RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 THBDP07204 575 aa18.29■□□□□ 0.52
LSM6-207ENST00000515311 CCDC159P0C7I6 412 aa18.29■□□□□ 0.52
LSM6-207ENST00000515311 PATE4P0C8F1 98 aa18.29■□□□□ 0.52
LSM6-207ENST00000515311 CBR1P16152 277 aa18.29■□□□□ 0.52
LSM6-207ENST00000515311 PIGFQ07326 219 aa18.29■□□□□ 0.52
LSM6-207ENST00000515311 C3orf36Q3SXR2 165 aa18.29■□□□□ 0.52
LSM6-207ENST00000515311 CORO6Q6QEF8 472 aa18.29■□□□□ 0.52
LSM6-207ENST00000515311 SEZ6L2Q6UXD5 910 aa18.29■□□□□ 0.52
LSM6-207ENST00000515311 C22orf34Q6ZV56 151 aa18.29■□□□□ 0.52
LSM6-207ENST00000515311 LINC00346Q8IVM7 164 aa18.29■□□□□ 0.52
LSM6-207ENST00000515311 SLC35F2Q8IXU6 374 aa18.29■□□□□ 0.52
LSM6-207ENST00000515311 ACBD4Q8NC06 268 aa18.29■□□□□ 0.52
LSM6-207ENST00000515311 LGALS12Q96DT0 336 aa18.29■□□□□ 0.52
LSM6-207ENST00000515311 DACH2Q96NX9 599 aa18.29■□□□□ 0.52
LSM6-207ENST00000515311 RNF121Q9H920 327 aa18.29■□□□□ 0.52
LSM6-207ENST00000515311 NOX3Q9HBY0 568 aa18.29■□□□□ 0.52
LSM6-207ENST00000515311 CNOT2Q9NZN8 540 aaKnown RBP18.29■□□□□ 0.52
LSM6-207ENST00000515311 CRNNQ9UBG3 495 aaPredicted RBP18.29■□□□□ 0.52
LSM6-207ENST00000515311 GDF2Q9UK05 429 aaPredicted RBP18.29■□□□□ 0.52
LSM6-207ENST00000515311 PCDHGB5Q9Y5G0 923 aa18.29■□□□□ 0.52
LSM6-207ENST00000515311 EFCAB10A6NFE3 127 aa18.28■□□□□ 0.52
LSM6-207ENST00000515311 C19orf84I3L1E1 186 aa18.28■□□□□ 0.52
LSM6-207ENST00000515311 SLC1A7O00341 560 aa18.28■□□□□ 0.52
LSM6-207ENST00000515311 FAM20BO75063 409 aa18.28■□□□□ 0.52
LSM6-207ENST00000515311 FADS2O95864 444 aaKnown RBP18.28■□□□□ 0.52
LSM6-207ENST00000515311 IGKV3-15P01624 115 aa18.28■□□□□ 0.52
LSM6-207ENST00000515311 OR2T7P0C7T2 308 aa18.28■□□□□ 0.52
LSM6-207ENST00000515311 PIPP12273 146 aaPredicted RBP18.28■□□□□ 0.52
LSM6-207ENST00000515311 RPS27P42677 84 aaKnown RBP18.28■□□□□ 0.52
LSM6-207ENST00000515311 ACTC1P68032 377 aa18.28■□□□□ 0.52
LSM6-207ENST00000515311 ACTA1P68133 377 aa18.28■□□□□ 0.52
LSM6-207ENST00000515311 PSG4Q00888 419 aa18.28■□□□□ 0.52
LSM6-207ENST00000515311 CFAP77Q6ZQR2 320 aa18.28■□□□□ 0.52
LSM6-207ENST00000515311 BPIFB6Q8NFQ5 453 aa18.28■□□□□ 0.52
LSM6-207ENST00000515311 OR4F15Q8NGB8 312 aa18.28■□□□□ 0.52
LSM6-207ENST00000515311 OR2T27Q8NH04 317 aa18.28■□□□□ 0.52
LSM6-207ENST00000515311 ST7LQ8TDW4 575 aa18.28■□□□□ 0.52
LSM6-207ENST00000515311 MAP6Q96JE9 813 aa18.28■□□□□ 0.52
LSM6-207ENST00000515311 ZNF75AQ96N20 296 aa18.28■□□□□ 0.52
LSM6-207ENST00000515311 C1orf198Q9H425 327 aa18.28■□□□□ 0.52
LSM6-207ENST00000515311 NGBQ9NPG2 151 aa18.28■□□□□ 0.52
LSM6-207ENST00000515311 PSORS1C1Q9UIG5 152 aa18.28■□□□□ 0.52
LSM6-207ENST00000515311 RER1O15258 196 aa18.27■□□□□ 0.52
LSM6-207ENST00000515311 SGCEO43556 437 aa18.27■□□□□ 0.52
LSM6-207ENST00000515311 XPNPEP2O43895 674 aa18.27■□□□□ 0.52
LSM6-207ENST00000515311 APOL3O95236 402 aa18.27■□□□□ 0.52
LSM6-207ENST00000515311 IGLV1-44P01699 117 aa18.27■□□□□ 0.52
LSM6-207ENST00000515311 ALOX5APP20292 161 aa18.27■□□□□ 0.52
LSM6-207ENST00000515311 PLP2Q04941 152 aa18.27■□□□□ 0.52
LSM6-207ENST00000515311 EIF2B1Q14232 305 aaKnown RBP18.27■□□□□ 0.52
LSM6-207ENST00000515311 RAB35Q15286 201 aa18.27■□□□□ 0.52
LSM6-207ENST00000515311 PABPC1L2AQ5JQF8 200 aa18.27■□□□□ 0.52
LSM6-207ENST00000515311 RBM48Q5RL73 367 aaKnown RBP18.27■□□□□ 0.52
LSM6-207ENST00000515311 RHOUQ7L0Q8 258 aa18.27■□□□□ 0.52
LSM6-207ENST00000515311 DCXRQ7Z4W1 244 aa18.27■□□□□ 0.52
LSM6-207ENST00000515311 DMRTC2Q8IXT2 367 aaPredicted RBP18.27■□□□□ 0.52
LSM6-207ENST00000515311 ALDH16A1Q8IZ83 802 aa18.27■□□□□ 0.52
LSM6-207ENST00000515311 ZNF786Q8N393 782 aa18.27■□□□□ 0.52
LSM6-207ENST00000515311 ABHD6Q9BV23 337 aa18.27■□□□□ 0.52
LSM6-207ENST00000515311 HDHD2Q9H0R4 259 aa18.27■□□□□ 0.52
LSM6-207ENST00000515311 WNT5BQ9H1J7 359 aa18.27■□□□□ 0.52
LSM6-207ENST00000515311 SLC24A3Q9HC58 644 aa18.27■□□□□ 0.52
LSM6-207ENST00000515311 FGF20Q9NP95 211 aaPredicted RBP18.27■□□□□ 0.52
LSM6-207ENST00000515311 FKBP14Q9NWM8 211 aa18.27■□□□□ 0.52
LSM6-207ENST00000515311 SCN3BQ9NY72 215 aa18.27■□□□□ 0.52
LSM6-207ENST00000515311 ATPIF1Q9UII2 106 aa18.27■□□□□ 0.52
LSM6-207ENST00000515311 LAMP5Q9UJQ1 280 aa18.27■□□□□ 0.52
LSM6-207ENST00000515311 LRCH1Q9Y2L9 728 aa18.27■□□□□ 0.52
LSM6-207ENST00000515311 COL12A1Q99715 3063 aa18.26■□□□□ 0.51
LSM6-207ENST00000515311 PRSS44E7EML9 344 aa18.26■□□□□ 0.51
LSM6-207ENST00000515311 PHYHO14832 338 aa18.26■□□□□ 0.51
LSM6-207ENST00000515311 PTHP01270 115 aa18.26■□□□□ 0.51
LSM6-207ENST00000515311 IGHA1P01876 353 aa18.26■□□□□ 0.51
LSM6-207ENST00000515311 SERPINA5P05154 406 aa18.26■□□□□ 0.51
LSM6-207ENST00000515311 LYNP07948 512 aa18.26■□□□□ 0.51
LSM6-207ENST00000515311 COX5BP10606 129 aa18.26■□□□□ 0.51
LSM6-207ENST00000515311 ZNF14P17017 642 aaPredicted RBP18.26■□□□□ 0.51
LSM6-207ENST00000515311 KIR2DL3P43628 341 aa18.26■□□□□ 0.51
LSM6-207ENST00000515311 CCDC92Q53HC0 331 aaPredicted RBP18.26■□□□□ 0.51
LSM6-207ENST00000515311 ELFN2Q5R3F8 820 aa18.26■□□□□ 0.51
LSM6-207ENST00000515311 VASH1Q7L8A9 365 aaPredicted RBP18.26■□□□□ 0.51
LSM6-207ENST00000515311 ACBD7Q8N6N7 88 aa18.26■□□□□ 0.51
LSM6-207ENST00000515311 OR10H4Q8NGA5 316 aa18.26■□□□□ 0.51
LSM6-207ENST00000515311 OR52I1Q8NGK6 324 aa18.26■□□□□ 0.51
LSM6-207ENST00000515311 LINC01560Q8TB33 94 aa18.26■□□□□ 0.51
LSM6-207ENST00000515311 SMAP2Q8WU79 429 aaPredicted RBP18.26■□□□□ 0.51
LSM6-207ENST00000515311 ASB17Q8WXJ9 295 aa18.26■□□□□ 0.51
LSM6-207ENST00000515311 GGHQ92820 318 aa18.26■□□□□ 0.51
LSM6-207ENST00000515311 JAM3Q9BX67 310 aa18.26■□□□□ 0.51
LSM6-207ENST00000515311 PNRC2Q9NPJ4 139 aaKnown RBP18.26■□□□□ 0.51
LSM6-207ENST00000515311 INPP5EQ9NRR6 644 aa18.26■□□□□ 0.51
LSM6-207ENST00000515311 PLEK2Q9NYT0 353 aa18.26■□□□□ 0.51
LSM6-207ENST00000515311 KLHDC2Q9Y2U9 406 aa18.26■□□□□ 0.51
LSM6-207ENST00000515311 TPRKBQ9Y3C4 175 aa18.26■□□□□ 0.51
LSM6-207ENST00000515311 SPTAN1Q13813 2472 aaKnown RBP18.25■□□□□ 0.51
LSM6-207ENST00000515311 IQCMA0A1B0GVH7 501 aa18.25■□□□□ 0.51
LSM6-207ENST00000515311 OR6C6A6NF89 314 aa18.25■□□□□ 0.51
LSM6-207ENST00000515311 ZNF670-ZNF695F2Z2N8 137 aa18.25■□□□□ 0.51
LSM6-207ENST00000515311 SYNGR3O43761 229 aa18.25■□□□□ 0.51
LSM6-207ENST00000515311 DOK2O60496 412 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms