RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 CACNG6Q9BXT2 260 aa10.84□□□□□ -0.67
VEGFA-225ENST00000523950 SLC25A19Q9HC21 320 aa10.84□□□□□ -0.67
VEGFA-225ENST00000523950 EIF3KQ9UBQ5 218 aaKnown RBP10.84□□□□□ -0.67
VEGFA-225ENST00000523950 POLR1DQ9Y2S0 133 aa10.84□□□□□ -0.67
VEGFA-225ENST00000523950 AKAP9Q99996 3911 aa10.84□□□□□ -0.67
VEGFA-225ENST00000523950 LRBAP50851 2863 aa10.83□□□□□ -0.68
VEGFA-225ENST00000523950 TEX15Q9BXT5 2789 aa10.83□□□□□ -0.68
VEGFA-225ENST00000523950 CREBBPQ92793 2442 aa10.83□□□□□ -0.68
VEGFA-225ENST00000523950 SGCEO43556 437 aa10.83□□□□□ -0.68
VEGFA-225ENST00000523950 DOK2O60496 412 aa10.83□□□□□ -0.68
VEGFA-225ENST00000523950 PAICSP22234 425 aaKnown RBP10.83□□□□□ -0.68
VEGFA-225ENST00000523950 PRKACGP22612 351 aa10.83□□□□□ -0.68
VEGFA-225ENST00000523950 APEX1P27695 318 aaKnown RBP10.83□□□□□ -0.68
VEGFA-225ENST00000523950 CDKN1AP38936 164 aa10.83□□□□□ -0.68
VEGFA-225ENST00000523950 PPOXP50336 477 aa10.83□□□□□ -0.68
VEGFA-225ENST00000523950 ESRRGP62508 458 aa10.83□□□□□ -0.68
VEGFA-225ENST00000523950 ADAM8P78325 824 aa10.83□□□□□ -0.68
VEGFA-225ENST00000523950 CDK5Q00535 292 aa10.83□□□□□ -0.68
VEGFA-225ENST00000523950 TEKQ02763 1124 aa10.83□□□□□ -0.68
VEGFA-225ENST00000523950 CRMP1Q14194 572 aa10.83□□□□□ -0.68
VEGFA-225ENST00000523950 GINS1Q14691 196 aa10.83□□□□□ -0.68
VEGFA-225ENST00000523950 RAB35Q15286 201 aa10.83□□□□□ -0.68
VEGFA-225ENST00000523950 MST1LQ2TV78 715 aa10.83□□□□□ -0.68
VEGFA-225ENST00000523950 Q5PR19 223 aa10.83□□□□□ -0.68
VEGFA-225ENST00000523950 TGIF2LYQ8IUE0 185 aa10.83□□□□□ -0.68
VEGFA-225ENST00000523950 KRTAP1-3Q8IUG1 177 aa10.83□□□□□ -0.68
VEGFA-225ENST00000523950 PROKR2Q8NFJ6 384 aa10.83□□□□□ -0.68
VEGFA-225ENST00000523950 MRPL24Q96A35 216 aaKnown RBP10.83□□□□□ -0.68
VEGFA-225ENST00000523950 FOXN4Q96NZ1 517 aa10.83□□□□□ -0.68
VEGFA-225ENST00000523950 DCLRE1CQ96SD1 692 aaKnown RBP10.83□□□□□ -0.68
VEGFA-225ENST00000523950 PRRG3Q9BZD7 231 aa10.83□□□□□ -0.68
VEGFA-225ENST00000523950 NMNAT2Q9BZQ4 307 aa10.83□□□□□ -0.68
VEGFA-225ENST00000523950 HDHD2Q9H0R4 259 aa10.83□□□□□ -0.68
VEGFA-225ENST00000523950 PLK3Q9H4B4 646 aa10.83□□□□□ -0.68
VEGFA-225ENST00000523950 PLEK2Q9NYT0 353 aa10.83□□□□□ -0.68
VEGFA-225ENST00000523950 ASH2LQ9UBL3 628 aa10.83□□□□□ -0.68
VEGFA-225ENST00000523950 LRCH1Q9Y2L9 728 aa10.83□□□□□ -0.68
VEGFA-225ENST00000523950 H3BSA7 217 aa10.82□□□□□ -0.68
VEGFA-225ENST00000523950 J3QW42 95 aa10.82□□□□□ -0.68
VEGFA-225ENST00000523950 MPZL1O95297 269 aa10.82□□□□□ -0.68
VEGFA-225ENST00000523950 HLA-DQA2P01906 255 aa10.82□□□□□ -0.68
VEGFA-225ENST00000523950 ZNF823P16415 610 aa10.82□□□□□ -0.68
VEGFA-225ENST00000523950 TUBG1P23258 451 aa10.82□□□□□ -0.68
VEGFA-225ENST00000523950 POU1F1P28069 291 aa10.82□□□□□ -0.68
VEGFA-225ENST00000523950 DAPP51397 102 aa10.82□□□□□ -0.68
VEGFA-225ENST00000523950 CRISP1P54107 249 aa10.82□□□□□ -0.68
VEGFA-225ENST00000523950 UCP2P55851 309 aa10.82□□□□□ -0.68
VEGFA-225ENST00000523950 SELENOVP59797 346 aa10.82□□□□□ -0.68
VEGFA-225ENST00000523950 HIST1H3AP68431 136 aa10.82□□□□□ -0.68
VEGFA-225ENST00000523950 HIST2H3PS2Q5TEC6 136 aa10.82□□□□□ -0.68
VEGFA-225ENST00000523950 KDM4DQ6B0I6 523 aa10.82□□□□□ -0.68
VEGFA-225ENST00000523950 RGS7BPQ6MZT1 257 aaPredicted RBP10.82□□□□□ -0.68
VEGFA-225ENST00000523950 ZNF774Q6NX45 483 aa10.82□□□□□ -0.68
VEGFA-225ENST00000523950 HIST2H3AQ71DI3 136 aa10.82□□□□□ -0.68
VEGFA-225ENST00000523950 VASH1Q7L8A9 365 aaPredicted RBP10.82□□□□□ -0.68
VEGFA-225ENST00000523950 AMIGO2Q86SJ2 522 aa10.82□□□□□ -0.68
VEGFA-225ENST00000523950 PAQR4Q8N4S7 273 aaPredicted RBP10.82□□□□□ -0.68
VEGFA-225ENST00000523950 CYB561A3Q8NBI2 242 aa10.82□□□□□ -0.68
VEGFA-225ENST00000523950 PYDC1Q8WXC3 89 aa10.82□□□□□ -0.68
VEGFA-225ENST00000523950 COQ7Q99807 217 aa10.82□□□□□ -0.68
VEGFA-225ENST00000523950 CDADC1Q9BWV3 514 aa10.82□□□□□ -0.68
VEGFA-225ENST00000523950 FN3KQ9H479 309 aa10.82□□□□□ -0.68
VEGFA-225ENST00000523950 ELOVL3Q9HB03 270 aa10.82□□□□□ -0.68
VEGFA-225ENST00000523950 TUBG2Q9NRH3 451 aa10.82□□□□□ -0.68
VEGFA-225ENST00000523950 KRT84Q9NSB2 600 aa10.82□□□□□ -0.68
VEGFA-225ENST00000523950 MYO9AB2RTY4 2548 aa10.82□□□□□ -0.68
VEGFA-225ENST00000523950 LOC100509620A0A075B734 347 aa10.81□□□□□ -0.68
VEGFA-225ENST00000523950 C5orf49A4QMS7 147 aa10.81□□□□□ -0.68
VEGFA-225ENST00000523950 OR6C6A6NF89 314 aa10.81□□□□□ -0.68
VEGFA-225ENST00000523950 SURF4O15260 269 aa10.81□□□□□ -0.68
VEGFA-225ENST00000523950 SYNGR3O43761 229 aa10.81□□□□□ -0.68
VEGFA-225ENST00000523950 GPRIN2O60269 458 aa10.81□□□□□ -0.68
VEGFA-225ENST00000523950 TFP02787 698 aa10.81□□□□□ -0.68
VEGFA-225ENST00000523950 ERCC1P07992 297 aaPredicted RBP10.81□□□□□ -0.68
VEGFA-225ENST00000523950 CCL2P13500 99 aa10.81□□□□□ -0.68
VEGFA-225ENST00000523950 SPI1P17947 270 aa10.81□□□□□ -0.68
VEGFA-225ENST00000523950 CCNOP22674 350 aa10.81□□□□□ -0.68
VEGFA-225ENST00000523950 FMO3P31513 532 aa10.81□□□□□ -0.68
VEGFA-225ENST00000523950 HTR5AP47898 357 aa10.81□□□□□ -0.68
VEGFA-225ENST00000523950 BLMHQ13867 455 aa10.81□□□□□ -0.68
VEGFA-225ENST00000523950 CCDC92Q53HC0 331 aaPredicted RBP10.81□□□□□ -0.68
VEGFA-225ENST00000523950 TEX30Q5JUR7 227 aa10.81□□□□□ -0.68
VEGFA-225ENST00000523950 ELFN2Q5R3F8 820 aa10.81□□□□□ -0.68
VEGFA-225ENST00000523950 SLC18B1Q6NT16 456 aa10.81□□□□□ -0.68
VEGFA-225ENST00000523950 ACSM5Q6NUN0 579 aa10.81□□□□□ -0.68
VEGFA-225ENST00000523950 IQCF1Q8N6M8 205 aa10.81□□□□□ -0.68
VEGFA-225ENST00000523950 OR9Q1Q8NGQ5 310 aa10.81□□□□□ -0.68
VEGFA-225ENST00000523950 OR2AJ1Q8NGZ0 328 aa10.81□□□□□ -0.68
VEGFA-225ENST00000523950 OR1F12Q8NHA8 337 aa10.81□□□□□ -0.68
VEGFA-225ENST00000523950 PLEKHA8Q96JA3 519 aa10.81□□□□□ -0.68
VEGFA-225ENST00000523950 COG8Q96MW5 612 aa10.81□□□□□ -0.68
VEGFA-225ENST00000523950 DOK1Q99704 481 aa10.81□□□□□ -0.68
VEGFA-225ENST00000523950 RBM4BQ9BQ04 359 aaKnown RBP10.81□□□□□ -0.68
VEGFA-225ENST00000523950 VCXQ9H320 206 aa10.81□□□□□ -0.68
VEGFA-225ENST00000523950 TBCCD1Q9NVR7 557 aa10.81□□□□□ -0.68
VEGFA-225ENST00000523950 MRPL22Q9NWU5 206 aaKnown RBP10.81□□□□□ -0.68
VEGFA-225ENST00000523950 CYB5R1Q9UHQ9 305 aa10.81□□□□□ -0.68
VEGFA-225ENST00000523950 GPR160Q9UJ42 338 aa10.81□□□□□ -0.68
VEGFA-225ENST00000523950 OAZ3Q9UMX2 235 aa10.81□□□□□ -0.68
VEGFA-225ENST00000523950 LHFPL6Q9Y693 200 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms