RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 CDH10Q9Y6N8 788 aa22.59■■□□□ 1.21
TSPAN4-217ENST00000527644 INAFM1C9JVW0 142 aa22.58■■□□□ 1.21
TSPAN4-217ENST00000527644 TLX2O43763 284 aaPredicted RBP22.58■■□□□ 1.21
TSPAN4-217ENST00000527644 MPZL1O95297 269 aa22.58■■□□□ 1.21
TSPAN4-217ENST00000527644 MICAQ29983 383 aa22.58■■□□□ 1.21
TSPAN4-217ENST00000527644 PGM2L1Q6PCE3 622 aa22.58■■□□□ 1.21
TSPAN4-217ENST00000527644 ARL9Q6T311 187 aa22.58■■□□□ 1.21
TSPAN4-217ENST00000527644 OR52L1Q8NGH7 329 aa22.58■■□□□ 1.21
TSPAN4-217ENST00000527644 TSSK2Q96PF2 358 aa22.58■■□□□ 1.21
TSPAN4-217ENST00000527644 ELOVL3Q9HB03 270 aa22.58■■□□□ 1.21
TSPAN4-217ENST00000527644 IL20Q9NYY1 176 aa22.58■■□□□ 1.21
TSPAN4-217ENST00000527644 B9D1Q9UPM9 204 aa22.58■■□□□ 1.21
TSPAN4-217ENST00000527644 CHD3Q12873 2000 aaKnown RBP22.57■■□□□ 1.2
TSPAN4-217ENST00000527644 SGCEO43556 437 aa22.57■■□□□ 1.2
TSPAN4-217ENST00000527644 DOK2O60496 412 aa22.57■■□□□ 1.2
TSPAN4-217ENST00000527644 NAT2P11245 290 aa22.57■■□□□ 1.2
TSPAN4-217ENST00000527644 HOXB6P17509 224 aaKnown RBP22.57■■□□□ 1.2
TSPAN4-217ENST00000527644 GIFP27352 417 aa22.57■■□□□ 1.2
TSPAN4-217ENST00000527644 PPP1R8Q12972 351 aaKnown RBP22.57■■□□□ 1.2
TSPAN4-217ENST00000527644 GK3PQ14409 553 aa22.57■■□□□ 1.2
TSPAN4-217ENST00000527644 KRTAP21-3Q3LHN1 58 aa22.57■■□□□ 1.2
TSPAN4-217ENST00000527644 ZNF718Q3SXZ3 478 aa22.57■■□□□ 1.2
TSPAN4-217ENST00000527644 RASSF6Q6ZTQ3 369 aa22.57■■□□□ 1.2
TSPAN4-217ENST00000527644 ADGRG5Q8IZF4 528 aa22.57■■□□□ 1.2
TSPAN4-217ENST00000527644 OR6V1Q8N148 313 aa22.57■■□□□ 1.2
TSPAN4-217ENST00000527644 AQP11Q8NBQ7 271 aa22.57■■□□□ 1.2
TSPAN4-217ENST00000527644 SLC7A6OSQ96CW6 309 aaPredicted RBP22.57■■□□□ 1.2
TSPAN4-217ENST00000527644 C4orf45Q96LM5 186 aa22.57■■□□□ 1.2
TSPAN4-217ENST00000527644 CHID1Q9BWS9 393 aa22.57■■□□□ 1.2
TSPAN4-217ENST00000527644 EGLN3Q9H6Z9 239 aa22.57■■□□□ 1.2
TSPAN4-217ENST00000527644 SRA1Q9HD15 236 aaKnown RBP22.57■■□□□ 1.2
TSPAN4-217ENST00000527644 VNN3Q9NY84 501 aa22.57■■□□□ 1.2
TSPAN4-217ENST00000527644 ASH2LQ9UBL3 628 aa22.57■■□□□ 1.2
TSPAN4-217ENST00000527644 U3KQV3 271 aa22.57■■□□□ 1.2
TSPAN4-217ENST00000527644 IGLV1-36A0A0B4J1U3 117 aa22.56■■□□□ 1.2
TSPAN4-217ENST00000527644 DCTN6O00399 190 aa22.56■■□□□ 1.2
TSPAN4-217ENST00000527644 IGHV3-13P01766 116 aa22.56■■□□□ 1.2
TSPAN4-217ENST00000527644 GCH1P30793 250 aa22.56■■□□□ 1.2
TSPAN4-217ENST00000527644 CENPAP49450 140 aa22.56■■□□□ 1.2
TSPAN4-217ENST00000527644 ARHGDIAP52565 204 aa22.56■■□□□ 1.2
TSPAN4-217ENST00000527644 GGTLC2Q14390 218 aa22.56■■□□□ 1.2
TSPAN4-217ENST00000527644 CLEC12AQ5QGZ9 265 aa22.56■■□□□ 1.2
TSPAN4-217ENST00000527644 VASH1Q7L8A9 365 aaPredicted RBP22.56■■□□□ 1.2
TSPAN4-217ENST00000527644 ABHD4Q8TB40 342 aa22.56■■□□□ 1.2
TSPAN4-217ENST00000527644 SNX33Q8WV41 574 aa22.56■■□□□ 1.2
TSPAN4-217ENST00000527644 MARS2Q96GW9 593 aaKnown RBP22.56■■□□□ 1.2
TSPAN4-217ENST00000527644 DGCR6LQ9BY27 220 aa22.56■■□□□ 1.2
TSPAN4-217ENST00000527644 BPESC1Q9GZL8 116 aa22.56■■□□□ 1.2
TSPAN4-217ENST00000527644 RACGAP1Q9H0H5 632 aa22.56■■□□□ 1.2
TSPAN4-217ENST00000527644 HINT3Q9NQE9 182 aaKnown RBP22.56■■□□□ 1.2
TSPAN4-217ENST00000527644 PLEK2Q9NYT0 353 aa22.56■■□□□ 1.2
TSPAN4-217ENST00000527644 SONP18583 2426 aaKnown RBP22.55■■□□□ 1.2
TSPAN4-217ENST00000527644 C17orf100A8MU93 164 aa22.55■■□□□ 1.2
TSPAN4-217ENST00000527644 GAAP10253 952 aa22.55■■□□□ 1.2
TSPAN4-217ENST00000527644 GSTM3P21266 225 aa22.55■■□□□ 1.2
TSPAN4-217ENST00000527644 HTR5AP47898 357 aa22.55■■□□□ 1.2
TSPAN4-217ENST00000527644 ALKBH6Q3KRA9 238 aa22.55■■□□□ 1.2
TSPAN4-217ENST00000527644 MBNL2Q5VZF2 373 aaKnown RBP22.55■■□□□ 1.2
TSPAN4-217ENST00000527644 ZBTB46Q86UZ6 589 aa22.55■■□□□ 1.2
TSPAN4-217ENST00000527644 OR52E2Q8NGJ4 325 aa22.55■■□□□ 1.2
TSPAN4-217ENST00000527644 SLC25A40Q8TBP6 338 aa22.55■■□□□ 1.2
TSPAN4-217ENST00000527644 RPRD1BQ9NQG5 326 aaKnown RBP22.55■■□□□ 1.2
TSPAN4-217ENST00000527644 DHRS12A0PJE2 317 aa22.54■■□□□ 1.2
TSPAN4-217ENST00000527644 OR6C68A6NDL8 312 aa22.54■■□□□ 1.2
TSPAN4-217ENST00000527644 H3BSA7 217 aa22.54■■□□□ 1.2
TSPAN4-217ENST00000527644 BHLHE40O14503 412 aa22.54■■□□□ 1.2
TSPAN4-217ENST00000527644 DNAJC8O75937 253 aaPredicted RBP22.54■■□□□ 1.2
TSPAN4-217ENST00000527644 CST1P01037 141 aa22.54■■□□□ 1.2
TSPAN4-217ENST00000527644 NGFP01138 241 aa22.54■■□□□ 1.2
TSPAN4-217ENST00000527644 HPXP02790 462 aa22.54■■□□□ 1.2
TSPAN4-217ENST00000527644 PPP1CBP62140 327 aa22.54■■□□□ 1.2
TSPAN4-217ENST00000527644 GLO1Q04760 184 aa22.54■■□□□ 1.2
TSPAN4-217ENST00000527644 KHDRBS1Q07666 443 aaKnown RBP eCLIP22.54■■□□□ 1.2
TSPAN4-217ENST00000527644 ELFN2Q5R3F8 820 aa22.54■■□□□ 1.2
TSPAN4-217ENST00000527644 SPATA46Q5T0L3 261 aa22.54■■□□□ 1.2
TSPAN4-217ENST00000527644 SLC35F1Q5T1Q4 408 aa22.54■■□□□ 1.2
TSPAN4-217ENST00000527644 OTPQ5XKR4 325 aa22.54■■□□□ 1.2
TSPAN4-217ENST00000527644 TMEM154Q6P9G4 183 aa22.54■■□□□ 1.2
TSPAN4-217ENST00000527644 RFPL4BQ6ZWI9 263 aa22.54■■□□□ 1.2
TSPAN4-217ENST00000527644 NPEPL1Q8NDH3 523 aa22.54■■□□□ 1.2
TSPAN4-217ENST00000527644 SDR9C7Q8NEX9 313 aa22.54■■□□□ 1.2
TSPAN4-217ENST00000527644 KLF14Q8TD94 323 aaPredicted RBP22.54■■□□□ 1.2
TSPAN4-217ENST00000527644 CANT1Q8WVQ1 401 aa22.54■■□□□ 1.2
TSPAN4-217ENST00000527644 PLA2G12AQ9BZM1 189 aa22.54■■□□□ 1.2
TSPAN4-217ENST00000527644 OR2J1Q9GZK6 312 aa22.54■■□□□ 1.2
TSPAN4-217ENST00000527644 YAE1D1Q9NRH1 226 aa22.54■■□□□ 1.2
TSPAN4-217ENST00000527644 TBCCD1Q9NVR7 557 aa22.54■■□□□ 1.2
TSPAN4-217ENST00000527644 POLR1DQ9Y2S0 133 aa22.54■■□□□ 1.2
TSPAN4-217ENST00000527644 YLPM1P49750 1951 aaKnown RBP22.54■■□□□ 1.2
TSPAN4-217ENST00000527644 IGHV4-61A0A0C4DH41 118 aa22.53■■□□□ 1.2
TSPAN4-217ENST00000527644 ABHD16AO95870 558 aa22.53■■□□□ 1.2
TSPAN4-217ENST00000527644 GPANK1O95872 356 aa22.53■■□□□ 1.2
TSPAN4-217ENST00000527644 MT-ND5P03915 603 aa22.53■■□□□ 1.2
TSPAN4-217ENST00000527644 MRPS11P82912 194 aaKnown RBP22.53■■□□□ 1.2
TSPAN4-217ENST00000527644 RIN1Q13671 783 aa22.53■■□□□ 1.2
TSPAN4-217ENST00000527644 PCGF3Q3KNV8 242 aa22.53■■□□□ 1.2
TSPAN4-217ENST00000527644 CCDC92Q53HC0 331 aaPredicted RBP22.53■■□□□ 1.2
TSPAN4-217ENST00000527644 CYB5R2Q6BCY4 276 aa22.53■■□□□ 1.2
TSPAN4-217ENST00000527644 GJC3Q8NFK1 279 aa22.53■■□□□ 1.2
TSPAN4-217ENST00000527644 RDH5Q92781 318 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms