RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 MRPL40Q9NQ50 206 aaKnown RBP2.77□□□□□ -1.97
TOPBP1-206ENST00000508524 DDX19AQ9NUU7 478 aaKnown RBP2.77□□□□□ -1.97
TOPBP1-206ENST00000508524 HMGXB4Q9UGU5 601 aa2.77□□□□□ -1.97
TOPBP1-206ENST00000508524 LSM7Q9UK45 103 aaKnown RBP2.77□□□□□ -1.97
TOPBP1-206ENST00000508524 SCML1Q9UN30 329 aa2.77□□□□□ -1.97
TOPBP1-206ENST00000508524 BIRC6Q9NR09 4857 aa2.76□□□□□ -1.97
TOPBP1-206ENST00000508524 C11orf94C9JXX5 98 aa2.76□□□□□ -1.97
TOPBP1-206ENST00000508524 KIF2AO00139 706 aaPredicted RBP2.76□□□□□ -1.97
TOPBP1-206ENST00000508524 IGHDP01880 384 aa2.76□□□□□ -1.97
TOPBP1-206ENST00000508524 POLR2EP19388 210 aaKnown RBP2.76□□□□□ -1.97
TOPBP1-206ENST00000508524 CD1CP29017 333 aa2.76□□□□□ -1.97
TOPBP1-206ENST00000508524 BIDP55957 195 aa2.76□□□□□ -1.97
TOPBP1-206ENST00000508524 MAP3K7CLP57077 242 aa2.76□□□□□ -1.97
TOPBP1-206ENST00000508524 RPS24P62847 133 aaKnown RBP2.76□□□□□ -1.97
TOPBP1-206ENST00000508524 AP1B1Q10567 949 aa2.76□□□□□ -1.97
TOPBP1-206ENST00000508524 PSG5Q15238 335 aa2.76□□□□□ -1.97
TOPBP1-206ENST00000508524 C1orf100Q5SVJ3 147 aa2.76□□□□□ -1.97
TOPBP1-206ENST00000508524 NCCRP1Q6ZVX7 275 aaPredicted RBP2.76□□□□□ -1.97
TOPBP1-206ENST00000508524 C16orf62Q7Z3J2 963 aa2.76□□□□□ -1.97
TOPBP1-206ENST00000508524 TMEM17Q86X19 198 aa2.76□□□□□ -1.97
TOPBP1-206ENST00000508524 ZNF695Q8IW36 515 aa2.76□□□□□ -1.97
TOPBP1-206ENST00000508524 CD302Q8IX05 232 aa2.76□□□□□ -1.97
TOPBP1-206ENST00000508524 KDM8Q8N371 416 aa2.76□□□□□ -1.97
TOPBP1-206ENST00000508524 LRRC52Q8N7C0 313 aa2.76□□□□□ -1.97
TOPBP1-206ENST00000508524 ST6GALNAC3Q8NDV1 305 aa2.76□□□□□ -1.97
TOPBP1-206ENST00000508524 FDCSPQ8NFU4 85 aa2.76□□□□□ -1.97
TOPBP1-206ENST00000508524 OR51S1Q8NGJ8 323 aa2.76□□□□□ -1.97
TOPBP1-206ENST00000508524 OR52K2Q8NGK3 314 aa2.76□□□□□ -1.97
TOPBP1-206ENST00000508524 OR56B4Q8NH76 319 aa2.76□□□□□ -1.97
TOPBP1-206ENST00000508524 CCL4L1Q8NHW4 92 aa2.76□□□□□ -1.97
TOPBP1-206ENST00000508524 SELENOMQ8WWX9 145 aa2.76□□□□□ -1.97
TOPBP1-206ENST00000508524 PATE1Q8WXA2 126 aa2.76□□□□□ -1.97
TOPBP1-206ENST00000508524 C14orf79Q96F83 325 aa2.76□□□□□ -1.97
TOPBP1-206ENST00000508524 FOXC2Q99958 501 aa2.76□□□□□ -1.97
TOPBP1-206ENST00000508524 SPATA16Q9BXB7 569 aa2.76□□□□□ -1.97
TOPBP1-206ENST00000508524 OR11A1Q9GZK7 315 aa2.76□□□□□ -1.97
TOPBP1-206ENST00000508524 NAT10Q9H0A0 1025 aaKnown RBP2.76□□□□□ -1.97
TOPBP1-206ENST00000508524 SMYD3Q9H7B4 428 aa2.76□□□□□ -1.97
TOPBP1-206ENST00000508524 DMAP1Q9NPF5 467 aaPredicted RBP2.76□□□□□ -1.97
TOPBP1-206ENST00000508524 SLC39A1Q9NY26 324 aa2.76□□□□□ -1.97
TOPBP1-206ENST00000508524 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.76□□□□□ -1.97
TOPBP1-206ENST00000508524 SUN2Q9UH99 717 aa2.76□□□□□ -1.97
TOPBP1-206ENST00000508524 KIF3AQ9Y496 699 aa2.76□□□□□ -1.97
TOPBP1-206ENST00000508524 TENM3Q9P273 2699 aa2.76□□□□□ -1.97
TOPBP1-206ENST00000508524 NCOA6Q14686 2063 aaPredicted RBP2.76□□□□□ -1.97
TOPBP1-206ENST00000508524 TRPM6Q9BX84 2022 aa2.76□□□□□ -1.97
TOPBP1-206ENST00000508524 KIR2DL5BA0A0G2JN68 375 aa2.75□□□□□ -1.97
TOPBP1-206ENST00000508524 KIR2DL5BA0A0G2JPC4 375 aa2.75□□□□□ -1.97
TOPBP1-206ENST00000508524 GOLGA8IPA6NC78 632 aa2.75□□□□□ -1.97
TOPBP1-206ENST00000508524 ARGFXA6NJG6 315 aa2.75□□□□□ -1.97
TOPBP1-206ENST00000508524 GOLGA8JA6NMD2 632 aa2.75□□□□□ -1.97
TOPBP1-206ENST00000508524 CTDNEP1O95476 244 aa2.75□□□□□ -1.97
TOPBP1-206ENST00000508524 LGI1O95970 557 aa2.75□□□□□ -1.97
TOPBP1-206ENST00000508524 THRAP10827 490 aa2.75□□□□□ -1.97
TOPBP1-206ENST00000508524 CA5AP35218 305 aa2.75□□□□□ -1.97
TOPBP1-206ENST00000508524 CCT6AP40227 531 aaKnown RBP2.75□□□□□ -1.97
TOPBP1-206ENST00000508524 KLK7P49862 253 aa2.75□□□□□ -1.97
TOPBP1-206ENST00000508524 TAS2R19P59542 299 aa2.75□□□□□ -1.97
TOPBP1-206ENST00000508524 PDK1Q15118 436 aa2.75□□□□□ -1.97
TOPBP1-206ENST00000508524 CLEC20AQ6ZU45 233 aa2.75□□□□□ -1.97
TOPBP1-206ENST00000508524 BIVMQ86UB2 503 aa2.75□□□□□ -1.97
TOPBP1-206ENST00000508524 IQCKQ8N0W5 287 aa2.75□□□□□ -1.97
TOPBP1-206ENST00000508524 KIR2DL5AQ8N109 375 aa2.75□□□□□ -1.97
TOPBP1-206ENST00000508524 C12orf29Q8N999 325 aa2.75□□□□□ -1.97
TOPBP1-206ENST00000508524 OR8H1Q8NGG4 311 aa2.75□□□□□ -1.97
TOPBP1-206ENST00000508524 SLC2A14Q8TDB8 520 aa2.75□□□□□ -1.97
TOPBP1-206ENST00000508524 GIMAP1Q8WWP7 306 aa2.75□□□□□ -1.97
TOPBP1-206ENST00000508524 KIAA1143Q96AT1 154 aaPredicted RBP2.75□□□□□ -1.97
TOPBP1-206ENST00000508524 TMEM159Q96B96 161 aa2.75□□□□□ -1.97
TOPBP1-206ENST00000508524 PDXPQ96GD0 296 aa2.75□□□□□ -1.97
TOPBP1-206ENST00000508524 PLIN2Q99541 437 aa2.75□□□□□ -1.97
TOPBP1-206ENST00000508524 ING2Q9H160 280 aa2.75□□□□□ -1.97
TOPBP1-206ENST00000508524 CHMP4BQ9H444 224 aaKnown RBP2.75□□□□□ -1.97
TOPBP1-206ENST00000508524 CSNK1G1Q9HCP0 422 aa2.75□□□□□ -1.97
TOPBP1-206ENST00000508524 FAM49BQ9NUQ9 324 aa2.75□□□□□ -1.97
TOPBP1-206ENST00000508524 SOHLH2Q9NX45 425 aa2.75□□□□□ -1.97
TOPBP1-206ENST00000508524 STOML2Q9UJZ1 356 aa2.75□□□□□ -1.97
TOPBP1-206ENST00000508524 INTS1Q8N201 2190 aaKnown RBP2.74□□□□□ -1.97
TOPBP1-206ENST00000508524 PCLOQ9Y6V0 5065 aa2.74□□□□□ -1.97
TOPBP1-206ENST00000508524 IGHV2-70DA0A0C4DH43 119 aa2.74□□□□□ -1.97
TOPBP1-206ENST00000508524 A0A0U1RQV5 110 aa2.74□□□□□ -1.97
TOPBP1-206ENST00000508524 K7ERQ8 282 aa2.74□□□□□ -1.97
TOPBP1-206ENST00000508524 PRKYO43930 277 aa2.74□□□□□ -1.97
TOPBP1-206ENST00000508524 UGT2B17O75795 530 aa2.74□□□□□ -1.97
TOPBP1-206ENST00000508524 DEXIO95424 95 aa2.74□□□□□ -1.97
TOPBP1-206ENST00000508524 GIPP09681 153 aaPredicted RBP2.74□□□□□ -1.97
TOPBP1-206ENST00000508524 ETS1P14921 441 aa2.74□□□□□ -1.97
TOPBP1-206ENST00000508524 FUT1P19526 365 aa2.74□□□□□ -1.97
TOPBP1-206ENST00000508524 PTGFRP43088 359 aa2.74□□□□□ -1.97
TOPBP1-206ENST00000508524 RABIFP47224 123 aa2.74□□□□□ -1.97
TOPBP1-206ENST00000508524 PRKXP51817 358 aa2.74□□□□□ -1.97
TOPBP1-206ENST00000508524 SELENOTP62341 195 aa2.74□□□□□ -1.97
TOPBP1-206ENST00000508524 TGFBR3Q03167 851 aa2.74□□□□□ -1.97
TOPBP1-206ENST00000508524 ARL6IP1Q15041 203 aa2.74□□□□□ -1.97
TOPBP1-206ENST00000508524 CHRNA6Q15825 494 aa2.74□□□□□ -1.97
TOPBP1-206ENST00000508524 LINC00483Q53H64 154 aa2.74□□□□□ -1.97
TOPBP1-206ENST00000508524 PIGGQ5H8A4 983 aa2.74□□□□□ -1.97
TOPBP1-206ENST00000508524 GALNT17Q6IS24 598 aa2.74□□□□□ -1.97
TOPBP1-206ENST00000508524 ACOT1Q86TX2 421 aa2.74□□□□□ -1.97
TOPBP1-206ENST00000508524 NPBQ8NG41 125 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms