RNA–Protein interactions for RNA: ENST00000504327.1

PDLIM1P4-201, Transcript of PDZ and LIM domain 1 pseudogene 4, humanhuman

BASIC

Gene PDLIM1P4, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P4-201ENST00000504327 TTC33Q6PID6 262 aaPredicted RBP3.56□□□□□ -1.84
PDLIM1P4-201ENST00000504327 GFRALQ6UXV0 394 aa3.56□□□□□ -1.84
PDLIM1P4-201ENST00000504327 Q6ZSR3 168 aa3.56□□□□□ -1.84
PDLIM1P4-201ENST00000504327 SLC25A48Q6ZT89 311 aaKnown RBP3.56□□□□□ -1.84
PDLIM1P4-201ENST00000504327 TMEM219Q86XT9 240 aa3.56□□□□□ -1.84
PDLIM1P4-201ENST00000504327 MTURNQ8N3F0 131 aa3.56□□□□□ -1.84
PDLIM1P4-201ENST00000504327 TPRX1Q8N7U7 411 aa3.56□□□□□ -1.84
PDLIM1P4-201ENST00000504327 ATP6V0D2Q8N8Y2 350 aa3.56□□□□□ -1.84
PDLIM1P4-201ENST00000504327 OR56A4Q8NGH8 313 aa3.56□□□□□ -1.84
PDLIM1P4-201ENST00000504327 OR10V1Q8NGI7 309 aa3.56□□□□□ -1.84
PDLIM1P4-201ENST00000504327 OR2L8Q8NGY9 312 aa3.56□□□□□ -1.84
PDLIM1P4-201ENST00000504327 OR6F1Q8NGZ6 308 aa3.56□□□□□ -1.84
PDLIM1P4-201ENST00000504327 ENKURQ8TC29 256 aa3.56□□□□□ -1.84
PDLIM1P4-201ENST00000504327 TM9SF4Q92544 642 aa3.56□□□□□ -1.84
PDLIM1P4-201ENST00000504327 MRPS31Q92665 395 aaKnown RBP3.56□□□□□ -1.84
PDLIM1P4-201ENST00000504327 PSD2Q9BQI7 771 aa3.56□□□□□ -1.84
PDLIM1P4-201ENST00000504327 ATP13A3Q9H7F0 1226 aa3.56□□□□□ -1.84
PDLIM1P4-201ENST00000504327 WDR54Q9H977 334 aa3.56□□□□□ -1.84
PDLIM1P4-201ENST00000504327 CD274Q9NZQ7 290 aa3.56□□□□□ -1.84
PDLIM1P4-201ENST00000504327 EIF3KQ9UBQ5 218 aaKnown RBP3.56□□□□□ -1.84
PDLIM1P4-201ENST00000504327 APOBEC3BQ9UH17 382 aaKnown RBP3.56□□□□□ -1.84
PDLIM1P4-201ENST00000504327 PRG3Q9Y2Y8 225 aaPredicted RBP3.56□□□□□ -1.84
PDLIM1P4-201ENST00000504327 GPR179Q6PRD1 2367 aa3.56□□□□□ -1.84
PDLIM1P4-201ENST00000504327 FLNBO75369 2602 aaKnown RBP3.56□□□□□ -1.84
PDLIM1P4-201ENST00000504327 WDR87Q6ZQQ6 2873 aa3.55□□□□□ -1.84
PDLIM1P4-201ENST00000504327 DOCK6Q96HP0 2047 aa3.55□□□□□ -1.84
PDLIM1P4-201ENST00000504327 TCRBV9S1A1TA0A576 114 aa3.55□□□□□ -1.84
PDLIM1P4-201ENST00000504327 SLC22A20A6NK97 555 aa3.55□□□□□ -1.84
PDLIM1P4-201ENST00000504327 GOLGA8JA6NMD2 632 aa3.55□□□□□ -1.84
PDLIM1P4-201ENST00000504327 HIDE1A8MVS5 230 aa3.55□□□□□ -1.84
PDLIM1P4-201ENST00000504327 GOLGA8KD6RF30 607 aa3.55□□□□□ -1.84
PDLIM1P4-201ENST00000504327 ATP6V0E1O15342 81 aa3.55□□□□□ -1.84
PDLIM1P4-201ENST00000504327 CXCL13O43927 109 aa3.55□□□□□ -1.84
PDLIM1P4-201ENST00000504327 PCDH7O60245 1069 aa3.55□□□□□ -1.84
PDLIM1P4-201ENST00000504327 SOX15O60248 233 aa3.55□□□□□ -1.84
PDLIM1P4-201ENST00000504327 EIF4E2O60573 245 aaKnown RBP3.55□□□□□ -1.84
PDLIM1P4-201ENST00000504327 LMX1BO60663 402 aa3.55□□□□□ -1.84
PDLIM1P4-201ENST00000504327 RAMP1O60894 148 aa3.55□□□□□ -1.84
PDLIM1P4-201ENST00000504327 SC5DO75845 299 aa3.55□□□□□ -1.84
PDLIM1P4-201ENST00000504327 BRI3O95415 125 aa3.55□□□□□ -1.84
PDLIM1P4-201ENST00000504327 NSA2O95478 260 aaKnown RBP3.55□□□□□ -1.84
PDLIM1P4-201ENST00000504327 C1orf105O95561 183 aa3.55□□□□□ -1.84
PDLIM1P4-201ENST00000504327 RD3LP0DJH9 198 aa3.55□□□□□ -1.84
PDLIM1P4-201ENST00000504327 PSKH1P11801 424 aa3.55□□□□□ -1.84
PDLIM1P4-201ENST00000504327 POLR2EP19388 210 aaKnown RBP3.55□□□□□ -1.84
PDLIM1P4-201ENST00000504327 C4BPBP20851 252 aa3.55□□□□□ -1.84
PDLIM1P4-201ENST00000504327 MAGP20916 626 aa3.55□□□□□ -1.84
PDLIM1P4-201ENST00000504327 SAA4P35542 130 aa3.55□□□□□ -1.84
PDLIM1P4-201ENST00000504327 ARR3P36575 388 aa3.55□□□□□ -1.84
PDLIM1P4-201ENST00000504327 ID1P41134 155 aa3.55□□□□□ -1.84
PDLIM1P4-201ENST00000504327 OR3A2P47893 321 aa3.55□□□□□ -1.84
PDLIM1P4-201ENST00000504327 DNASE1L1P49184 302 aa3.55□□□□□ -1.84
PDLIM1P4-201ENST00000504327 TGM4P49221 684 aa3.55□□□□□ -1.84
PDLIM1P4-201ENST00000504327 ACOT2P49753 483 aa3.55□□□□□ -1.84
PDLIM1P4-201ENST00000504327 CCR8P51685 355 aa3.55□□□□□ -1.84
PDLIM1P4-201ENST00000504327 MLF1P58340 268 aa3.55□□□□□ -1.84
PDLIM1P4-201ENST00000504327 ARPC4P59998 168 aa3.55□□□□□ -1.84
PDLIM1P4-201ENST00000504327 UBE2MP61081 183 aaKnown RBP3.55□□□□□ -1.84
PDLIM1P4-201ENST00000504327 REEP5Q00765 189 aa3.55□□□□□ -1.84
PDLIM1P4-201ENST00000504327 SERTAD2Q14140 314 aa3.55□□□□□ -1.84
PDLIM1P4-201ENST00000504327 LAGE3Q14657 143 aa3.55□□□□□ -1.84
PDLIM1P4-201ENST00000504327 SF3A2Q15428 464 aaKnown RBP3.55□□□□□ -1.84
PDLIM1P4-201ENST00000504327 NDUFA9Q16795 377 aa3.55□□□□□ -1.84
PDLIM1P4-201ENST00000504327 EXOC3L4Q17RC7 722 aa3.55□□□□□ -1.84
PDLIM1P4-201ENST00000504327 TCEAL5Q5H9L2 206 aa3.55□□□□□ -1.84
PDLIM1P4-201ENST00000504327 SSX6Q7RTT6 188 aa3.55□□□□□ -1.84
PDLIM1P4-201ENST00000504327 CEACAM19Q7Z692 300 aa3.55□□□□□ -1.84
PDLIM1P4-201ENST00000504327 SETD3Q86TU7 594 aaPredicted RBP3.55□□□□□ -1.84
PDLIM1P4-201ENST00000504327 SLC47A2Q86VL8 602 aa3.55□□□□□ -1.84
PDLIM1P4-201ENST00000504327 IFNEQ86WN2 208 aa3.55□□□□□ -1.84
PDLIM1P4-201ENST00000504327 OR4N5Q8IXE1 308 aa3.55□□□□□ -1.84
PDLIM1P4-201ENST00000504327 BOD1L2Q8IYS8 172 aa3.55□□□□□ -1.84
PDLIM1P4-201ENST00000504327 CMTM1Q8IZ96 169 aa3.55□□□□□ -1.84
PDLIM1P4-201ENST00000504327 LINC01561Q8N1V8 128 aa3.55□□□□□ -1.84
PDLIM1P4-201ENST00000504327 MS4A15Q8N5U1 240 aa3.55□□□□□ -1.84
PDLIM1P4-201ENST00000504327 NOXO1Q8NFA2 376 aa3.55□□□□□ -1.84
PDLIM1P4-201ENST00000504327 VN1R2Q8NFZ6 395 aa3.55□□□□□ -1.84
PDLIM1P4-201ENST00000504327 TTLQ8NG68 377 aa3.55□□□□□ -1.84
PDLIM1P4-201ENST00000504327 OR2AP1Q8NGE2 309 aa3.55□□□□□ -1.84
PDLIM1P4-201ENST00000504327 OR4D10Q8NGI6 311 aa3.55□□□□□ -1.84
PDLIM1P4-201ENST00000504327 OR52H1Q8NGJ2 320 aa3.55□□□□□ -1.84
PDLIM1P4-201ENST00000504327 OR6K2Q8NGY2 324 aa3.55□□□□□ -1.84
PDLIM1P4-201ENST00000504327 IL1F10Q8WWZ1 152 aa3.55□□□□□ -1.84
PDLIM1P4-201ENST00000504327 NELFBQ8WX92 580 aa3.55□□□□□ -1.84
PDLIM1P4-201ENST00000504327 TFGQ92734 400 aaPredicted RBP3.55□□□□□ -1.84
PDLIM1P4-201ENST00000504327 CPNE4Q96A23 557 aaPredicted RBP3.55□□□□□ -1.84
PDLIM1P4-201ENST00000504327 BIRC7Q96CA5 298 aa3.55□□□□□ -1.84
PDLIM1P4-201ENST00000504327 OTUB2Q96DC9 234 aa3.55□□□□□ -1.84
PDLIM1P4-201ENST00000504327 ITCHQ96J02 903 aa3.55□□□□□ -1.84
PDLIM1P4-201ENST00000504327 OR5B2Q96R09 309 aa3.55□□□□□ -1.84
PDLIM1P4-201ENST00000504327 KCNA7Q96RP8 456 aa3.55□□□□□ -1.84
PDLIM1P4-201ENST00000504327 RNF2Q99496 336 aa3.55□□□□□ -1.84
PDLIM1P4-201ENST00000504327 TIMM29Q9BSF4 260 aa3.55□□□□□ -1.84
PDLIM1P4-201ENST00000504327 PARD6GQ9BYG4 376 aaPredicted RBP3.55□□□□□ -1.84
PDLIM1P4-201ENST00000504327 CSTL1Q9H114 145 aa3.55□□□□□ -1.84
PDLIM1P4-201ENST00000504327 ZBP1Q9H171 429 aa3.55□□□□□ -1.84
PDLIM1P4-201ENST00000504327 GLIPR2Q9H4G4 154 aa3.55□□□□□ -1.84
PDLIM1P4-201ENST00000504327 WDR55Q9H6Y2 383 aaPredicted RBP3.55□□□□□ -1.84
PDLIM1P4-201ENST00000504327 FKRPQ9H9S5 495 aa3.55□□□□□ -1.84
PDLIM1P4-201ENST00000504327 NMUR1Q9HB89 426 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms