.22
SFSWAP-202ENST00000535202 LINC00854A0A1B0GVQ3 168 aa7.42□□□□□ -1.22
SFSWAP-202ENST00000535202 CCDC182A6NF36 153 aa7.42□□□□□ -1.22
SFSWAP-202ENST00000535202 KIAA1324LA8MWY0 1029 aaPredicted RBP7.42□□□□□ -1.22
SFSWAP-202ENST00000535202 C11orf98E9PRG8 122 aa7.42□□□□□ -1.22
SFSWAP-202ENST00000535202 MS4A18H0YCH9 400 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms