RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 B3GLCTQ6Y288 498 aa12.36□□□□□ -0.43
SDC2-203ENST00000519587 SKA3Q8IX90 412 aa12.36□□□□□ -0.43
SDC2-203ENST00000519587 SLC35F2Q8IXU6 374 aa12.36□□□□□ -0.43
SDC2-203ENST00000519587 GJC3Q8NFK1 279 aa12.36□□□□□ -0.43
SDC2-203ENST00000519587 BPIFB6Q8NFQ5 453 aa12.36□□□□□ -0.43
SDC2-203ENST00000519587 OR52N5Q8NH56 324 aa12.36□□□□□ -0.43
SDC2-203ENST00000519587 HTRA1Q92743 480 aa12.36□□□□□ -0.43
SDC2-203ENST00000519587 HDHD2Q9H0R4 259 aa12.36□□□□□ -0.43
SDC2-203ENST00000519587 C1orf198Q9H425 327 aa12.36□□□□□ -0.43
SDC2-203ENST00000519587 SLC24A3Q9HC58 644 aa12.36□□□□□ -0.43
SDC2-203ENST00000519587 CYB5R1Q9UHQ9 305 aa12.36□□□□□ -0.43
SDC2-203ENST00000519587 LAMP5Q9UJQ1 280 aa12.36□□□□□ -0.43
SDC2-203ENST00000519587 SGCEO43556 437 aa12.35□□□□□ -0.43
SDC2-203ENST00000519587 OR2T7P0C7T2 308 aa12.35□□□□□ -0.43
SDC2-203ENST00000519587 ZNF32P17041 273 aa12.35□□□□□ -0.43
SDC2-203ENST00000519587 EIF2B1Q14232 305 aaKnown RBP12.35□□□□□ -0.43
SDC2-203ENST00000519587 RAB35Q15286 201 aa12.35□□□□□ -0.43
SDC2-203ENST00000519587 KCTD18Q6PI47 426 aaPredicted RBP12.35□□□□□ -0.43
SDC2-203ENST00000519587 UGT2A3Q6UWM9 527 aa12.35□□□□□ -0.43
SDC2-203ENST00000519587 DPY19L4Q7Z388 723 aa12.35□□□□□ -0.43
SDC2-203ENST00000519587 ALDH16A1Q8IZ83 802 aa12.35□□□□□ -0.43
SDC2-203ENST00000519587 OR10H4Q8NGA5 316 aa12.35□□□□□ -0.43
SDC2-203ENST00000519587 OR2T27Q8NH04 317 aa12.35□□□□□ -0.43
SDC2-203ENST00000519587 OTOSQ8NHW6 89 aa12.35□□□□□ -0.43
SDC2-203ENST00000519587 IPCEF1Q8WWN9 437 aaPredicted RBP12.35□□□□□ -0.43
SDC2-203ENST00000519587 ASB17Q8WXJ9 295 aa12.35□□□□□ -0.43
SDC2-203ENST00000519587 MYDGFQ969H8 173 aa12.35□□□□□ -0.43
SDC2-203ENST00000519587 LGALS12Q96DT0 336 aa12.35□□□□□ -0.43
SDC2-203ENST00000519587 FBXO17Q96EF6 278 aa12.35□□□□□ -0.43
SDC2-203ENST00000519587 YTHDF1Q9BYJ9 559 aaKnown RBP12.35□□□□□ -0.43
SDC2-203ENST00000519587 AMBNQ9NP70 447 aa12.35□□□□□ -0.43
SDC2-203ENST00000519587 INPP5EQ9NRR6 644 aa12.35□□□□□ -0.43
SDC2-203ENST00000519587 MRPS18AQ9NVS2 196 aaKnown RBP12.35□□□□□ -0.43
SDC2-203ENST00000519587 PLEK2Q9NYT0 353 aa12.35□□□□□ -0.43
SDC2-203ENST00000519587 PLEKHB1Q9UF11 243 aaPredicted RBP12.35□□□□□ -0.43
SDC2-203ENST00000519587 ATPIF1Q9UII2 106 aa12.35□□□□□ -0.43
SDC2-203ENST00000519587 GDF2Q9UK05 429 aaPredicted RBP12.35□□□□□ -0.43
SDC2-203ENST00000519587 SLC25A15Q9Y619 301 aa12.35□□□□□ -0.43
SDC2-203ENST00000519587 LHFPL6Q9Y693 200 aa12.35□□□□□ -0.43
SDC2-203ENST00000519587 IQCMA0A1B0GVH7 501 aa12.34□□□□□ -0.43
SDC2-203ENST00000519587 TUBAL3A6NHL2 446 aa12.34□□□□□ -0.43
SDC2-203ENST00000519587 XPNPEP2O43895 674 aa12.34□□□□□ -0.43
SDC2-203ENST00000519587 DOK2O60496 412 aa12.34□□□□□ -0.43
SDC2-203ENST00000519587 APOL3O95236 402 aa12.34□□□□□ -0.43
SDC2-203ENST00000519587 SCG5P05408 212 aa12.34□□□□□ -0.43
SDC2-203ENST00000519587 LYNP07948 512 aa12.34□□□□□ -0.43
SDC2-203ENST00000519587 MYL12AP19105 171 aa12.34□□□□□ -0.43
SDC2-203ENST00000519587 DCKP27707 260 aa12.34□□□□□ -0.43
SDC2-203ENST00000519587 RAB1AP62820 205 aa12.34□□□□□ -0.43
SDC2-203ENST00000519587 ECH1Q13011 328 aa12.34□□□□□ -0.43
SDC2-203ENST00000519587 TAB1Q15750 504 aa12.34□□□□□ -0.43
SDC2-203ENST00000519587 AHSA2Q719I0 299 aa12.34□□□□□ -0.43
SDC2-203ENST00000519587 DCXRQ7Z4W1 244 aa12.34□□□□□ -0.43
SDC2-203ENST00000519587 MDP1Q86V88 176 aa12.34□□□□□ -0.43
SDC2-203ENST00000519587 CDC20BQ86Y33 519 aa12.34□□□□□ -0.43
SDC2-203ENST00000519587 LINC00346Q8IVM7 164 aa12.34□□□□□ -0.43
SDC2-203ENST00000519587 STX19Q8N4C7 294 aa12.34□□□□□ -0.43
SDC2-203ENST00000519587 ACBD7Q8N6N7 88 aa12.34□□□□□ -0.43
SDC2-203ENST00000519587 FAM169BQ8N8A8 192 aa12.34□□□□□ -0.43
SDC2-203ENST00000519587 WDR31Q8NA23 367 aa12.34□□□□□ -0.43
SDC2-203ENST00000519587 ZNF540Q8NDQ6 660 aa12.34□□□□□ -0.43
SDC2-203ENST00000519587 COPS4Q9BT78 406 aa12.34□□□□□ -0.43
SDC2-203ENST00000519587 OR2H1Q9GZK4 316 aa12.34□□□□□ -0.43
SDC2-203ENST00000519587 NPDC1Q9NQX5 325 aaPredicted RBP12.34□□□□□ -0.43
SDC2-203ENST00000519587 CHCHD3Q9NX63 227 aaKnown RBP12.34□□□□□ -0.43
SDC2-203ENST00000519587 PSORS1C1Q9UIG5 152 aa12.34□□□□□ -0.43
SDC2-203ENST00000519587 EXOGQ9Y2C4 368 aaKnown RBP12.34□□□□□ -0.43
SDC2-203ENST00000519587 ABCA12Q86UK0 2595 aa12.34□□□□□ -0.43
SDC2-203ENST00000519587 DAPL1A0PJW8 107 aa12.33□□□□□ -0.44
SDC2-203ENST00000519587 ZNF878C9JN71 531 aa12.33□□□□□ -0.44
SDC2-203ENST00000519587 MMP7P09237 267 aaPredicted RBP12.33□□□□□ -0.44
SDC2-203ENST00000519587 CBR1P16152 277 aa12.33□□□□□ -0.44
SDC2-203ENST00000519587 GRNP28799 593 aaKnown RBP12.33□□□□□ -0.44
SDC2-203ENST00000519587 SLC15A1P46059 708 aa12.33□□□□□ -0.44
SDC2-203ENST00000519587 ACTA2P62736 377 aa12.33□□□□□ -0.44
SDC2-203ENST00000519587 ACTG2P63267 376 aa12.33□□□□□ -0.44
SDC2-203ENST00000519587 TUBA1BP68363 451 aa12.33□□□□□ -0.44
SDC2-203ENST00000519587 TUBA4AP68366 448 aa12.33□□□□□ -0.44
SDC2-203ENST00000519587 PIGFQ07326 219 aa12.33□□□□□ -0.44
SDC2-203ENST00000519587 TAF13Q15543 124 aa12.33□□□□□ -0.44
SDC2-203ENST00000519587 C3orf36Q3SXR2 165 aa12.33□□□□□ -0.44
SDC2-203ENST00000519587 PABPC1L2AQ5JQF8 200 aa12.33□□□□□ -0.44
SDC2-203ENST00000519587 ELFN2Q5R3F8 820 aa12.33□□□□□ -0.44
SDC2-203ENST00000519587 OTPQ5XKR4 325 aa12.33□□□□□ -0.44
SDC2-203ENST00000519587 LAIR2Q6ISS4 152 aa12.33□□□□□ -0.44
SDC2-203ENST00000519587 CORO6Q6QEF8 472 aa12.33□□□□□ -0.44
SDC2-203ENST00000519587 TUBA1AQ71U36 451 aa12.33□□□□□ -0.44
SDC2-203ENST00000519587 OR4F15Q8NGB8 312 aa12.33□□□□□ -0.44
SDC2-203ENST00000519587 OR52I1Q8NGK6 324 aa12.33□□□□□ -0.44
SDC2-203ENST00000519587 THEM6Q8WUY1 208 aa12.33□□□□□ -0.44
SDC2-203ENST00000519587 TMEM80Q96HE8 168 aa12.33□□□□□ -0.44
SDC2-203ENST00000519587 DACH2Q96NX9 599 aa12.33□□□□□ -0.44
SDC2-203ENST00000519587 KCNS3Q9BQ31 491 aa12.33□□□□□ -0.44
SDC2-203ENST00000519587 ABHD6Q9BV23 337 aa12.33□□□□□ -0.44
SDC2-203ENST00000519587 FGF20Q9NP95 211 aaPredicted RBP12.33□□□□□ -0.44
SDC2-203ENST00000519587 B3GNT2Q9NY97 397 aa12.33□□□□□ -0.44
SDC2-203ENST00000519587 UBAP1Q9NZ09 502 aa12.33□□□□□ -0.44
SDC2-203ENST00000519587 ZNF224Q9NZL3 707 aa12.33□□□□□ -0.44
SDC2-203ENST00000519587 DIMT1Q9UNQ2 313 aaKnown RBP12.33□□□□□ -0.44
SDC2-203ENST00000519587 MYRFQ9Y2G1 1151 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms