RNA–Protein interactions for RNA: ENST00000516428.1

RNU4-54P-201, Transcript of RNA, U4 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU4-54P, Length 129 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-54P-201ENST00000516428 NT5DC3Q86UY8 548 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 ZFAND4Q86XD8 727 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 TMEM25Q86YD3 366 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 HIPK1Q86Z02 1210 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 ZNF547Q8IVP9 402 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 GID4Q8IVV7 300 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 BBS7Q8IWZ6 715 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 ODF3L1Q8IXM7 274 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 C10orf67Q8IYJ2 551 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 BOD1L2Q8IYS8 172 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 ENTHD1Q8IYW4 607 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 PRR22Q8IZ63 422 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 MCOLN2Q8IZK6 566 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 HS3ST5Q8IZT8 346 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 VKORC1L1Q8N0U8 176 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 PGAM4Q8N0Y7 254 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 PDIK1LQ8N165 341 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 CA13Q8N1Q1 262 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 LINC01561Q8N1V8 128 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 ABHD12Q8N2K0 398 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR2L13Q8N349 312 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 ZNF786Q8N393 782 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 Q8N402 240 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 STPG2Q8N412 459 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 FTMTQ8N4E7 242 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 RAB42Q8N4Z0 105 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 MREGQ8N565 214 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 TBC1D19Q8N5T2 526 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 TRAM1L1Q8N609 369 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 TMEM156Q8N614 296 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 EID2Q8N6I1 236 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 TMEM251Q8N6I4 163 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 SAMD12Q8N8I0 201 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 PRELID2Q8N945 189 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 CCDC71LQ8N9Z2 235 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 ZNF383Q8NA42 475 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 NEXN-AS1Q8NBZ9 246 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 CATSPER1Q8NEC5 780 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 DUSP18Q8NEJ0 188 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 CCDC54Q8NEL0 328 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 ZNF680Q8NEM1 530 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 KLHDC9Q8NEP7 349 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 LFNGQ8NES3 379 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 ATP6V1C2Q8NEY4 427 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 VN1R2Q8NFZ6 395 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR1M1Q8NGA1 313 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR4K2Q8NGD2 314 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR9Q2Q8NGE9 314 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR5B17Q8NGF7 314 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR5L2Q8NGL0 311 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR5D18Q8NGL1 313 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR10G8Q8NGN5 311 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR5M1Q8NGP8 315 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR6Q1Q8NGQ2 317 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR1B1Q8NGR6 318 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR9A4Q8NGU2 314 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR2G2Q8NGZ5 317 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR51F2Q8NH61 342 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR6X1Q8NH79 312 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR5K2Q8NHB8 316 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 CT45A3Q8NHU0 189 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 LNX1Q8TBB1 728 aaPredicted RBP0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 PIGXQ8TBF5 258 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 SYNPRQ8TBG9 265 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 ZNF502Q8TBZ5 544 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 TEX47Q8TBZ9 253 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 FNDC8Q8TC99 324 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 FAM45AQ8TCE6 357 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 SPPL2AQ8TCT8 520 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 SLC7A13Q8TCU3 470 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 ZPLD1Q8TCW7 415 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 MAPK15Q8TD08 544 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 MCOLN3Q8TDD5 553 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 RNASEH2CQ8TDP1 164 aaKnown RBP0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 TBCKQ8TEA7 893 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 CASTOR1Q8WTX7 329 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 GATAD1Q8WUU5 269 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 RNF138Q8WVD3 245 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 DYDC1Q8WWB3 177 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 DNAJB3Q8WWF6 145 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 IGFBPL1Q8WX77 278 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 PYDC1Q8WXC3 89 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 BAALCQ8WXS3 180 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR8D1Q8WZ84 308 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 TFGQ92734 400 aaPredicted RBP0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 RASL10AQ92737 203 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 HGDQ93099 445 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 PTH2Q96A98 100 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 NTNG2Q96CW9 530 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 SMIM19Q96E16 107 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 RAB3CQ96E17 227 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 SGTBQ96EQ0 304 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 TMA16Q96EY4 203 aaKnown RBP0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 PAGE5Q96GU1 130 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 TMEM80Q96HE8 168 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 POM121L2Q96KW2 1035 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 B3GALT6Q96L58 329 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 CEP19Q96LK0 163 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 C2orf48Q96LS8 159 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 CCDC42Q96M95 316 aa0.48□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms