RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 GPX4P36969 197 aaPredicted RBP2.82□□□□□ -1.96
VPS36-206ENST00000497149 ZNF138P52744 262 aa2.82□□□□□ -1.96
VPS36-206ENST00000497149 BLVRAP53004 296 aa2.82□□□□□ -1.96
VPS36-206ENST00000497149 SPAG1Q07617 926 aa2.82□□□□□ -1.96
VPS36-206ENST00000497149 SRSF5Q13243 272 aaKnown RBP2.82□□□□□ -1.96
VPS36-206ENST00000497149 IDI1Q13907 227 aa2.82□□□□□ -1.96
VPS36-206ENST00000497149 THEM4Q5T1C6 240 aa2.82□□□□□ -1.96
VPS36-206ENST00000497149 PRAMEF20Q5VT98 475 aa2.82□□□□□ -1.96
VPS36-206ENST00000497149 C9orf135Q5VTT2 229 aa2.82□□□□□ -1.96
VPS36-206ENST00000497149 TTC19Q6DKK2 380 aaPredicted RBP2.82□□□□□ -1.96
VPS36-206ENST00000497149 ARL9Q6T311 187 aa2.82□□□□□ -1.96
VPS36-206ENST00000497149 PRELID2Q8N945 189 aa2.82□□□□□ -1.96
VPS36-206ENST00000497149 OR5B3Q8NH48 314 aa2.82□□□□□ -1.96
VPS36-206ENST00000497149 ZNF681Q96N22 645 aa2.82□□□□□ -1.96
VPS36-206ENST00000497149 HAUS4Q9H6D7 363 aa2.82□□□□□ -1.96
VPS36-206ENST00000497149 ANKRA2Q9H9E1 313 aa2.82□□□□□ -1.96
VPS36-206ENST00000497149 UVRAGQ9P2Y5 699 aa2.82□□□□□ -1.96
VPS36-206ENST00000497149 LGALS13Q9UHV8 139 aa2.82□□□□□ -1.96
VPS36-206ENST00000497149 PITPNC1Q9UKF7 332 aa2.82□□□□□ -1.96
VPS36-206ENST00000497149 PSME2Q9UL46 239 aa2.82□□□□□ -1.96
VPS36-206ENST00000497149 YTHDF2Q9Y5A9 579 aaKnown RBP2.82□□□□□ -1.96
VPS36-206ENST00000497149 NSD2O96028 1365 aa2.82□□□□□ -1.96
VPS36-206ENST00000497149 SLIT3O75094 1523 aa2.82□□□□□ -1.96
VPS36-206ENST00000497149 COL4A4P53420 1690 aaPredicted RBP2.82□□□□□ -1.96
VPS36-206ENST00000497149 IGHV5-10-1A0A0J9YXX1 117 aa2.81□□□□□ -1.96
VPS36-206ENST00000497149 TRBV11-1A0A0K0K1C0 115 aa2.81□□□□□ -1.96
VPS36-206ENST00000497149 ERLIN1O75477 346 aa2.81□□□□□ -1.96
VPS36-206ENST00000497149 RP2O75695 350 aa2.81□□□□□ -1.96
VPS36-206ENST00000497149 SLC25A14O95258 325 aaPredicted RBP2.81□□□□□ -1.96
VPS36-206ENST00000497149 NPPAP01160 153 aa2.81□□□□□ -1.96
VPS36-206ENST00000497149 FTH1P02794 183 aa2.81□□□□□ -1.96
VPS36-206ENST00000497149 POLR2MP0CAP2 368 aa2.81□□□□□ -1.96
VPS36-206ENST00000497149 OR5H8P0DN80 308 aa2.81□□□□□ -1.96
VPS36-206ENST00000497149 MAP3K7CLP57077 242 aa2.81□□□□□ -1.96
VPS36-206ENST00000497149 KRTAP10-8P60410 259 aa2.81□□□□□ -1.96
VPS36-206ENST00000497149 ARG2P78540 354 aa2.81□□□□□ -1.96
VPS36-206ENST00000497149 PON2Q15165 354 aa2.81□□□□□ -1.96
VPS36-206ENST00000497149 RGNQ15493 299 aa2.81□□□□□ -1.96
VPS36-206ENST00000497149 CHRNA6Q15825 494 aa2.81□□□□□ -1.96
VPS36-206ENST00000497149 HADHQ16836 314 aaKnown RBP2.81□□□□□ -1.96
VPS36-206ENST00000497149 SOHLH1Q5JUK2 328 aa2.81□□□□□ -1.96
VPS36-206ENST00000497149 PPM1LQ5SGD2 360 aa2.81□□□□□ -1.96
VPS36-206ENST00000497149 CARD17Q5XLA6 110 aa2.81□□□□□ -1.96
VPS36-206ENST00000497149 LRRC66Q68CR7 880 aa2.81□□□□□ -1.96
VPS36-206ENST00000497149 REEP3Q6NUK4 255 aa2.81□□□□□ -1.96
VPS36-206ENST00000497149 BBS5Q8N3I7 341 aa2.81□□□□□ -1.96
VPS36-206ENST00000497149 ABHD3Q8WU67 409 aa2.81□□□□□ -1.96
VPS36-206ENST00000497149 SLC38A4Q969I6 547 aa2.81□□□□□ -1.96
VPS36-206ENST00000497149 TM4SF18Q96CE8 201 aa2.81□□□□□ -1.96
VPS36-206ENST00000497149 C19orf60Q96EN9 201 aa2.81□□□□□ -1.96
VPS36-206ENST00000497149 PDXPQ96GD0 296 aa2.81□□□□□ -1.96
VPS36-206ENST00000497149 ARL5BQ96KC2 179 aa2.81□□□□□ -1.96
VPS36-206ENST00000497149 NEUROG2Q9H2A3 272 aa2.81□□□□□ -1.96
VPS36-206ENST00000497149 ZNF430Q9H8G1 570 aaPredicted RBP2.81□□□□□ -1.96
VPS36-206ENST00000497149 FAM49BQ9NUQ9 324 aa2.81□□□□□ -1.96
VPS36-206ENST00000497149 IGSF9BQ9UPX0 1349 aa2.81□□□□□ -1.96
VPS36-206ENST00000497149 MYO10Q9HD67 2058 aa2.8□□□□□ -1.96
VPS36-206ENST00000497149 UNC13AQ9UPW8 1703 aa2.8□□□□□ -1.96
VPS36-206ENST00000497149 GOLGA6L7A0A1B0GV03 622 aa2.8□□□□□ -1.96
VPS36-206ENST00000497149 NDUFS8O00217 210 aa2.8□□□□□ -1.96
VPS36-206ENST00000497149 NUPL2O15504 423 aaKnown RBP2.8□□□□□ -1.96
VPS36-206ENST00000497149 FLOT1O75955 427 aa2.8□□□□□ -1.96
VPS36-206ENST00000497149 MRPL3P09001 348 aaKnown RBP2.8□□□□□ -1.96
VPS36-206ENST00000497149 IGHV1-8P0DP01 117 aa2.8□□□□□ -1.96
VPS36-206ENST00000497149 PSMC3P17980 439 aa2.8□□□□□ -1.96
VPS36-206ENST00000497149 F2RP25116 425 aa2.8□□□□□ -1.96
VPS36-206ENST00000497149 RRM2P31350 389 aa2.8□□□□□ -1.96
VPS36-206ENST00000497149 NUP62P37198 522 aaPredicted RBP2.8□□□□□ -1.96
VPS36-206ENST00000497149 RND2P52198 227 aa2.8□□□□□ -1.96
VPS36-206ENST00000497149 ESRRGP62508 458 aa2.8□□□□□ -1.96
VPS36-206ENST00000497149 SARNPP82979 210 aaKnown RBP2.8□□□□□ -1.96
VPS36-206ENST00000497149 STK11Q15831 433 aa2.8□□□□□ -1.96
VPS36-206ENST00000497149 NANOGP8Q6NSW7 305 aa2.8□□□□□ -1.96
VPS36-206ENST00000497149 CEMP1Q6PRD7 247 aaPredicted RBP2.8□□□□□ -1.96
VPS36-206ENST00000497149 PLET1Q6UQ28 207 aa2.8□□□□□ -1.96
VPS36-206ENST00000497149 FBXW12Q6X9E4 464 aa2.8□□□□□ -1.96
VPS36-206ENST00000497149 ABHD12BQ7Z5M8 362 aaPredicted RBP2.8□□□□□ -1.96
VPS36-206ENST00000497149 IQCKQ8N0W5 287 aa2.8□□□□□ -1.96
VPS36-206ENST00000497149 LRRC45Q96CN5 670 aa2.8□□□□□ -1.96
VPS36-206ENST00000497149 SEH1LQ96EE3 360 aa2.8□□□□□ -1.96
VPS36-206ENST00000497149 OR5B12Q96R08 314 aa2.8□□□□□ -1.96
VPS36-206ENST00000497149 C8orf33Q9H7E9 229 aaPredicted RBP2.8□□□□□ -1.96
VPS36-206ENST00000497149 SYNDIG1Q9H7V2 258 aa2.8□□□□□ -1.96
VPS36-206ENST00000497149 UBE2ZQ9H832 354 aaPredicted RBP2.8□□□□□ -1.96
VPS36-206ENST00000497149 C12orf10Q9HB07 376 aa2.8□□□□□ -1.96
VPS36-206ENST00000497149 HMG20AQ9NP66 347 aa2.8□□□□□ -1.96
VPS36-206ENST00000497149 RPRD1BQ9NQG5 326 aaKnown RBP2.8□□□□□ -1.96
VPS36-206ENST00000497149 HRASLS2Q9NWW9 162 aa2.8□□□□□ -1.96
VPS36-206ENST00000497149 UBAP1Q9NZ09 502 aa2.8□□□□□ -1.96
VPS36-206ENST00000497149 GAKO14976 1311 aa2.79□□□□□ -1.96
VPS36-206ENST00000497149 WDR19Q8NEZ3 1342 aa2.79□□□□□ -1.96
VPS36-206ENST00000497149 IGLV1-50A0A075B6I6 118 aa2.79□□□□□ -1.96
VPS36-206ENST00000497149 OR2AG2A6NM03 316 aa2.79□□□□□ -1.96
VPS36-206ENST00000497149 F8VZ95 297 aa2.79□□□□□ -1.96
VPS36-206ENST00000497149 SIRPB1O00241 398 aa2.79□□□□□ -1.96
VPS36-206ENST00000497149 LSM1O15116 133 aaKnown RBP2.79□□□□□ -1.96
VPS36-206ENST00000497149 B4GALT5O43286 388 aa2.79□□□□□ -1.96
VPS36-206ENST00000497149 ACSM4P0C7M7 580 aa2.79□□□□□ -1.96
VPS36-206ENST00000497149 CISD3P0C7P0 127 aa2.79□□□□□ -1.96
VPS36-206ENST00000497149 DCKP27707 260 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms