RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 TMEM120AQ9BXJ8 343 aa7.85□□□□□ -1.15
NEDD9-211ENST00000508546 WDR55Q9H6Y2 383 aaPredicted RBP7.85□□□□□ -1.15
NEDD9-211ENST00000508546 MARCH7Q9H992 704 aa7.85□□□□□ -1.15
NEDD9-211ENST00000508546 SMURF2Q9HAU4 748 aa7.85□□□□□ -1.15
NEDD9-211ENST00000508546 SDR39U1Q9NRG7 319 aaPredicted RBP7.85□□□□□ -1.15
NEDD9-211ENST00000508546 MAN2C1Q9NTJ4 1040 aa7.85□□□□□ -1.15
NEDD9-211ENST00000508546 MIOXQ9UGB7 285 aa7.85□□□□□ -1.15
NEDD9-211ENST00000508546 ZNF229Q9UJW7 825 aa7.85□□□□□ -1.15
NEDD9-211ENST00000508546 PPP1R3CQ9UQK1 317 aa7.85□□□□□ -1.15
NEDD9-211ENST00000508546 TRPC5OSA6NMA1 111 aa7.84□□□□□ -1.15
NEDD9-211ENST00000508546 SURF4O15260 269 aa7.84□□□□□ -1.15
NEDD9-211ENST00000508546 HDAC3O15379 428 aa7.84□□□□□ -1.15
NEDD9-211ENST00000508546 SERPINB7O75635 380 aa7.84□□□□□ -1.15
NEDD9-211ENST00000508546 TRMUO75648 421 aaKnown RBP7.84□□□□□ -1.15
NEDD9-211ENST00000508546 DCTN3O75935 186 aa7.84□□□□□ -1.15
NEDD9-211ENST00000508546 FSTL3O95633 263 aa7.84□□□□□ -1.15
NEDD9-211ENST00000508546 CH25HO95992 272 aa7.84□□□□□ -1.15
NEDD9-211ENST00000508546 HIST1H2ABP04908 130 aa7.84□□□□□ -1.15
NEDD9-211ENST00000508546 MELTFP08582 738 aa7.84□□□□□ -1.15
NEDD9-211ENST00000508546 ACADSP16219 412 aa7.84□□□□□ -1.15
NEDD9-211ENST00000508546 KITLGP21583 273 aa7.84□□□□□ -1.15
NEDD9-211ENST00000508546 TUBG1P23258 451 aa7.84□□□□□ -1.15
NEDD9-211ENST00000508546 POLR2JP52435 117 aaKnown RBP7.84□□□□□ -1.15
NEDD9-211ENST00000508546 ARHGDIAP52565 204 aa7.84□□□□□ -1.15
NEDD9-211ENST00000508546 GNB2P62879 340 aa7.84□□□□□ -1.15
NEDD9-211ENST00000508546 GCNT6Q5T4J0 391 aa7.84□□□□□ -1.15
NEDD9-211ENST00000508546 GPR157Q5UAW9 335 aa7.84□□□□□ -1.15
NEDD9-211ENST00000508546 FAM27BQ5VT28 67 aa7.84□□□□□ -1.15
NEDD9-211ENST00000508546 Q6ZR03 302 aa7.84□□□□□ -1.15
NEDD9-211ENST00000508546 CCDC121Q6ZUS5 278 aa7.84□□□□□ -1.15
NEDD9-211ENST00000508546 HIST3H2AQ7L7L0 130 aa7.84□□□□□ -1.15
NEDD9-211ENST00000508546 TRPM8Q7Z2W7 1104 aa7.84□□□□□ -1.15
NEDD9-211ENST00000508546 KLBQ86Z14 1044 aa7.84□□□□□ -1.15
NEDD9-211ENST00000508546 ALDH16A1Q8IZ83 802 aa7.84□□□□□ -1.15
NEDD9-211ENST00000508546 OR2Z1Q8NG97 314 aa7.84□□□□□ -1.15
NEDD9-211ENST00000508546 AKR7LQ8NHP1 331 aa7.84□□□□□ -1.15
NEDD9-211ENST00000508546 LINC01006Q8NI28 216 aa7.84□□□□□ -1.15
NEDD9-211ENST00000508546 ITLN1Q8WWA0 313 aa7.84□□□□□ -1.15
NEDD9-211ENST00000508546 SSMEM1Q8WWF3 244 aa7.84□□□□□ -1.15
NEDD9-211ENST00000508546 ASB10Q8WXI3 467 aa7.84□□□□□ -1.15
NEDD9-211ENST00000508546 DYRK2Q92630 601 aa7.84□□□□□ -1.15
NEDD9-211ENST00000508546 HIST1H2ACQ93077 130 aa7.84□□□□□ -1.15
NEDD9-211ENST00000508546 NMD3Q96D46 503 aaKnown RBP7.84□□□□□ -1.15
NEDD9-211ENST00000508546 MAELQ96JY0 434 aaKnown RBP7.84□□□□□ -1.15
NEDD9-211ENST00000508546 C4orf45Q96LM5 186 aa7.84□□□□□ -1.15
NEDD9-211ENST00000508546 ZNF607Q96SK3 696 aa7.84□□□□□ -1.15
NEDD9-211ENST00000508546 MCHR1Q99705 422 aa7.84□□□□□ -1.15
NEDD9-211ENST00000508546 ZNF426Q9BUY5 554 aa7.84□□□□□ -1.15
NEDD9-211ENST00000508546 TMEM38AQ9H6F2 299 aa7.84□□□□□ -1.15
NEDD9-211ENST00000508546 TUBG2Q9NRH3 451 aa7.84□□□□□ -1.15
NEDD9-211ENST00000508546 STX18Q9P2W9 335 aaKnown RBP7.84□□□□□ -1.15
NEDD9-211ENST00000508546 ASH2LQ9UBL3 628 aa7.84□□□□□ -1.15
NEDD9-211ENST00000508546 SLC13A4Q9UKG4 626 aa7.84□□□□□ -1.15
NEDD9-211ENST00000508546 UGT2A1Q9Y4X1 527 aa7.84□□□□□ -1.15
NEDD9-211ENST00000508546 GMEB1Q9Y692 573 aa7.84□□□□□ -1.15
NEDD9-211ENST00000508546 SACSQ9NZJ4 4579 aa7.84□□□□□ -1.15
NEDD9-211ENST00000508546 A0A1W2PRG6 482 aa7.83□□□□□ -1.16
NEDD9-211ENST00000508546 C5orf63A6NC05 138 aa7.83□□□□□ -1.16
NEDD9-211ENST00000508546 MCIDASD6RGH6 385 aa7.83□□□□□ -1.16
NEDD9-211ENST00000508546 TNFRSF13BO14836 293 aaPredicted RBP7.83□□□□□ -1.16
NEDD9-211ENST00000508546 LYPD3O95274 346 aa7.83□□□□□ -1.16
NEDD9-211ENST00000508546 RPS2P15880 293 aaKnown RBP7.83□□□□□ -1.16
NEDD9-211ENST00000508546 GSTM3P21266 225 aa7.83□□□□□ -1.16
NEDD9-211ENST00000508546 PPIBP23284 216 aaKnown RBP7.83□□□□□ -1.16
NEDD9-211ENST00000508546 CDAP32320 146 aa7.83□□□□□ -1.16
NEDD9-211ENST00000508546 DAP3P51398 398 aaKnown RBP7.83□□□□□ -1.16
NEDD9-211ENST00000508546 MMP16P51512 607 aa7.83□□□□□ -1.16
NEDD9-211ENST00000508546 ERVK-25P63136 954 aa7.83□□□□□ -1.16
NEDD9-211ENST00000508546 TAF11Q15544 211 aa7.83□□□□□ -1.16
NEDD9-211ENST00000508546 C2orf68Q2NKX9 166 aa7.83□□□□□ -1.16
NEDD9-211ENST00000508546 LRIF1Q5T3J3 769 aa7.83□□□□□ -1.16
NEDD9-211ENST00000508546 KPRPQ5T749 579 aaPredicted RBP7.83□□□□□ -1.16
NEDD9-211ENST00000508546 SLC27A4Q6P1M0 643 aa7.83□□□□□ -1.16
NEDD9-211ENST00000508546 TTC33Q6PID6 262 aaPredicted RBP7.83□□□□□ -1.16
NEDD9-211ENST00000508546 ARL9Q6T311 187 aa7.83□□□□□ -1.16
NEDD9-211ENST00000508546 REC114Q7Z4M0 266 aa7.83□□□□□ -1.16
NEDD9-211ENST00000508546 NANOGNBQ7Z5D8 188 aa7.83□□□□□ -1.16
NEDD9-211ENST00000508546 ARMC8Q8IUR7 673 aa7.83□□□□□ -1.16
NEDD9-211ENST00000508546 C10orf111Q8N326 155 aa7.83□□□□□ -1.16
NEDD9-211ENST00000508546 FITM2Q8N6M3 262 aa7.83□□□□□ -1.16
NEDD9-211ENST00000508546 NPEPL1Q8NDH3 523 aa7.83□□□□□ -1.16
NEDD9-211ENST00000508546 OR9I1Q8NGQ6 314 aa7.83□□□□□ -1.16
NEDD9-211ENST00000508546 NEIL1Q96FI4 390 aaPredicted RBP7.83□□□□□ -1.16
NEDD9-211ENST00000508546 MPP4Q96JB8 637 aa7.83□□□□□ -1.16
NEDD9-211ENST00000508546 OR2V2Q96R30 315 aa7.83□□□□□ -1.16
NEDD9-211ENST00000508546 NUDT16L1Q9BRJ7 211 aaKnown RBP7.83□□□□□ -1.16
NEDD9-211ENST00000508546 OR2H1Q9GZK4 316 aa7.83□□□□□ -1.16
NEDD9-211ENST00000508546 WNT5BQ9H1J7 359 aa7.83□□□□□ -1.16
NEDD9-211ENST00000508546 TMEM165Q9HC07 324 aa7.83□□□□□ -1.16
NEDD9-211ENST00000508546 TCF7L1Q9HCS4 588 aa7.83□□□□□ -1.16
NEDD9-211ENST00000508546 GCM1Q9NP62 436 aa7.83□□□□□ -1.16
NEDD9-211ENST00000508546 TNFRSF19Q9NS68 423 aa7.83□□□□□ -1.16
NEDD9-211ENST00000508546 TBCCD1Q9NVR7 557 aa7.83□□□□□ -1.16
NEDD9-211ENST00000508546 SLC25A37Q9NYZ2 338 aa7.83□□□□□ -1.16
NEDD9-211ENST00000508546 DNAH3Q8TD57 4116 aa7.82□□□□□ -1.16
NEDD9-211ENST00000508546 IGKV1D-43A0A0B4J1Z2 117 aa7.82□□□□□ -1.16
NEDD9-211ENST00000508546 NPIPB13A6NJU9 1138 aa7.82□□□□□ -1.16
NEDD9-211ENST00000508546 NPIPB4C9JG80 1138 aa7.82□□□□□ -1.16
NEDD9-211ENST00000508546 G3V4G9 280 aa7.82□□□□□ -1.16
NEDD9-211ENST00000508546 BLOC1S5-TXNDC5H3BN57 136 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms