RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 PRSS57Q6UWY2 283 aa18.96■□□□□ 0.63
VEGFA-217ENST00000518538 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.96■□□□□ 0.63
VEGFA-217ENST00000518538 OR10H5Q8NGA6 315 aa18.96■□□□□ 0.63
VEGFA-217ENST00000518538 OR9Q1Q8NGQ5 310 aa18.96■□□□□ 0.63
VEGFA-217ENST00000518538 SLC25A19Q9HC21 320 aa18.96■□□□□ 0.63
VEGFA-217ENST00000518538 NDRG4Q9ULP0 352 aaKnown RBP18.96■□□□□ 0.63
VEGFA-217ENST00000518538 CMAHPQ9Y471 501 aa18.96■□□□□ 0.63
VEGFA-217ENST00000518538 PRRC2AP48634 2157 aaKnown RBP18.96■□□□□ 0.63
VEGFA-217ENST00000518538 C5orf49A4QMS7 147 aa18.95■□□□□ 0.62
VEGFA-217ENST00000518538 H7C417 338 aa18.95■□□□□ 0.62
VEGFA-217ENST00000518538 HMGN1P05114 100 aa18.95■□□□□ 0.62
VEGFA-217ENST00000518538 FAM157BP0CG42 384 aa18.95■□□□□ 0.62
VEGFA-217ENST00000518538 CCNOP22674 350 aa18.95■□□□□ 0.62
VEGFA-217ENST00000518538 RAD52P43351 418 aa18.95■□□□□ 0.62
VEGFA-217ENST00000518538 CRISP1P54107 249 aa18.95■□□□□ 0.62
VEGFA-217ENST00000518538 SNRPD2P62316 118 aaKnown RBP18.95■□□□□ 0.62
VEGFA-217ENST00000518538 ADAM8P78325 824 aa18.95■□□□□ 0.62
VEGFA-217ENST00000518538 KDM4DQ6B0I6 523 aa18.95■□□□□ 0.62
VEGFA-217ENST00000518538 VASH1Q7L8A9 365 aaPredicted RBP18.95■□□□□ 0.62
VEGFA-217ENST00000518538 MRPL24Q96A35 216 aaKnown RBP18.95■□□□□ 0.62
VEGFA-217ENST00000518538 PKP2Q99959 881 aa18.95■□□□□ 0.62
VEGFA-217ENST00000518538 TEX12Q9BXU0 123 aa18.95■□□□□ 0.62
VEGFA-217ENST00000518538 BCL2L14Q9BZR8 327 aa18.95■□□□□ 0.62
VEGFA-217ENST00000518538 PLK3Q9H4B4 646 aa18.95■□□□□ 0.62
VEGFA-217ENST00000518538 KRT84Q9NSB2 600 aa18.95■□□□□ 0.62
VEGFA-217ENST00000518538 PLEK2Q9NYT0 353 aa18.95■□□□□ 0.62
VEGFA-217ENST00000518538 KCNG2Q9UJ96 466 aa18.95■□□□□ 0.62
VEGFA-217ENST00000518538 OAZ3Q9UMX2 235 aa18.95■□□□□ 0.62
VEGFA-217ENST00000518538 LHFPL6Q9Y693 200 aa18.95■□□□□ 0.62
VEGFA-217ENST00000518538 PMF1-BGLAPU3KQ54 211 aa18.95■□□□□ 0.62
VEGFA-217ENST00000518538 RER1O15258 196 aa18.94■□□□□ 0.62
VEGFA-217ENST00000518538 SURF4O15260 269 aa18.94■□□□□ 0.62
VEGFA-217ENST00000518538 SPI1P17947 270 aa18.94■□□□□ 0.62
VEGFA-217ENST00000518538 UCP2P55851 309 aa18.94■□□□□ 0.62
VEGFA-217ENST00000518538 ESRRGP62508 458 aa18.94■□□□□ 0.62
VEGFA-217ENST00000518538 HIST1H3AP68431 136 aa18.94■□□□□ 0.62
VEGFA-217ENST00000518538 MSMPQ1L6U9 139 aa18.94■□□□□ 0.62
VEGFA-217ENST00000518538 CCDC92Q53HC0 331 aaPredicted RBP18.94■□□□□ 0.62
VEGFA-217ENST00000518538 HIST2H3PS2Q5TEC6 136 aa18.94■□□□□ 0.62
VEGFA-217ENST00000518538 HIST2H3AQ71DI3 136 aa18.94■□□□□ 0.62
VEGFA-217ENST00000518538 ICA1LQ8NDH6 482 aa18.94■□□□□ 0.62
VEGFA-217ENST00000518538 GJC3Q8NFK1 279 aa18.94■□□□□ 0.62
VEGFA-217ENST00000518538 ZNRF4Q8WWF5 429 aa18.94■□□□□ 0.62
VEGFA-217ENST00000518538 MRPL22Q9NWU5 206 aaKnown RBP18.94■□□□□ 0.62
VEGFA-217ENST00000518538 EIF3KQ9UBQ5 218 aaKnown RBP18.94■□□□□ 0.62
VEGFA-217ENST00000518538 ATPIF1Q9UII2 106 aa18.94■□□□□ 0.62
VEGFA-217ENST00000518538 FBXO9Q9UK97 447 aaPredicted RBP18.94■□□□□ 0.62
VEGFA-217ENST00000518538 SYNGR3O43761 229 aa18.93■□□□□ 0.62
VEGFA-217ENST00000518538 MITFO75030 526 aaPredicted RBP18.93■□□□□ 0.62
VEGFA-217ENST00000518538 GYPBP06028 91 aa18.93■□□□□ 0.62
VEGFA-217ENST00000518538 CLUP10909 449 aa18.93■□□□□ 0.62
VEGFA-217ENST00000518538 PAICSP22234 425 aaKnown RBP18.93■□□□□ 0.62
VEGFA-217ENST00000518538 GGT2P36268 569 aa18.93■□□□□ 0.62
VEGFA-217ENST00000518538 HTR5AP47898 357 aa18.93■□□□□ 0.62
VEGFA-217ENST00000518538 GABPB1Q06547 395 aaPredicted RBP18.93■□□□□ 0.62
VEGFA-217ENST00000518538 RAB35Q15286 201 aa18.93■□□□□ 0.62
VEGFA-217ENST00000518538 TMEM236Q5W0B7 351 aa18.93■□□□□ 0.62
VEGFA-217ENST00000518538 RGS7BPQ6MZT1 257 aaPredicted RBP18.93■□□□□ 0.62
VEGFA-217ENST00000518538 UNQ6126/PRO20091Q6UXV3 157 aa18.93■□□□□ 0.62
VEGFA-217ENST00000518538 TGIF2LYQ8IUE0 185 aa18.93■□□□□ 0.62
VEGFA-217ENST00000518538 WFDC11Q8NEX6 87 aa18.93■□□□□ 0.62
VEGFA-217ENST00000518538 OR51L1Q8NGJ5 315 aa18.93■□□□□ 0.62
VEGFA-217ENST00000518538 CDADC1Q9BWV3 514 aa18.93■□□□□ 0.62
VEGFA-217ENST00000518538 OSBPL10Q9BXB5 764 aa18.93■□□□□ 0.62
VEGFA-217ENST00000518538 OR51B6Q9H340 312 aa18.93■□□□□ 0.62
VEGFA-217ENST00000518538 BARX1Q9HBU1 254 aaPredicted RBP18.93■□□□□ 0.62
VEGFA-217ENST00000518538 ENOPH1Q9UHY7 261 aa18.93■□□□□ 0.62
VEGFA-217ENST00000518538 TMEM129A0AVI4 362 aa18.92■□□□□ 0.62
VEGFA-217ENST00000518538 OR6C6A6NF89 314 aa18.92■□□□□ 0.62
VEGFA-217ENST00000518538 SAC3D1A6NKF1 404 aa18.92■□□□□ 0.62
VEGFA-217ENST00000518538 FAM183AA6NL82 134 aa18.92■□□□□ 0.62
VEGFA-217ENST00000518538 ICMTO60725 284 aa18.92■□□□□ 0.62
VEGFA-217ENST00000518538 IGHV4-39P01824 125 aa18.92■□□□□ 0.62
VEGFA-217ENST00000518538 ZNF823P16415 610 aa18.92■□□□□ 0.62
VEGFA-217ENST00000518538 FMO3P31513 532 aa18.92■□□□□ 0.62
VEGFA-217ENST00000518538 WNT5AP41221 380 aa18.92■□□□□ 0.62
VEGFA-217ENST00000518538 EVX1P49640 407 aa18.92■□□□□ 0.62
VEGFA-217ENST00000518538 BLVRAP53004 296 aa18.92■□□□□ 0.62
VEGFA-217ENST00000518538 PPP2R2BQ00005 443 aa18.92■□□□□ 0.62
VEGFA-217ENST00000518538 PTGES3Q15185 160 aaKnown RBP18.92■□□□□ 0.62
VEGFA-217ENST00000518538 SLC18B1Q6NT16 456 aa18.92■□□□□ 0.62
VEGFA-217ENST00000518538 CORO6Q6QEF8 472 aa18.92■□□□□ 0.62
VEGFA-217ENST00000518538 OR2AJ1Q8NGZ0 328 aa18.92■□□□□ 0.62
VEGFA-217ENST00000518538 OR1F12Q8NHA8 337 aa18.92■□□□□ 0.62
VEGFA-217ENST00000518538 DOK1Q99704 481 aa18.92■□□□□ 0.62
VEGFA-217ENST00000518538 HCAR1Q9BXC0 346 aa18.92■□□□□ 0.62
VEGFA-217ENST00000518538 MRPL37Q9BZE1 423 aaKnown RBP18.92■□□□□ 0.62
VEGFA-217ENST00000518538 MED20Q9H944 212 aa18.92■□□□□ 0.62
VEGFA-217ENST00000518538 S100A14Q9HCY8 104 aa18.92■□□□□ 0.62
VEGFA-217ENST00000518538 CYB5R1Q9UHQ9 305 aa18.92■□□□□ 0.62
VEGFA-217ENST00000518538 TMEFF2Q9UIK5 374 aaPredicted RBP18.92■□□□□ 0.62
VEGFA-217ENST00000518538 GDF2Q9UK05 429 aaPredicted RBP18.92■□□□□ 0.62
VEGFA-217ENST00000518538 USF3Q68DE3 2245 aa18.91■□□□□ 0.62
VEGFA-217ENST00000518538 TVP23AA6NH52 213 aa18.91■□□□□ 0.62
VEGFA-217ENST00000518538 PRR23D1E9PI22 279 aaPredicted RBP18.91■□□□□ 0.62
VEGFA-217ENST00000518538 NDUFS7O75251 213 aa18.91■□□□□ 0.62
VEGFA-217ENST00000518538 LCKP06239 509 aa18.91■□□□□ 0.62
VEGFA-217ENST00000518538 PRR23D2P0DMB1 279 aaPredicted RBP18.91■□□□□ 0.62
VEGFA-217ENST00000518538 IGFBP5P24593 272 aa18.91■□□□□ 0.62
VEGFA-217ENST00000518538 PPOXP50336 477 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms