RNA–Protein interactions for RNA: ENST00000525241.1

CD44-215, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 440 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-215ENST00000525241 PRR9Q5T870 116 aa2.24□□□□□ -2.05
CD44-215ENST00000525241 SAXO2Q658L1 398 aa2.24□□□□□ -2.05
CD44-215ENST00000525241 OR4K5Q8NGD3 323 aa2.24□□□□□ -2.05
CD44-215ENST00000525241 KCNG3Q8TAE7 436 aa2.24□□□□□ -2.05
CD44-215ENST00000525241 PIFOQ8TCI5 191 aa2.24□□□□□ -2.05
CD44-215ENST00000525241 KIFAP3Q92845 792 aa2.24□□□□□ -2.05
CD44-215ENST00000525241 CAMK2N2Q96S95 79 aa2.24□□□□□ -2.05
CD44-215ENST00000525241 ILKAPQ9H0C8 392 aaPredicted RBP2.24□□□□□ -2.05
CD44-215ENST00000525241 OR51M1Q9H341 326 aa2.24□□□□□ -2.05
CD44-215ENST00000525241 TSSC4Q9Y5U2 329 aaPredicted RBP2.24□□□□□ -2.05
CD44-215ENST00000525241 USP47Q96K76 1375 aa2.23□□□□□ -2.05
CD44-215ENST00000525241 SOCS1O15524 211 aa2.23□□□□□ -2.05
CD44-215ENST00000525241 C1GALT1C1LP0DN25 315 aa2.23□□□□□ -2.05
CD44-215ENST00000525241 TNNI1P19237 187 aa2.23□□□□□ -2.05
CD44-215ENST00000525241 DTYMKP23919 212 aa2.23□□□□□ -2.05
CD44-215ENST00000525241 FOXN2P32314 431 aa2.23□□□□□ -2.05
CD44-215ENST00000525241 SSTR5P35346 364 aa2.23□□□□□ -2.05
CD44-215ENST00000525241 NAA10P41227 235 aaPredicted RBP2.23□□□□□ -2.05
CD44-215ENST00000525241 RCAN2Q14206 197 aa2.23□□□□□ -2.05
CD44-215ENST00000525241 SNRNP35Q16560 246 aaKnown RBP2.23□□□□□ -2.05
CD44-215ENST00000525241 CERS6Q6ZMG9 384 aa2.23□□□□□ -2.05
CD44-215ENST00000525241 PRELID2Q8N945 189 aa2.23□□□□□ -2.05
CD44-215ENST00000525241 OR2A1Q8NGT9 310 aa2.23□□□□□ -2.05
CD44-215ENST00000525241 OR5B3Q8NH48 314 aa2.23□□□□□ -2.05
CD44-215ENST00000525241 SLC2A14Q8TDB8 520 aa2.23□□□□□ -2.05
CD44-215ENST00000525241 SHC3Q92529 594 aa2.23□□□□□ -2.05
CD44-215ENST00000525241 NTAN1Q96AB6 310 aa2.23□□□□□ -2.05
CD44-215ENST00000525241 FLYWCH2Q96CP2 140 aaKnown RBP2.23□□□□□ -2.05
CD44-215ENST00000525241 RNF157Q96PX1 679 aa2.23□□□□□ -2.05
CD44-215ENST00000525241 TIMM17AQ99595 171 aa2.23□□□□□ -2.05
CD44-215ENST00000525241 DOK1Q99704 481 aa2.23□□□□□ -2.05
CD44-215ENST00000525241 SLC29A1Q99808 456 aa2.23□□□□□ -2.05
CD44-215ENST00000525241 NEUROG2Q9H2A3 272 aa2.23□□□□□ -2.05
CD44-215ENST00000525241 IKBKGQ9Y6K9 419 aa2.23□□□□□ -2.05
CD44-215ENST00000525241 S4R3C0 116 aa2.23□□□□□ -2.05
CD44-215ENST00000525241 AKNAQ7Z591 1439 aa2.23□□□□□ -2.05
CD44-215ENST00000525241 LRRIQ3A6PVS8 624 aaPredicted RBP2.22□□□□□ -2.05
CD44-215ENST00000525241 ZNF850A8MQ14 1090 aa2.22□□□□□ -2.05
CD44-215ENST00000525241 A8MUU9 505 aa2.22□□□□□ -2.05
CD44-215ENST00000525241 H0Y8G0 127 aa2.22□□□□□ -2.05
CD44-215ENST00000525241 NUPL2O15504 423 aaKnown RBP2.22□□□□□ -2.05
CD44-215ENST00000525241 KLHL41O60662 606 aa2.22□□□□□ -2.05
CD44-215ENST00000525241 HLA-DQA1P01909 254 aa2.22□□□□□ -2.05
CD44-215ENST00000525241 CD3GP09693 182 aa2.22□□□□□ -2.05
CD44-215ENST00000525241 WARSP23381 471 aaKnown RBP2.22□□□□□ -2.05
CD44-215ENST00000525241 DCKP27707 260 aa2.22□□□□□ -2.05
CD44-215ENST00000525241 KIR3DL2P43630 455 aa2.22□□□□□ -2.05
CD44-215ENST00000525241 CXCL12P48061 93 aa2.22□□□□□ -2.05
CD44-215ENST00000525241 SULT1E1P49888 294 aa2.22□□□□□ -2.05
CD44-215ENST00000525241 ACLYP53396 1101 aa2.22□□□□□ -2.05
CD44-215ENST00000525241 UBE2NP61088 152 aaKnown RBP2.22□□□□□ -2.05
CD44-215ENST00000525241 OR7A5Q15622 319 aa2.22□□□□□ -2.05
CD44-215ENST00000525241 ZNF726P1Q15940 193 aa2.22□□□□□ -2.05
CD44-215ENST00000525241 METTL13Q8N6R0 699 aa2.22□□□□□ -2.05
CD44-215ENST00000525241 GATSQ8NAP1 163 aa2.22□□□□□ -2.05
CD44-215ENST00000525241 LINC01560Q8TB33 94 aa2.22□□□□□ -2.05
CD44-215ENST00000525241 CIRBP-AS1Q8TBR5 109 aa2.22□□□□□ -2.05
CD44-215ENST00000525241 PHF10Q8WUB8 498 aaKnown RBP2.22□□□□□ -2.05
CD44-215ENST00000525241 OR5B12Q96R08 314 aa2.22□□□□□ -2.05
CD44-215ENST00000525241 TIMM29Q9BSF4 260 aa2.22□□□□□ -2.05
CD44-215ENST00000525241 PKIBQ9C010 78 aa2.22□□□□□ -2.05
CD44-215ENST00000525241 OR52D1Q9H346 318 aa2.22□□□□□ -2.05
CD44-215ENST00000525241 VANGL2Q9ULK5 521 aa2.22□□□□□ -2.05
CD44-215ENST00000525241 TUBGCP6Q96RT7 1819 aa2.21□□□□□ -2.05
CD44-215ENST00000525241 IGHV1OR15-9A0A0B4J2B8 117 aa2.21□□□□□ -2.06
CD44-215ENST00000525241 K7EM74 188 aa2.21□□□□□ -2.06
CD44-215ENST00000525241 ANXA5P08758 320 aa2.21□□□□□ -2.06
CD44-215ENST00000525241 UQCRFS1P1P0C7P4 283 aa2.21□□□□□ -2.06
CD44-215ENST00000525241 CSNK1EP49674 416 aaKnown RBP2.21□□□□□ -2.06
CD44-215ENST00000525241 ATP5IP56385 69 aaPredicted RBP2.21□□□□□ -2.06
CD44-215ENST00000525241 PITPNAQ00169 270 aa2.21□□□□□ -2.06
CD44-215ENST00000525241 AVPI1Q5T686 147 aa2.21□□□□□ -2.06
CD44-215ENST00000525241 ZFP1Q6P2D0 407 aa2.21□□□□□ -2.06
CD44-215ENST00000525241 SLC16A13Q7RTY0 426 aa2.21□□□□□ -2.06
CD44-215ENST00000525241 NANOGNBQ7Z5D8 188 aa2.21□□□□□ -2.06
CD44-215ENST00000525241 FAM228AQ86W67 206 aa2.21□□□□□ -2.06
CD44-215ENST00000525241 SLC22A9Q8IVM8 553 aa2.21□□□□□ -2.06
CD44-215ENST00000525241 CDKL3Q8IVW4 592 aaPredicted RBP2.21□□□□□ -2.06
CD44-215ENST00000525241 OR10AD1Q8NGE0 317 aa2.21□□□□□ -2.06
CD44-215ENST00000525241 OR6N1Q8NGY5 312 aa2.21□□□□□ -2.06
CD44-215ENST00000525241 TMEM9BQ9NQ34 198 aa2.21□□□□□ -2.06
CD44-215ENST00000525241 PALMO75781 387 aa2.2□□□□□ -2.06
CD44-215ENST00000525241 CD74P04233 296 aa2.2□□□□□ -2.06
CD44-215ENST00000525241 ACSM4P0C7M7 580 aa2.2□□□□□ -2.06
CD44-215ENST00000525241 ZNF806P0C7X5 589 aa2.2□□□□□ -2.06
CD44-215ENST00000525241 TNNT2P45379 298 aaPredicted RBP2.2□□□□□ -2.06
CD44-215ENST00000525241 QPRTQ15274 297 aa2.2□□□□□ -2.06
CD44-215ENST00000525241 PPP1R7Q15435 360 aa2.2□□□□□ -2.06
CD44-215ENST00000525241 SLC8B1Q6J4K2 584 aa2.2□□□□□ -2.06
CD44-215ENST00000525241 TMEM150AQ86TG1 271 aa2.2□□□□□ -2.06
CD44-215ENST00000525241 WDFY1Q8IWB7 410 aa2.2□□□□□ -2.06
CD44-215ENST00000525241 OR7G2Q8NG99 324 aa2.2□□□□□ -2.06
CD44-215ENST00000525241 AKR7LQ8NHP1 331 aa2.2□□□□□ -2.06
CD44-215ENST00000525241 ACMSDQ8TDX5 336 aa2.2□□□□□ -2.06
CD44-215ENST00000525241 C17orf50Q8WW18 174 aa2.2□□□□□ -2.06
CD44-215ENST00000525241 PTX4Q96A99 478 aa2.2□□□□□ -2.06
CD44-215ENST00000525241 ZNF488Q96MN9 340 aa2.2□□□□□ -2.06
CD44-215ENST00000525241 UXTQ9UBK9 157 aaPredicted RBP2.2□□□□□ -2.06
CD44-215ENST00000525241 LGALS13Q9UHV8 139 aa2.2□□□□□ -2.06
CD44-215ENST00000525241 SIGLEC9Q9Y336 463 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms