RNA–Protein interactions for RNA: ENST00000504203.5

MATR3-233, Transcript of matrin 3, human

TSL 2 BASIC

Gene MATR3, Length 2,243 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-233	ENST00000504203	SCP2D1	Q9UJQ7	156 aa		11.64	□□□□□ -0.55
MATR3-233	ENST00000504203	OR52A1	Q9UKL2	312 aa		11.64	□□□□□ -0.55
MATR3-233	ENST00000504203	RPH3A	Q9Y2J0	694 aa	Predicted RBP	11.64	□□□□□ -0.55
MATR3-233	ENST00000504203	WDR87	Q6ZQQ6	2873 aa		11.64	□□□□□ -0.55
MATR3-233	ENST00000504203	LOC107986453	A0A1B0GWG9	222 aa		11.64	□□□□□ -0.55
MATR3-233	ENST00000504203	MEN1	O00255	615 aa		11.64	□□□□□ -0.55
MATR3-233	ENST00000504203	CYC1	P08574	325 aa		11.64	□□□□□ -0.55
MATR3-233	ENST00000504203	P2RY4	P51582	365 aa		11.64	□□□□□ -0.55
MATR3-233	ENST00000504203	BID	P55957	195 aa		11.64	□□□□□ -0.55
MATR3-233	ENST00000504203	INPP5J	Q15735	1006 aa	Predicted RBP	11.64	□□□□□ -0.55
MATR3-233	ENST00000504203	PCGF3	Q3KNV8	242 aa		11.64	□□□□□ -0.55
MATR3-233	ENST00000504203	LRFN4	Q6PJG9	635 aa		11.64	□□□□□ -0.55
MATR3-233	ENST00000504203	BPHL	Q86WA6	291 aa	Predicted RBP	11.64	□□□□□ -0.55
MATR3-233	ENST00000504203	LYPD6	Q86Y78	171 aa		11.64	□□□□□ -0.55
MATR3-233	ENST00000504203	NKX3-1	Q99801	234 aa	Predicted RBP	11.64	□□□□□ -0.55
MATR3-233	ENST00000504203	SEC22C	Q9BRL7	303 aa		11.64	□□□□□ -0.55
MATR3-233	ENST00000504203	EMC6	Q9BV81	110 aa		11.64	□□□□□ -0.55
MATR3-233	ENST00000504203	SDHAF3	Q9NRP4	125 aa		11.64	□□□□□ -0.55
MATR3-233	ENST00000504203	TAS2R8	Q9NYW2	309 aa		11.64	□□□□□ -0.55
MATR3-233	ENST00000504203	CKLF	Q9UBR5	152 aa		11.64	□□□□□ -0.55
MATR3-233	ENST00000504203	C19orf25	Q9UFG5	118 aa	Predicted RBP	11.64	□□□□□ -0.55
MATR3-233	ENST00000504203	PISD	Q9UG56	409 aa		11.64	□□□□□ -0.55
MATR3-233	ENST00000504203	CDV3	Q9UKY7	258 aa	Known RBP	11.64	□□□□□ -0.55
MATR3-233	ENST00000504203	TRAV18	A0A075B6X5	111 aa		11.63	□□□□□ -0.55
MATR3-233	ENST00000504203	TMEM269	A0A1B0GVZ9	245 aa		11.63	□□□□□ -0.55
MATR3-233	ENST00000504203	IL5	P05113	134 aa		11.63	□□□□□ -0.55
MATR3-233	ENST00000504203	CPN1	P15169	458 aa		11.63	□□□□□ -0.55
MATR3-233	ENST00000504203	HTR2C	P28335	458 aa		11.63	□□□□□ -0.55
MATR3-233	ENST00000504203	MMP16	P51512	607 aa		11.63	□□□□□ -0.55
MATR3-233	ENST00000504203	GUCA2A	Q02747	115 aa		11.63	□□□□□ -0.55
MATR3-233	ENST00000504203	CSRP2	Q16527	193 aa		11.63	□□□□□ -0.55
MATR3-233	ENST00000504203	SLC25A25	Q6KCM7	469 aa		11.63	□□□□□ -0.55
MATR3-233	ENST00000504203	CORO6	Q6QEF8	472 aa		11.63	□□□□□ -0.55
MATR3-233	ENST00000504203	NLRC3	Q7RTR2	1065 aa		11.63	□□□□□ -0.55
MATR3-233	ENST00000504203	ADPRHL1	Q8NDY3	354 aa		11.63	□□□□□ -0.55
MATR3-233	ENST00000504203	OR2M3	Q8NG83	312 aa		11.63	□□□□□ -0.55
MATR3-233	ENST00000504203	OR51A2	Q8NGJ7	313 aa		11.63	□□□□□ -0.55
MATR3-233	ENST00000504203	OR4C16	Q8NGL9	310 aa		11.63	□□□□□ -0.55
MATR3-233	ENST00000504203	SLC22A8	Q8TCC7	542 aa		11.63	□□□□□ -0.55
MATR3-233	ENST00000504203	NAT6	Q93015	286 aa		11.63	□□□□□ -0.55
MATR3-233	ENST00000504203	RASL10B	Q96S79	203 aa		11.63	□□□□□ -0.55
MATR3-233	ENST00000504203	CMKLR1	Q99788	373 aa		11.63	□□□□□ -0.55
MATR3-233	ENST00000504203	IER2	Q9BTL4	223 aa		11.63	□□□□□ -0.55
MATR3-233	ENST00000504203	METTL7A	Q9H8H3	244 aa		11.63	□□□□□ -0.55
MATR3-233	ENST00000504203	HEXA-AS1	Q9H8Q6	139 aa		11.63	□□□□□ -0.55
MATR3-233	ENST00000504203	MRPS18B	Q9Y676	258 aa	Known RBP	11.63	□□□□□ -0.55
MATR3-233	ENST00000504203	LOC101059948	A0A1B0GTJ6	334 aa		11.63	□□□□□ -0.55
MATR3-233	ENST00000504203	LOC390937	A0A1W2PQ73	354 aa		11.63	□□□□□ -0.55
MATR3-233	ENST00000504203	MEGF11	A6BM72	1044 aa		11.63	□□□□□ -0.55
MATR3-233	ENST00000504203	LDLRAD4	O15165	306 aa		11.63	□□□□□ -0.55
MATR3-233	ENST00000504203	CSF1	P09603	554 aa		11.63	□□□□□ -0.55
MATR3-233	ENST00000504203	FGF5	P12034	268 aa		11.63	□□□□□ -0.55
MATR3-233	ENST00000504203	DNASE1	P24855	282 aa		11.63	□□□□□ -0.55
MATR3-233	ENST00000504203	FAU	P35544	74 aa	Known RBP	11.63	□□□□□ -0.55
MATR3-233	ENST00000504203	GLYATL3	Q5SZD4	288 aa		11.63	□□□□□ -0.55
MATR3-233	ENST00000504203	TMEM244	Q5VVB8	128 aa		11.63	□□□□□ -0.55
MATR3-233	ENST00000504203	ZNF704	Q6ZNC4	412 aa	Predicted RBP	11.63	□□□□□ -0.55
MATR3-233	ENST00000504203	UBALD2	Q8IYN6	164 aa		11.63	□□□□□ -0.55
MATR3-233	ENST00000504203	SPIC	Q8N5J4	248 aa		11.63	□□□□□ -0.55
MATR3-233	ENST00000504203	OR6M1	Q8NGM8	313 aa		11.63	□□□□□ -0.55
MATR3-233	ENST00000504203	OR13C3	Q8NGS6	347 aa		11.63	□□□□□ -0.55
MATR3-233	ENST00000504203	ELP5	Q8TE02	316 aa		11.63	□□□□□ -0.55
MATR3-233	ENST00000504203	C11orf40	Q8WZ69	217 aa		11.63	□□□□□ -0.55
MATR3-233	ENST00000504203	SPACA9	Q96E40	222 aa	Predicted RBP	11.63	□□□□□ -0.55
MATR3-233	ENST00000504203	METTL17	Q9H7H0	456 aa	Predicted RBP	11.63	□□□□□ -0.55
MATR3-233	ENST00000504203	FAM206A	Q9NX38	181 aa		11.63	□□□□□ -0.55
MATR3-233	ENST00000504203	CYB5R1	Q9UHQ9	305 aa		11.63	□□□□□ -0.55
MATR3-233	ENST00000504203	FBXL2	Q9UKC9	423 aa		11.63	□□□□□ -0.55
MATR3-233	ENST00000504203	ELF5	Q9UKW6	265 aa	Predicted RBP	11.63	□□□□□ -0.55
MATR3-233	ENST00000504203	RHBDD3	Q9Y3P4	386 aa		11.63	□□□□□ -0.55
MATR3-233	ENST00000504203	LOC102723996	A0A087X1L8	192 aa		11.62	□□□□□ -0.55
MATR3-233	ENST00000504203	SNRPGP15	A8MWD9	76 aa		11.62	□□□□□ -0.55
MATR3-233	ENST00000504203	DOK2	O60496	412 aa		11.62	□□□□□ -0.55
MATR3-233	ENST00000504203	TPO	P07202	933 aa		11.62	□□□□□ -0.55
MATR3-233	ENST00000504203	H2BFM	P0C1H6	154 aa		11.62	□□□□□ -0.55
MATR3-233	ENST00000504203	GABRA1	P14867	456 aa		11.62	□□□□□ -0.55
MATR3-233	ENST00000504203	ANXA7	P20073	488 aa	Known RBP	11.62	□□□□□ -0.55
MATR3-233	ENST00000504203	PRSS3	P35030	304 aa		11.62	□□□□□ -0.55
MATR3-233	ENST00000504203	PER3	P56645	1201 aa		11.62	□□□□□ -0.55
MATR3-233	ENST00000504203	GPR85	P60893	370 aa		11.62	□□□□□ -0.55
MATR3-233	ENST00000504203	FOXK1	P85037	733 aa		11.62	□□□□□ -0.55
MATR3-233	ENST00000504203	SSBP1	Q04837	148 aa	Known RBP	11.62	□□□□□ -0.55
MATR3-233	ENST00000504203	LGALSL	Q3ZCW2	172 aa	Predicted RBP	11.62	□□□□□ -0.55
MATR3-233	ENST00000504203	C1orf100	Q5SVJ3	147 aa		11.62	□□□□□ -0.55
MATR3-233	ENST00000504203	ZBTB37	Q5TC79	503 aa		11.62	□□□□□ -0.55
MATR3-233	ENST00000504203	ZNF626	Q68DY1	528 aa		11.62	□□□□□ -0.55
MATR3-233	ENST00000504203	C3orf33	Q6P1S2	294 aa		11.62	□□□□□ -0.55
MATR3-233	ENST00000504203	CLEC1A	Q8NC01	280 aa		11.62	□□□□□ -0.55
MATR3-233	ENST00000504203	OR4D10	Q8NGI6	311 aa		11.62	□□□□□ -0.55
MATR3-233	ENST00000504203	GPX8	Q8TED1	209 aa		11.62	□□□□□ -0.55
MATR3-233	ENST00000504203	RBP7	Q96R05	134 aa		11.62	□□□□□ -0.55
MATR3-233	ENST00000504203	ATG5	Q9H1Y0	275 aa		11.62	□□□□□ -0.55
MATR3-233	ENST00000504203	CGGBP1	Q9UFW8	167 aa	Predicted RBP	11.62	□□□□□ -0.55
MATR3-233	ENST00000504203	PYCARD-AS1	I3L0S3	204 aa		11.62	□□□□□ -0.55
MATR3-233	ENST00000504203	GDF9	O60383	454 aa		11.62	□□□□□ -0.55
MATR3-233	ENST00000504203	LMX1B	O60663	402 aa		11.62	□□□□□ -0.55
MATR3-233	ENST00000504203	UBC	P0CG48	685 aa	Known RBP	11.62	□□□□□ -0.55
MATR3-233	ENST00000504203	TDGF1	P13385	188 aa		11.62	□□□□□ -0.55
MATR3-233	ENST00000504203	DNASE1L1	P49184	302 aa		11.62	□□□□□ -0.55
MATR3-233	ENST00000504203	GNG2	P59768	71 aa		11.62	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms