RNA–Protein interactions for RNA: ENST00000498534.5

CNOT4-211, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 481 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-211ENST00000498534 TBCCD1Q9NVR7 557 aa10.17□□□□□ -0.78
CNOT4-211ENST00000498534 NUP50Q9UKX7 468 aa10.17□□□□□ -0.78
CNOT4-211ENST00000498534 AUP1Q9Y679 476 aa10.17□□□□□ -0.78
CNOT4-211ENST00000498534 FBP2O00757 339 aa10.16□□□□□ -0.78
CNOT4-211ENST00000498534 ABHD16AO95870 558 aa10.16□□□□□ -0.78
CNOT4-211ENST00000498534 FSHBP01225 129 aa10.16□□□□□ -0.78
CNOT4-211ENST00000498534 HKR1P10072 659 aa10.16□□□□□ -0.78
CNOT4-211ENST00000498534 ZFP36P26651 326 aaKnown RBP10.16□□□□□ -0.78
CNOT4-211ENST00000498534 KDELR2P33947 212 aa10.16□□□□□ -0.78
CNOT4-211ENST00000498534 SELENOWP63302 87 aa10.16□□□□□ -0.78
CNOT4-211ENST00000498534 ZNF154Q13106 437 aa10.16□□□□□ -0.78
CNOT4-211ENST00000498534 OAFQ86UD1 273 aa10.16□□□□□ -0.78
CNOT4-211ENST00000498534 LRRC28Q86X40 367 aaPredicted RBP10.16□□□□□ -0.78
CNOT4-211ENST00000498534 SIGLECL1Q8N7X8 197 aa10.16□□□□□ -0.78
CNOT4-211ENST00000498534 NPEPL1Q8NDH3 523 aa10.16□□□□□ -0.78
CNOT4-211ENST00000498534 OR2Z1Q8NG97 314 aa10.16□□□□□ -0.78
CNOT4-211ENST00000498534 OR51A7Q8NH64 312 aa10.16□□□□□ -0.78
CNOT4-211ENST00000498534 LZICQ8WZA0 190 aa10.16□□□□□ -0.78
CNOT4-211ENST00000498534 DVL3Q92997 716 aaPredicted RBP10.16□□□□□ -0.78
CNOT4-211ENST00000498534 COG8Q96MW5 612 aa10.16□□□□□ -0.78
CNOT4-211ENST00000498534 MRI1Q9BV20 369 aa10.16□□□□□ -0.78
CNOT4-211ENST00000498534 PATZ1Q9HBE1 687 aaKnown RBP10.16□□□□□ -0.78
CNOT4-211ENST00000498534 MMP26Q9NRE1 261 aa10.16□□□□□ -0.78
CNOT4-211ENST00000498534 GID8Q9NWU2 228 aa10.16□□□□□ -0.78
CNOT4-211ENST00000498534 PLEK2Q9NYT0 353 aa10.16□□□□□ -0.78
CNOT4-211ENST00000498534 PURGQ9UJV8 347 aaKnown RBP10.16□□□□□ -0.78
CNOT4-211ENST00000498534 PPP1R3CQ9UQK1 317 aa10.16□□□□□ -0.78
CNOT4-211ENST00000498534 PCDHGB1Q9Y5G3 927 aa10.16□□□□□ -0.78
CNOT4-211ENST00000498534 MEGF8Q7Z7M0 2845 aa10.15□□□□□ -0.78
CNOT4-211ENST00000498534 EFCAB9A8MZ26 197 aa10.15□□□□□ -0.78
CNOT4-211ENST00000498534 HMGB1P1B2RPK0 211 aaPredicted RBP10.15□□□□□ -0.78
CNOT4-211ENST00000498534 AHCYL1O43865 530 aa10.15□□□□□ -0.78
CNOT4-211ENST00000498534 IGHV2-70P01814 119 aa10.15□□□□□ -0.78
CNOT4-211ENST00000498534 IGHMP01871 453 aa10.15□□□□□ -0.78
CNOT4-211ENST00000498534 COX5BP10606 129 aa10.15□□□□□ -0.78
CNOT4-211ENST00000498534 PRTN3P24158 256 aa10.15□□□□□ -0.78
CNOT4-211ENST00000498534 SLC6A9P48067 706 aa10.15□□□□□ -0.78
CNOT4-211ENST00000498534 SCRN3Q0VDG4 424 aa10.15□□□□□ -0.78
CNOT4-211ENST00000498534 BAMBIQ13145 260 aa10.15□□□□□ -0.78
CNOT4-211ENST00000498534 TMEM155Q4W5P6 130 aa10.15□□□□□ -0.78
CNOT4-211ENST00000498534 LRRC23Q53EV4 343 aaPredicted RBP10.15□□□□□ -0.78
CNOT4-211ENST00000498534 SPRNQ5BIV9 151 aa10.15□□□□□ -0.78
CNOT4-211ENST00000498534 TTMPQ5BVD1 217 aa10.15□□□□□ -0.78
CNOT4-211ENST00000498534 COQ5Q5HYK3 327 aa10.15□□□□□ -0.78
CNOT4-211ENST00000498534 TMEM255AQ5JRV8 349 aa10.15□□□□□ -0.78
CNOT4-211ENST00000498534 FOXL2NBQ6ZUU3 175 aa10.15□□□□□ -0.78
CNOT4-211ENST00000498534 DOK3Q7L591 496 aa10.15□□□□□ -0.78
CNOT4-211ENST00000498534 IGFN1Q86VF2 1251 aa10.15□□□□□ -0.78
CNOT4-211ENST00000498534 ZNF283Q8N7M2 679 aa10.15□□□□□ -0.78
CNOT4-211ENST00000498534 CLDN22Q8N7P3 220 aa10.15□□□□□ -0.78
CNOT4-211ENST00000498534 ZNF511Q8NB15 262 aa10.15□□□□□ -0.78
CNOT4-211ENST00000498534 PCYOX1LQ8NBM8 494 aa10.15□□□□□ -0.78
CNOT4-211ENST00000498534 DEFB108BQ8NET1 73 aa10.15□□□□□ -0.78
CNOT4-211ENST00000498534 PTP4A1Q93096 173 aa10.15□□□□□ -0.78
CNOT4-211ENST00000498534 CMBLQ96DG6 245 aa10.15□□□□□ -0.78
CNOT4-211ENST00000498534 PRRC1Q96M27 445 aa10.15□□□□□ -0.78
CNOT4-211ENST00000498534 ZNF583Q96ND8 569 aa10.15□□□□□ -0.78
CNOT4-211ENST00000498534 FNDC11Q9BVV2 318 aa10.15□□□□□ -0.78
CNOT4-211ENST00000498534 ZMAT3Q9HA38 289 aaKnown RBP10.15□□□□□ -0.78
CNOT4-211ENST00000498534 GRHPRQ9UBQ7 328 aa10.15□□□□□ -0.78
CNOT4-211ENST00000498534 IL19Q9UHD0 177 aa10.15□□□□□ -0.78
CNOT4-211ENST00000498534 POLR3KQ9Y2Y1 108 aaPredicted RBP10.15□□□□□ -0.78
CNOT4-211ENST00000498534 BBIP1A8MTZ0 92 aa10.14□□□□□ -0.79
CNOT4-211ENST00000498534 TRAPPC2LH3BP13 241 aa10.14□□□□□ -0.79
CNOT4-211ENST00000498534 IFNL4K9M1U5 179 aa10.14□□□□□ -0.79
CNOT4-211ENST00000498534 XKRYO14609 159 aa10.14□□□□□ -0.79
CNOT4-211ENST00000498534 MRASO14807 208 aa10.14□□□□□ -0.79
CNOT4-211ENST00000498534 SGCEO43556 437 aa10.14□□□□□ -0.79
CNOT4-211ENST00000498534 PIP5K1CO60331 668 aa10.14□□□□□ -0.79
CNOT4-211ENST00000498534 EDF1O60869 148 aaKnown RBP10.14□□□□□ -0.79
CNOT4-211ENST00000498534 KITLGP21583 273 aa10.14□□□□□ -0.79
CNOT4-211ENST00000498534 RPL4P36578 427 aaKnown RBP10.14□□□□□ -0.79
CNOT4-211ENST00000498534 HTR5AP47898 357 aa10.14□□□□□ -0.79
CNOT4-211ENST00000498534 SLC9A3P48764 834 aa10.14□□□□□ -0.79
CNOT4-211ENST00000498534 BTG1P62324 171 aa10.14□□□□□ -0.79
CNOT4-211ENST00000498534 PRKCDQ05655 676 aa10.14□□□□□ -0.79
CNOT4-211ENST00000498534 ENDOGQ14249 297 aaKnown RBP10.14□□□□□ -0.79
CNOT4-211ENST00000498534 TRAM2Q15035 370 aa10.14□□□□□ -0.79
CNOT4-211ENST00000498534 MAPRE2Q15555 327 aa10.14□□□□□ -0.79
CNOT4-211ENST00000498534 ESCO2Q56NI9 601 aa10.14□□□□□ -0.79
CNOT4-211ENST00000498534 SLC27A4Q6P1M0 643 aa10.14□□□□□ -0.79
CNOT4-211ENST00000498534 RRM2BQ7LG56 351 aa10.14□□□□□ -0.79
CNOT4-211ENST00000498534 NRMQ8IXM6 262 aa10.14□□□□□ -0.79
CNOT4-211ENST00000498534 MICU2Q8IYU8 434 aa10.14□□□□□ -0.79
CNOT4-211ENST00000498534 RNF113BQ8IZP6 322 aaKnown RBP10.14□□□□□ -0.79
CNOT4-211ENST00000498534 OR2T12Q8NG77 320 aa10.14□□□□□ -0.79
CNOT4-211ENST00000498534 SLC25A28Q96A46 364 aa10.14□□□□□ -0.79
CNOT4-211ENST00000498534 HAVCR1Q96D42 359 aa10.14□□□□□ -0.79
CNOT4-211ENST00000498534 NDEL1Q9GZM8 345 aa10.14□□□□□ -0.79
CNOT4-211ENST00000498534 MS4A7Q9GZW8 240 aaPredicted RBP10.14□□□□□ -0.79
CNOT4-211ENST00000498534 ZNF696Q9H7X3 374 aa10.14□□□□□ -0.79
CNOT4-211ENST00000498534 POLE4Q9NR33 117 aa10.14□□□□□ -0.79
CNOT4-211ENST00000498534 DCAF16Q9NXF7 216 aa10.14□□□□□ -0.79
CNOT4-211ENST00000498534 ZNF69Q9UC07 566 aa10.14□□□□□ -0.79
CNOT4-211ENST00000498534 OR5V1Q9UGF6 321 aa10.14□□□□□ -0.79
CNOT4-211ENST00000498534 A4GNTQ9UNA3 340 aa10.14□□□□□ -0.79
CNOT4-211ENST00000498534 STARD10Q9Y365 291 aa10.14□□□□□ -0.79
CNOT4-211ENST00000498534 INSIG2Q9Y5U4 225 aa10.14□□□□□ -0.79
CNOT4-211ENST00000498534 TRAV27A0A087WT01 109 aa10.13□□□□□ -0.79
CNOT4-211ENST00000498534 LOC100653049A0A140TA62 436 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms