RNA–Protein interactions for RNA: ENST00000534663.1

RAG1-203, Transcript of recombination activating 1, humanhuman

TSL 1 (best)

Gene RAG1, Length 3,707 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAG1-203ENST00000534663 NAXDQ8IW45 347 aa6.17□□□□□ -1.42
RAG1-203ENST00000534663 ZNF615Q8N8J6 731 aa6.17□□□□□ -1.42
RAG1-203ENST00000534663 OR13C9Q8NGT0 318 aa6.17□□□□□ -1.42
RAG1-203ENST00000534663 SEH1LQ96EE3 360 aa6.17□□□□□ -1.42
RAG1-203ENST00000534663 BMFQ96LC9 184 aa6.17□□□□□ -1.42
RAG1-203ENST00000534663 C12orf57Q99622 126 aa6.17□□□□□ -1.42
RAG1-203ENST00000534663 PHB2Q99623 299 aa6.17□□□□□ -1.42
RAG1-203ENST00000534663 CST11Q9H112 138 aa6.17□□□□□ -1.42
RAG1-203ENST00000534663 DNTTIP1Q9H147 329 aa6.17□□□□□ -1.42
RAG1-203ENST00000534663 ZCCHC4Q9H5U6 513 aa6.17□□□□□ -1.42
RAG1-203ENST00000534663 EXOSC3Q9NQT5 275 aaKnown RBP6.17□□□□□ -1.42
RAG1-203ENST00000534663 IGKV1D-42A0A075B6H8 117 aa6.17□□□□□ -1.42
RAG1-203ENST00000534663 H3BML4 177 aa6.17□□□□□ -1.42
RAG1-203ENST00000534663 ZNF749O43361 778 aa6.17□□□□□ -1.42
RAG1-203ENST00000534663 STK17BO94768 372 aa6.17□□□□□ -1.42
RAG1-203ENST00000534663 ZNF432O94892 652 aa6.17□□□□□ -1.42
RAG1-203ENST00000534663 UTS2O95399 124 aa6.17□□□□□ -1.42
RAG1-203ENST00000534663 PNMTP11086 282 aa6.17□□□□□ -1.42
RAG1-203ENST00000534663 HNRNPA2B1P22626 353 aaKnown RBP6.17□□□□□ -1.42
RAG1-203ENST00000534663 HRH1P35367 487 aa6.17□□□□□ -1.42
RAG1-203ENST00000534663 NPY4RP50391 375 aa6.17□□□□□ -1.42
RAG1-203ENST00000534663 FMODQ06828 376 aa6.17□□□□□ -1.42
RAG1-203ENST00000534663 GGTLC2Q14390 218 aa6.17□□□□□ -1.42
RAG1-203ENST00000534663 TMEM225Q6GV28 225 aa6.17□□□□□ -1.42
RAG1-203ENST00000534663 FAM109BQ6ICB4 259 aaPredicted RBP6.17□□□□□ -1.42
RAG1-203ENST00000534663 C11orf87Q6NUJ2 197 aa6.17□□□□□ -1.42
RAG1-203ENST00000534663 ZNF585AQ6P3V2 769 aa6.17□□□□□ -1.42
RAG1-203ENST00000534663 FJX1Q86VR8 437 aa6.17□□□□□ -1.42
RAG1-203ENST00000534663 ZSCAN1Q8NBB4 408 aa6.17□□□□□ -1.42
RAG1-203ENST00000534663 CLEC1AQ8NC01 280 aa6.17□□□□□ -1.42
RAG1-203ENST00000534663 OR5D18Q8NGL1 313 aa6.17□□□□□ -1.42
RAG1-203ENST00000534663 OR6K3Q8NGY3 331 aa6.17□□□□□ -1.42
RAG1-203ENST00000534663 ELP5Q8TE02 316 aa6.17□□□□□ -1.42
RAG1-203ENST00000534663 MAFIPQ8WZ33 124 aa6.17□□□□□ -1.42
RAG1-203ENST00000534663 FGGYQ96C11 551 aa6.17□□□□□ -1.42
RAG1-203ENST00000534663 FOXRED1Q96CU9 486 aaPredicted RBP6.17□□□□□ -1.42
RAG1-203ENST00000534663 TM4SF19Q96DZ7 209 aa6.17□□□□□ -1.42
RAG1-203ENST00000534663 EMC6Q9BV81 110 aa6.17□□□□□ -1.42
RAG1-203ENST00000534663 TMPRSS13Q9BYE2 586 aa6.17□□□□□ -1.42
RAG1-203ENST00000534663 SMIM3Q9BZL3 60 aa6.17□□□□□ -1.42
RAG1-203ENST00000534663 GAREM1Q9H706 876 aa6.17□□□□□ -1.42
RAG1-203ENST00000534663 ACKR4Q9NPB9 350 aa6.17□□□□□ -1.42
RAG1-203ENST00000534663 DHCR7Q9UBM7 475 aaKnown RBP6.17□□□□□ -1.42
RAG1-203ENST00000534663 VDAC3Q9Y277 283 aa6.17□□□□□ -1.42
RAG1-203ENST00000534663 CSAG2Q9Y5P2 127 aa6.17□□□□□ -1.42
RAG1-203ENST00000534663 MRPS18BQ9Y676 258 aaKnown RBP6.17□□□□□ -1.42
RAG1-203ENST00000534663 TMEM200CA6NKL6 621 aa6.16□□□□□ -1.42
RAG1-203ENST00000534663 METTL12A8MUP2 240 aa6.16□□□□□ -1.42
RAG1-203ENST00000534663 SLC17A2O00624 439 aa6.16□□□□□ -1.42
RAG1-203ENST00000534663 PLRG1O43660 514 aaKnown RBP6.16□□□□□ -1.42
RAG1-203ENST00000534663 ZNF254O75437 659 aa6.16□□□□□ -1.42
RAG1-203ENST00000534663 MPIG6BO95866 241 aa6.16□□□□□ -1.42
RAG1-203ENST00000534663 KNG1P01042 644 aa6.16□□□□□ -1.42
RAG1-203ENST00000534663 TNFP01375 233 aa6.16□□□□□ -1.42
RAG1-203ENST00000534663 SMIM10L1P0DMW3 83 aa6.16□□□□□ -1.42
RAG1-203ENST00000534663 CTLA4P16410 223 aa6.16□□□□□ -1.42
RAG1-203ENST00000534663 SCRN3Q0VDG4 424 aa6.16□□□□□ -1.42
RAG1-203ENST00000534663 SLC17A1Q14916 467 aa6.16□□□□□ -1.42
RAG1-203ENST00000534663 NKAPLQ5M9Q1 402 aa6.16□□□□□ -1.42
RAG1-203ENST00000534663 LCN10Q6JVE6 187 aa6.16□□□□□ -1.42
RAG1-203ENST00000534663 TFAP2EQ6VUC0 442 aa6.16□□□□□ -1.42
RAG1-203ENST00000534663 OR10H5Q8NGA6 315 aa6.16□□□□□ -1.42
RAG1-203ENST00000534663 MARCH1Q8TCQ1 289 aa6.16□□□□□ -1.42
RAG1-203ENST00000534663 TSLPQ969D9 159 aa6.16□□□□□ -1.42
RAG1-203ENST00000534663 SMIM10Q96HG1 83 aa6.16□□□□□ -1.42
RAG1-203ENST00000534663 LCORQ96JN0 433 aaPredicted RBP6.16□□□□□ -1.42
RAG1-203ENST00000534663 CMTM3Q96MX0 182 aa6.16□□□□□ -1.42
RAG1-203ENST00000534663 ZNF426Q9BUY5 554 aa6.16□□□□□ -1.42
RAG1-203ENST00000534663 SLC25A32Q9H2D1 315 aa6.16□□□□□ -1.42
RAG1-203ENST00000534663 CHMP1AQ9HD42 196 aaPredicted RBP6.16□□□□□ -1.42
RAG1-203ENST00000534663 EDARQ9UNE0 448 aa6.16□□□□□ -1.42
RAG1-203ENST00000534663 LHX6Q9UPM6 363 aa6.16□□□□□ -1.42
RAG1-203ENST00000534663 TICRRQ7Z2Z1 1910 aa6.16□□□□□ -1.42
RAG1-203ENST00000534663 TRAV14DV4A0A0A6YYC5 116 aa6.16□□□□□ -1.42
RAG1-203ENST00000534663 LOC107986453A0A1B0GWG9 222 aa6.16□□□□□ -1.42
RAG1-203ENST00000534663 DNASE2O00115 360 aaPredicted RBP6.16□□□□□ -1.42
RAG1-203ENST00000534663 ICOSLGO75144 302 aa6.16□□□□□ -1.42
RAG1-203ENST00000534663 SCGB1D2O95969 90 aa6.16□□□□□ -1.42
RAG1-203ENST00000534663 S100A6P06703 90 aa6.16□□□□□ -1.42
RAG1-203ENST00000534663 HOXB5P09067 269 aa6.16□□□□□ -1.42
RAG1-203ENST00000534663 H2BFMP0C1H6 154 aa6.16□□□□□ -1.42
RAG1-203ENST00000534663 LINC00271P0C7V0 271 aa6.16□□□□□ -1.42
RAG1-203ENST00000534663 GP1BBP13224 206 aa6.16□□□□□ -1.42
RAG1-203ENST00000534663 RPA2P15927 270 aa6.16□□□□□ -1.42
RAG1-203ENST00000534663 ITGA3P26006 1051 aa6.16□□□□□ -1.42
RAG1-203ENST00000534663 MST1P26927 711 aa6.16□□□□□ -1.42
RAG1-203ENST00000534663 MPGP29372 298 aa6.16□□□□□ -1.42
RAG1-203ENST00000534663 AKT2P31751 481 aa6.16□□□□□ -1.42
RAG1-203ENST00000534663 SWI5Q1ZZU3 235 aa6.16□□□□□ -1.42
RAG1-203ENST00000534663 PAN3Q58A45 887 aaKnown RBP6.16□□□□□ -1.42
RAG1-203ENST00000534663 EXOSC6Q5RKV6 272 aaKnown RBP6.16□□□□□ -1.42
RAG1-203ENST00000534663 C1orf189Q5VU69 101 aa6.16□□□□□ -1.42
RAG1-203ENST00000534663 AWAT2Q6E213 333 aa6.16□□□□□ -1.42
RAG1-203ENST00000534663 DCXRQ7Z4W1 244 aa6.16□□□□□ -1.42
RAG1-203ENST00000534663 BIVMQ86UB2 503 aa6.16□□□□□ -1.42
RAG1-203ENST00000534663 CDC20BQ86Y33 519 aa6.16□□□□□ -1.42
RAG1-203ENST00000534663 PUSL1Q8N0Z8 303 aaKnown RBP6.16□□□□□ -1.42
RAG1-203ENST00000534663 SVBPQ8N300 66 aa6.16□□□□□ -1.42
RAG1-203ENST00000534663 OTOSQ8NHW6 89 aa6.16□□□□□ -1.42
RAG1-203ENST00000534663 RLN3Q8WXF3 142 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms