RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 F5H0A9 414 aaPredicted RBP11.27□□□□□ -0.61
CAPN1-208ENST00000527323 TGFBR3LH3BV60 316 aa11.27□□□□□ -0.61
CAPN1-208ENST00000527323 ALOX12BO75342 701 aa11.27□□□□□ -0.61
CAPN1-208ENST00000527323 PLGP00747 810 aaPredicted RBP11.27□□□□□ -0.61
CAPN1-208ENST00000527323 HLA-AP01891 365 aaKnown RBP11.27□□□□□ -0.61
CAPN1-208ENST00000527323 SPARCP09486 303 aa11.27□□□□□ -0.61
CAPN1-208ENST00000527323 RNH1P13489 461 aaKnown RBP11.27□□□□□ -0.61
CAPN1-208ENST00000527323 MAOAP21397 527 aa11.27□□□□□ -0.61
CAPN1-208ENST00000527323 CNR1P21554 472 aa11.27□□□□□ -0.61
CAPN1-208ENST00000527323 DHPSP49366 369 aaPredicted RBP11.27□□□□□ -0.61
CAPN1-208ENST00000527323 AKR1C2P52895 323 aa11.27□□□□□ -0.61
CAPN1-208ENST00000527323 SKP1P63208 163 aa11.27□□□□□ -0.61
CAPN1-208ENST00000527323 AKR1C1Q04828 323 aa11.27□□□□□ -0.61
CAPN1-208ENST00000527323 BIKQ13323 160 aa11.27□□□□□ -0.61
CAPN1-208ENST00000527323 ARMC6Q6NXE6 501 aa11.27□□□□□ -0.61
CAPN1-208ENST00000527323 ZNF440Q8IYI8 595 aa11.27□□□□□ -0.61
CAPN1-208ENST00000527323 JAGN1Q8N5M9 183 aa11.27□□□□□ -0.61
CAPN1-208ENST00000527323 OR1J4Q8NGS1 313 aa11.27□□□□□ -0.61
CAPN1-208ENST00000527323 LMX1AQ8TE12 382 aa11.27□□□□□ -0.61
CAPN1-208ENST00000527323 RSC1A1Q92681 617 aa11.27□□□□□ -0.61
CAPN1-208ENST00000527323 HOXB13Q92826 284 aaPredicted RBP11.27□□□□□ -0.61
CAPN1-208ENST00000527323 ZBTB8AQ96BR9 441 aa11.27□□□□□ -0.61
CAPN1-208ENST00000527323 SLC25A36Q96CQ1 311 aa11.27□□□□□ -0.61
CAPN1-208ENST00000527323 CPNE7Q9UBL6 633 aa11.27□□□□□ -0.61
CAPN1-208ENST00000527323 PCOLCE2Q9UKZ9 415 aa11.27□□□□□ -0.61
CAPN1-208ENST00000527323 BOD1L1Q8NFC6 3051 aa11.27□□□□□ -0.61
CAPN1-208ENST00000527323 PATE3B3GLJ2 98 aa11.27□□□□□ -0.61
CAPN1-208ENST00000527323 DISC1C4P0D8 188 aa11.27□□□□□ -0.61
CAPN1-208ENST00000527323 CLDN4O14493 209 aa11.27□□□□□ -0.61
CAPN1-208ENST00000527323 APEHP13798 732 aaKnown RBP11.27□□□□□ -0.61
CAPN1-208ENST00000527323 CSRP1P21291 193 aaKnown RBP11.27□□□□□ -0.61
CAPN1-208ENST00000527323 DLSTP36957 453 aa11.27□□□□□ -0.61
CAPN1-208ENST00000527323 DHRS2Q13268 280 aa11.27□□□□□ -0.61
CAPN1-208ENST00000527323 CD226Q15762 336 aa11.27□□□□□ -0.61
CAPN1-208ENST00000527323 CCDC157Q569K6 752 aa11.27□□□□□ -0.61
CAPN1-208ENST00000527323 PRAMEF17Q5VTA0 474 aa11.27□□□□□ -0.61
CAPN1-208ENST00000527323 KIAA0895LQ68EN5 471 aa11.27□□□□□ -0.61
CAPN1-208ENST00000527323 OR10K2Q6IF99 312 aa11.27□□□□□ -0.61
CAPN1-208ENST00000527323 MED25Q71SY5 747 aa11.27□□□□□ -0.61
CAPN1-208ENST00000527323 ATG4DQ86TL0 474 aaPredicted RBP11.27□□□□□ -0.61
CAPN1-208ENST00000527323 CCDC36Q8IYA8 594 aa11.27□□□□□ -0.61
CAPN1-208ENST00000527323 METTL27Q8N6F8 245 aaPredicted RBP11.27□□□□□ -0.61
CAPN1-208ENST00000527323 LRRC75AQ8NAA5 344 aa11.27□□□□□ -0.61
CAPN1-208ENST00000527323 SLC25A28Q96A46 364 aa11.27□□□□□ -0.61
CAPN1-208ENST00000527323 TSNAXQ99598 290 aaKnown RBP11.27□□□□□ -0.61
CAPN1-208ENST00000527323 H7C2Y5 167 aa11.26□□□□□ -0.61
CAPN1-208ENST00000527323 CD2P06729 351 aa11.26□□□□□ -0.61
CAPN1-208ENST00000527323 HTR2CP28335 458 aa11.26□□□□□ -0.61
CAPN1-208ENST00000527323 CXCL12P48061 93 aa11.26□□□□□ -0.61
CAPN1-208ENST00000527323 ADAM8P78325 824 aa11.26□□□□□ -0.61
CAPN1-208ENST00000527323 FZD2Q14332 565 aa11.26□□□□□ -0.61
CAPN1-208ENST00000527323 ATPAF1Q5TC12 328 aaPredicted RBP11.26□□□□□ -0.61
CAPN1-208ENST00000527323 C11orf87Q6NUJ2 197 aa11.26□□□□□ -0.61
CAPN1-208ENST00000527323 OR2W3Q7Z3T1 314 aa11.26□□□□□ -0.61
CAPN1-208ENST00000527323 KLHDC7BQ96G42 594 aa11.26□□□□□ -0.61
CAPN1-208ENST00000527323 DNTTIP1Q9H147 329 aa11.26□□□□□ -0.61
CAPN1-208ENST00000527323 TMEM265A0A087WTH1 108 aa11.26□□□□□ -0.61
CAPN1-208ENST00000527323 FITM1A5D6W6 292 aa11.26□□□□□ -0.61
CAPN1-208ENST00000527323 OR2AT4A6NND4 320 aa11.26□□□□□ -0.61
CAPN1-208ENST00000527323 SCDO00767 359 aa11.26□□□□□ -0.61
CAPN1-208ENST00000527323 NUDT14O95848 222 aa11.26□□□□□ -0.61
CAPN1-208ENST00000527323 TACR3P29371 465 aa11.26□□□□□ -0.61
CAPN1-208ENST00000527323 SQSTM1Q13501 440 aa11.26□□□□□ -0.61
CAPN1-208ENST00000527323 SLC17A1Q14916 467 aa11.26□□□□□ -0.61
CAPN1-208ENST00000527323 NR0B2Q15466 257 aa11.26□□□□□ -0.61
CAPN1-208ENST00000527323 CDNFQ49AH0 187 aa11.26□□□□□ -0.61
CAPN1-208ENST00000527323 EEF1A1P5Q5VTE0 462 aa11.26□□□□□ -0.61
CAPN1-208ENST00000527323 JMJD6Q6NYC1 403 aaPredicted RBP11.26□□□□□ -0.61
CAPN1-208ENST00000527323 KCNRGQ8N5I3 272 aa11.26□□□□□ -0.61
CAPN1-208ENST00000527323 TMEM229BQ8NBD8 167 aa11.26□□□□□ -0.61
CAPN1-208ENST00000527323 OTOSQ8NHW6 89 aa11.26□□□□□ -0.61
CAPN1-208ENST00000527323 CASTOR1Q8WTX7 329 aa11.26□□□□□ -0.61
CAPN1-208ENST00000527323 ASB13Q8WXK3 278 aa11.26□□□□□ -0.61
CAPN1-208ENST00000527323 EPHA6Q9UF33 1036 aa11.26□□□□□ -0.61
CAPN1-208ENST00000527323 MLXQ9UH92 298 aa11.26□□□□□ -0.61
CAPN1-208ENST00000527323 MPDZO75970 2070 aa11.25□□□□□ -0.61
CAPN1-208ENST00000527323 PHYHO14832 338 aa11.25□□□□□ -0.61
CAPN1-208ENST00000527323 OR2F2O95006 317 aa11.25□□□□□ -0.61
CAPN1-208ENST00000527323 ST6GAL1P15907 406 aa11.25□□□□□ -0.61
CAPN1-208ENST00000527323 DNASE1L1P49184 302 aa11.25□□□□□ -0.61
CAPN1-208ENST00000527323 CAPZA1P52907 286 aa11.25□□□□□ -0.61
CAPN1-208ENST00000527323 UBE2IP63279 158 aaKnown RBP11.25□□□□□ -0.61
CAPN1-208ENST00000527323 CXADRP78310 365 aa11.25□□□□□ -0.61
CAPN1-208ENST00000527323 SPOCK1Q08629 439 aa11.25□□□□□ -0.61
CAPN1-208ENST00000527323 OR2F1Q13607 317 aa11.25□□□□□ -0.61
CAPN1-208ENST00000527323 KLHL26Q53HC5 615 aa11.25□□□□□ -0.61
CAPN1-208ENST00000527323 C3orf33Q6P1S2 294 aa11.25□□□□□ -0.61
CAPN1-208ENST00000527323 TMEM88Q6PEY1 159 aa11.25□□□□□ -0.61
CAPN1-208ENST00000527323 LINC00518Q8N0U6 118 aa11.25□□□□□ -0.61
CAPN1-208ENST00000527323 OR4S1Q8NGB4 309 aa11.25□□□□□ -0.61
CAPN1-208ENST00000527323 OR5M8Q8NGP6 311 aa11.25□□□□□ -0.61
CAPN1-208ENST00000527323 THAP6Q8TBB0 222 aa11.25□□□□□ -0.61
CAPN1-208ENST00000527323 PPP1R1CQ8WVI7 109 aa11.25□□□□□ -0.61
CAPN1-208ENST00000527323 THRSPQ92748 146 aa11.25□□□□□ -0.61
CAPN1-208ENST00000527323 TAAR8Q969N4 342 aa11.25□□□□□ -0.61
CAPN1-208ENST00000527323 C1orf198Q9H425 327 aa11.25□□□□□ -0.61
CAPN1-208ENST00000527323 ASF1BQ9NVP2 202 aa11.25□□□□□ -0.61
CAPN1-208ENST00000527323 TAS2R4Q9NYW5 299 aa11.25□□□□□ -0.61
CAPN1-208ENST00000527323 A0A1W2PPC1 479 aa11.25□□□□□ -0.61
CAPN1-208ENST00000527323 A6NCN8 305 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms