RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 SNTNA6NMZ2 147 aa12.53□□□□□ -0.4
CPSF1-206ENST00000531480 PRR23D1E9PI22 279 aaPredicted RBP12.53□□□□□ -0.4
CPSF1-206ENST00000531480 HS3ST1O14792 307 aa12.53□□□□□ -0.4
CPSF1-206ENST00000531480 SLC16A6O15403 523 aa12.53□□□□□ -0.4
CPSF1-206ENST00000531480 PRKYO43930 277 aa12.53□□□□□ -0.4
CPSF1-206ENST00000531480 GLCEO94923 617 aa12.53□□□□□ -0.4
CPSF1-206ENST00000531480 PTHP01270 115 aa12.53□□□□□ -0.4
CPSF1-206ENST00000531480 CRYAAP02489 173 aa12.53□□□□□ -0.4
CPSF1-206ENST00000531480 PRR23D2P0DMB1 279 aaPredicted RBP12.53□□□□□ -0.4
CPSF1-206ENST00000531480 PAICSP22234 425 aaKnown RBP12.53□□□□□ -0.4
CPSF1-206ENST00000531480 PYCR1P32322 319 aa12.53□□□□□ -0.4
CPSF1-206ENST00000531480 CDC42P60953 191 aa12.53□□□□□ -0.4
CPSF1-206ENST00000531480 TEKQ02763 1124 aa12.53□□□□□ -0.4
CPSF1-206ENST00000531480 SCRN3Q0VDG4 424 aa12.53□□□□□ -0.4
CPSF1-206ENST00000531480 KEAP1Q14145 624 aa12.53□□□□□ -0.4
CPSF1-206ENST00000531480 SNAPC1Q16533 368 aa12.53□□□□□ -0.4
CPSF1-206ENST00000531480 MEP1BQ16820 701 aa12.53□□□□□ -0.4
CPSF1-206ENST00000531480 PABPC1L2AQ5JQF8 200 aa12.53□□□□□ -0.4
CPSF1-206ENST00000531480 SLC35D3Q5M8T2 416 aa12.53□□□□□ -0.4
CPSF1-206ENST00000531480 AADACL4Q5VUY2 407 aa12.53□□□□□ -0.4
CPSF1-206ENST00000531480 CPOQ8IVL8 374 aa12.53□□□□□ -0.4
CPSF1-206ENST00000531480 C8orf59Q8N0T1 100 aaPredicted RBP12.53□□□□□ -0.4
CPSF1-206ENST00000531480 ZNF611Q8N823 705 aa12.53□□□□□ -0.4
CPSF1-206ENST00000531480 NUP37Q8NFH4 326 aa12.53□□□□□ -0.4
CPSF1-206ENST00000531480 PROKR2Q8NFJ6 384 aa12.53□□□□□ -0.4
CPSF1-206ENST00000531480 TMEM163Q8TC26 289 aa12.53□□□□□ -0.4
CPSF1-206ENST00000531480 POM121L2Q96KW2 1035 aa12.53□□□□□ -0.4
CPSF1-206ENST00000531480 RERGLQ9H628 205 aa12.53□□□□□ -0.4
CPSF1-206ENST00000531480 MED20Q9H944 212 aa12.53□□□□□ -0.4
CPSF1-206ENST00000531480 CCNB1IP1Q9NPC3 277 aa12.53□□□□□ -0.4
CPSF1-206ENST00000531480 BLOC1S6Q9UL45 172 aa12.53□□□□□ -0.4
CPSF1-206ENST00000531480 NDRG4Q9ULP0 352 aaKnown RBP12.53□□□□□ -0.4
CPSF1-206ENST00000531480 COMMD3-BMI1R4GMX3 469 aa12.53□□□□□ -0.4
CPSF1-206ENST00000531480 DSCAMO60469 2012 aa12.53□□□□□ -0.4
CPSF1-206ENST00000531480 OR6C6A6NF89 314 aa12.52□□□□□ -0.41
CPSF1-206ENST00000531480 FAM171A2A8MVW0 826 aa12.52□□□□□ -0.41
CPSF1-206ENST00000531480 ATP6V1G2-DDX39BF2Z307 99 aa12.52□□□□□ -0.41
CPSF1-206ENST00000531480 SYNGR3O43761 229 aa12.52□□□□□ -0.41
CPSF1-206ENST00000531480 GYPBP06028 91 aa12.52□□□□□ -0.41
CPSF1-206ENST00000531480 FMO3P31513 532 aa12.52□□□□□ -0.41
CPSF1-206ENST00000531480 NKX6-1P78426 367 aaPredicted RBP12.52□□□□□ -0.41
CPSF1-206ENST00000531480 HGFACQ04756 655 aa12.52□□□□□ -0.41
CPSF1-206ENST00000531480 CCDC92Q53HC0 331 aaPredicted RBP12.52□□□□□ -0.41
CPSF1-206ENST00000531480 SLC25A30Q5SVS4 291 aa12.52□□□□□ -0.41
CPSF1-206ENST00000531480 SLC18B1Q6NT16 456 aa12.52□□□□□ -0.41
CPSF1-206ENST00000531480 PLBD1Q6P4A8 553 aa12.52□□□□□ -0.41
CPSF1-206ENST00000531480 B3GLCTQ6Y288 498 aa12.52□□□□□ -0.41
CPSF1-206ENST00000531480 C20orf204Q6ZNR8 217 aa12.52□□□□□ -0.41
CPSF1-206ENST00000531480 CXXC5Q7LFL8 322 aaKnown RBP12.52□□□□□ -0.41
CPSF1-206ENST00000531480 SLC30A7Q8NEW0 376 aa12.52□□□□□ -0.41
CPSF1-206ENST00000531480 OR4F15Q8NGB8 312 aa12.52□□□□□ -0.41
CPSF1-206ENST00000531480 OR51L1Q8NGJ5 315 aa12.52□□□□□ -0.41
CPSF1-206ENST00000531480 TRUB1Q8WWH5 349 aaKnown RBP12.52□□□□□ -0.41
CPSF1-206ENST00000531480 AKAP1Q92667 903 aaKnown RBP eCLIP12.52□□□□□ -0.41
CPSF1-206ENST00000531480 PLEKHA8Q96JA3 519 aa12.52□□□□□ -0.41
CPSF1-206ENST00000531480 Q96MT0 163 aa12.52□□□□□ -0.41
CPSF1-206ENST00000531480 ANKRD60Q9BZ19 345 aa12.52□□□□□ -0.41
CPSF1-206ENST00000531480 TOR3AQ9H497 397 aa12.52□□□□□ -0.41
CPSF1-206ENST00000531480 RIBC2Q9H4K1 309 aa12.52□□□□□ -0.41
CPSF1-206ENST00000531480 RNF121Q9H920 327 aa12.52□□□□□ -0.41
CPSF1-206ENST00000531480 FAM118AQ9NWS6 357 aa12.52□□□□□ -0.41
CPSF1-206ENST00000531480 IMPAD1Q9NX62 359 aa12.52□□□□□ -0.41
CPSF1-206ENST00000531480 ASH2LQ9UBL3 628 aa12.52□□□□□ -0.41
CPSF1-206ENST00000531480 GMPPBQ9Y5P6 360 aa12.52□□□□□ -0.41
CPSF1-206ENST00000531480 LOC100509620A0A075B734 347 aa12.51□□□□□ -0.41
CPSF1-206ENST00000531480 IQCMA0A1B0GVH7 501 aa12.51□□□□□ -0.41
CPSF1-206ENST00000531480 E7EQL1 145 aa12.51□□□□□ -0.41
CPSF1-206ENST00000531480 DANCRP0C864 163 aa12.51□□□□□ -0.41
CPSF1-206ENST00000531480 PSKH1P11801 424 aa12.51□□□□□ -0.41
CPSF1-206ENST00000531480 NR4A1P22736 598 aa12.51□□□□□ -0.41
CPSF1-206ENST00000531480 PCSK6P29122 969 aa12.51□□□□□ -0.41
CPSF1-206ENST00000531480 PLP2Q04941 152 aa12.51□□□□□ -0.41
CPSF1-206ENST00000531480 KRTAP27-1Q3LI81 207 aa12.51□□□□□ -0.41
CPSF1-206ENST00000531480 NXNL2Q5VZ03 156 aa12.51□□□□□ -0.41
CPSF1-206ENST00000531480 SLC22A25Q6T423 547 aa12.51□□□□□ -0.41
CPSF1-206ENST00000531480 LYPD4Q6UWN0 246 aa12.51□□□□□ -0.41
CPSF1-206ENST00000531480 PAMR1Q6UXH9 720 aa12.51□□□□□ -0.41
CPSF1-206ENST00000531480 VASH1Q7L8A9 365 aaPredicted RBP12.51□□□□□ -0.41
CPSF1-206ENST00000531480 THAP5Q7Z6K1 395 aa12.51□□□□□ -0.41
CPSF1-206ENST00000531480 TIGD4Q8IY51 512 aa12.51□□□□□ -0.41
CPSF1-206ENST00000531480 ALDH16A1Q8IZ83 802 aa12.51□□□□□ -0.41
CPSF1-206ENST00000531480 PIAS4Q8N2W9 510 aaPredicted RBP12.51□□□□□ -0.41
CPSF1-206ENST00000531480 ZNF511Q8NB15 262 aa12.51□□□□□ -0.41
CPSF1-206ENST00000531480 BBS1Q8NFJ9 593 aa12.51□□□□□ -0.41
CPSF1-206ENST00000531480 GJC3Q8NFK1 279 aa12.51□□□□□ -0.41
CPSF1-206ENST00000531480 OR8J1Q8NGP2 316 aa12.51□□□□□ -0.41
CPSF1-206ENST00000531480 AKR7LQ8NHP1 331 aa12.51□□□□□ -0.41
CPSF1-206ENST00000531480 NEUROG1Q92886 237 aa12.51□□□□□ -0.41
CPSF1-206ENST00000531480 FBXW5Q969U6 566 aa12.51□□□□□ -0.41
CPSF1-206ENST00000531480 WDR76Q9H967 626 aa12.51□□□□□ -0.41
CPSF1-206ENST00000531480 PNRC2Q9NPJ4 139 aaKnown RBP12.51□□□□□ -0.41
CPSF1-206ENST00000531480 CCDC182A6NF36 153 aa12.5□□□□□ -0.41
CPSF1-206ENST00000531480 RER1O15258 196 aa12.5□□□□□ -0.41
CPSF1-206ENST00000531480 SGCEO43556 437 aa12.5□□□□□ -0.41
CPSF1-206ENST00000531480 TLX2O43763 284 aaPredicted RBP12.5□□□□□ -0.41
CPSF1-206ENST00000531480 TMCC2O75069 709 aa12.5□□□□□ -0.41
CPSF1-206ENST00000531480 MYF6P23409 242 aa12.5□□□□□ -0.41
CPSF1-206ENST00000531480 STOMP27105 288 aa12.5□□□□□ -0.41
CPSF1-206ENST00000531480 APEX1P27695 318 aaKnown RBP12.5□□□□□ -0.41
CPSF1-206ENST00000531480 ENTPD1P49961 510 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms