RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 IFITM2Q01629 132 aa4.52□□□□□ -1.69
ECHDC1-222ENST00000531967 FZD5Q13467 585 aa4.52□□□□□ -1.69
ECHDC1-222ENST00000531967 LRRC36Q1X8D7 754 aa4.52□□□□□ -1.69
ECHDC1-222ENST00000531967 CYBRD1Q53TN4 286 aa4.52□□□□□ -1.69
ECHDC1-222ENST00000531967 TNFAIP8L3Q5GJ75 292 aa4.52□□□□□ -1.69
ECHDC1-222ENST00000531967 SLC7A13Q8TCU3 470 aa4.52□□□□□ -1.69
ECHDC1-222ENST00000531967 MRGPRDQ8TDS7 321 aa4.52□□□□□ -1.69
ECHDC1-222ENST00000531967 TMEM80Q96HE8 168 aa4.52□□□□□ -1.69
ECHDC1-222ENST00000531967 NUDT9Q9BW91 350 aa4.52□□□□□ -1.69
ECHDC1-222ENST00000531967 ALX4Q9H161 411 aaPredicted RBP4.52□□□□□ -1.69
ECHDC1-222ENST00000531967 OLFML3Q9NRN5 406 aa4.52□□□□□ -1.69
ECHDC1-222ENST00000531967 HRASLS2Q9NWW9 162 aa4.52□□□□□ -1.69
ECHDC1-222ENST00000531967 RAB26Q9ULW5 256 aa4.52□□□□□ -1.69
ECHDC1-222ENST00000531967 FARSAQ9Y285 508 aaKnown RBP4.52□□□□□ -1.69
ECHDC1-222ENST00000531967 NDUFAF1Q9Y375 327 aa4.52□□□□□ -1.69
ECHDC1-222ENST00000531967 PAM16Q9Y3D7 125 aa4.52□□□□□ -1.69
ECHDC1-222ENST00000531967 KIR2DS1A0A191URI9 304 aa4.51□□□□□ -1.69
ECHDC1-222ENST00000531967 PSMD12O00232 456 aaPredicted RBP4.51□□□□□ -1.69
ECHDC1-222ENST00000531967 SLC31A2O15432 143 aa4.51□□□□□ -1.69
ECHDC1-222ENST00000531967 TOM1O60784 492 aa4.51□□□□□ -1.69
ECHDC1-222ENST00000531967 NBEAP1P0C6P0 100 aa4.51□□□□□ -1.69
ECHDC1-222ENST00000531967 FUT3P21217 361 aa4.51□□□□□ -1.69
ECHDC1-222ENST00000531967 SSTR5P35346 364 aa4.51□□□□□ -1.69
ECHDC1-222ENST00000531967 MEOX2P50222 304 aa4.51□□□□□ -1.69
ECHDC1-222ENST00000531967 FGF8P55075 233 aaPredicted RBP4.51□□□□□ -1.69
ECHDC1-222ENST00000531967 OR10A3P58181 314 aa4.51□□□□□ -1.69
ECHDC1-222ENST00000531967 AP1S1P61966 158 aa4.51□□□□□ -1.69
ECHDC1-222ENST00000531967 RPL19P84098 196 aaKnown RBP4.51□□□□□ -1.69
ECHDC1-222ENST00000531967 ILF3Q12906 894 aaKnown RBP eCLIP4.51□□□□□ -1.692e-7■■■■□ 19.4
ECHDC1-222ENST00000531967 KIR2DS1Q14954 304 aa4.51□□□□□ -1.69
ECHDC1-222ENST00000531967 SPA17Q15506 151 aa4.51□□□□□ -1.69
ECHDC1-222ENST00000531967 FAHD2BQ6P2I3 314 aaPredicted RBP4.51□□□□□ -1.69
ECHDC1-222ENST00000531967 ATRAIDQ6UW56 229 aa4.51□□□□□ -1.69
ECHDC1-222ENST00000531967 PARM1Q6UWI2 310 aa4.51□□□□□ -1.69
ECHDC1-222ENST00000531967 ZNF730Q6ZMV8 503 aa4.51□□□□□ -1.69
ECHDC1-222ENST00000531967 NRMQ8IXM6 262 aa4.51□□□□□ -1.69
ECHDC1-222ENST00000531967 RNASE11Q8TAA1 199 aaKnown RBP4.51□□□□□ -1.69
ECHDC1-222ENST00000531967 GRPEL2Q8TAA5 225 aa4.51□□□□□ -1.69
ECHDC1-222ENST00000531967 OLIG1Q8TAK6 271 aa4.51□□□□□ -1.69
ECHDC1-222ENST00000531967 HPSE2Q8WWQ2 592 aa4.51□□□□□ -1.69
ECHDC1-222ENST00000531967 STMN2Q93045 179 aa4.51□□□□□ -1.69
ECHDC1-222ENST00000531967 RAB3CQ96E17 227 aa4.51□□□□□ -1.69
ECHDC1-222ENST00000531967 FAHD2AQ96GK7 314 aa4.51□□□□□ -1.69
ECHDC1-222ENST00000531967 Q96MT0 163 aa4.51□□□□□ -1.69
ECHDC1-222ENST00000531967 DDA1Q9BW61 102 aa4.51□□□□□ -1.69
ECHDC1-222ENST00000531967 ARL6Q9H0F7 186 aa4.51□□□□□ -1.69
ECHDC1-222ENST00000531967 NMUR1Q9HB89 426 aa4.51□□□□□ -1.69
ECHDC1-222ENST00000531967 MYOZ1Q9NP98 299 aaPredicted RBP4.51□□□□□ -1.69
ECHDC1-222ENST00000531967 RAI2Q9Y5P3 530 aa4.51□□□□□ -1.69
ECHDC1-222ENST00000531967 NALCNQ8IZF0 1738 aa4.51□□□□□ -1.69
ECHDC1-222ENST00000531967 A0A0B4J2E0 115 aa4.51□□□□□ -1.69
ECHDC1-222ENST00000531967 A0A1B0GU03 582 aa4.51□□□□□ -1.69
ECHDC1-222ENST00000531967 A0A1B0GX12 115 aa4.51□□□□□ -1.69
ECHDC1-222ENST00000531967 UNC119BA6NIH7 251 aa4.51□□□□□ -1.69
ECHDC1-222ENST00000531967 EI24O14681 340 aa4.51□□□□□ -1.69
ECHDC1-222ENST00000531967 CATP04040 527 aaKnown RBP4.51□□□□□ -1.69
ECHDC1-222ENST00000531967 SERPINB2P05120 415 aa4.51□□□□□ -1.69
ECHDC1-222ENST00000531967 KCNE1P15382 129 aa4.51□□□□□ -1.69
ECHDC1-222ENST00000531967 UGT2B7P16662 529 aa4.51□□□□□ -1.69
ECHDC1-222ENST00000531967 CHRNB2P17787 502 aa4.51□□□□□ -1.69
ECHDC1-222ENST00000531967 PRKXP51817 358 aa4.51□□□□□ -1.69
ECHDC1-222ENST00000531967 OR1D5P58170 312 aa4.51□□□□□ -1.69
ECHDC1-222ENST00000531967 PGGHGQ32M88 737 aa4.51□□□□□ -1.69
ECHDC1-222ENST00000531967 EIPR1Q53HC9 387 aa4.51□□□□□ -1.69
ECHDC1-222ENST00000531967 ACER2Q5QJU3 275 aa4.51□□□□□ -1.69
ECHDC1-222ENST00000531967 PWWP2BQ6NUJ5 590 aa4.51□□□□□ -1.69
ECHDC1-222ENST00000531967 CD200R1LQ6Q8B3 271 aa4.51□□□□□ -1.69
ECHDC1-222ENST00000531967 MRPL52Q86TS9 123 aaKnown RBP4.51□□□□□ -1.69
ECHDC1-222ENST00000531967 NPAS3Q8IXF0 933 aa4.51□□□□□ -1.69
ECHDC1-222ENST00000531967 C15orf54Q8N8G6 183 aa4.51□□□□□ -1.69
ECHDC1-222ENST00000531967 OR7A2PQ8NGA2 310 aa4.51□□□□□ -1.69
ECHDC1-222ENST00000531967 OR51D1Q8NGF3 324 aa4.51□□□□□ -1.69
ECHDC1-222ENST00000531967 TOMM40LQ969M1 308 aa4.51□□□□□ -1.69
ECHDC1-222ENST00000531967 NSL1Q96IY1 281 aa4.51□□□□□ -1.69
ECHDC1-222ENST00000531967 MS4A14Q96JA4 679 aa4.51□□□□□ -1.69
ECHDC1-222ENST00000531967 SDHCQ99643 169 aaPredicted RBP4.51□□□□□ -1.69
ECHDC1-222ENST00000531967 WDR77Q9BQA1 342 aaPredicted RBP4.51□□□□□ -1.69
ECHDC1-222ENST00000531967 CDCA4Q9BXL8 241 aa4.51□□□□□ -1.69
ECHDC1-222ENST00000531967 C11orf49Q9H6J7 331 aa4.51□□□□□ -1.69
ECHDC1-222ENST00000531967 ZNF430Q9H8G1 570 aaPredicted RBP4.51□□□□□ -1.69
ECHDC1-222ENST00000531967 RHOFQ9HBH0 211 aa4.51□□□□□ -1.69
ECHDC1-222ENST00000531967 GALPQ9UBC7 116 aa4.51□□□□□ -1.69
ECHDC1-222ENST00000531967 PPP2R2CQ9Y2T4 447 aa4.51□□□□□ -1.69
ECHDC1-222ENST00000531967 FLT4P35916 1363 aa4.5□□□□□ -1.69
ECHDC1-222ENST00000531967 TOPAZ1Q8N9V7 1692 aa4.5□□□□□ -1.69
ECHDC1-222ENST00000531967 MYH8P13535 1937 aa4.5□□□□□ -1.69
ECHDC1-222ENST00000531967 RGPD1P0DJD0 1748 aa4.5□□□□□ -1.69
ECHDC1-222ENST00000531967 CXCR6O00574 342 aa4.5□□□□□ -1.69
ECHDC1-222ENST00000531967 KLRC4O43908 158 aa4.5□□□□□ -1.69
ECHDC1-222ENST00000531967 CXCL13O43927 109 aa4.5□□□□□ -1.69
ECHDC1-222ENST00000531967 EIF1BO60739 113 aaKnown RBP4.5□□□□□ -1.69
ECHDC1-222ENST00000531967 HPP00738 406 aa4.5□□□□□ -1.69
ECHDC1-222ENST00000531967 JCHAINP01591 159 aa4.5□□□□□ -1.69
ECHDC1-222ENST00000531967 HBE1P02100 147 aa4.5□□□□□ -1.69
ECHDC1-222ENST00000531967 C2P06681 752 aa4.5□□□□□ -1.69
ECHDC1-222ENST00000531967 ZDHHC11BP0C7U3 371 aa4.5□□□□□ -1.69
ECHDC1-222ENST00000531967 RPL4P36578 427 aaKnown RBP4.5□□□□□ -1.69
ECHDC1-222ENST00000531967 DCTP40126 519 aa4.5□□□□□ -1.69
ECHDC1-222ENST00000531967 FOLR3P41439 243 aa4.5□□□□□ -1.69
ECHDC1-222ENST00000531967 EIF1P41567 113 aaKnown RBP4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms