RNA–Protein interactions for RNA: ENST00000494014.1

EPHA3-203, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 3,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-203ENST00000494014 ACTBL2Q562R1 376 aa6.39□□□□□ -1.39
EPHA3-203ENST00000494014 TXNDC8Q6A555 127 aa6.39□□□□□ -1.39
EPHA3-203ENST00000494014 CDPF1Q6NVV7 123 aa6.39□□□□□ -1.39
EPHA3-203ENST00000494014 ZNF585AQ6P3V2 769 aa6.39□□□□□ -1.39
EPHA3-203ENST00000494014 ARHGAP11AQ6P4F7 1023 aa6.39□□□□□ -1.39
EPHA3-203ENST00000494014 LRRTM4Q86VH4 590 aa6.39□□□□□ -1.39
EPHA3-203ENST00000494014 TMPRSS12Q86WS5 348 aa6.39□□□□□ -1.39
EPHA3-203ENST00000494014 ZDHHC22Q8N966 263 aa6.39□□□□□ -1.39
EPHA3-203ENST00000494014 ZNF480Q8WV37 535 aa6.39□□□□□ -1.39
EPHA3-203ENST00000494014 GALNT14Q96FL9 552 aa6.39□□□□□ -1.39
EPHA3-203ENST00000494014 RBM18Q96H35 190 aaKnown RBP6.39□□□□□ -1.39
EPHA3-203ENST00000494014 SPACA7Q96KW9 195 aa6.39□□□□□ -1.39
EPHA3-203ENST00000494014 KLF16Q9BXK1 252 aaPredicted RBP6.39□□□□□ -1.39
EPHA3-203ENST00000494014 ZNF223Q9UK11 482 aaPredicted RBP6.39□□□□□ -1.39
EPHA3-203ENST00000494014 ICAM5Q9UMF0 924 aa6.39□□□□□ -1.39
EPHA3-203ENST00000494014 MDC1Q14676 2089 aaKnown RBP6.38□□□□□ -1.39
EPHA3-203ENST00000494014 TRAV18A0A075B6X5 111 aa6.38□□□□□ -1.39
EPHA3-203ENST00000494014 TSPAN11A1L157 253 aa6.38□□□□□ -1.39
EPHA3-203ENST00000494014 TBC1D3BA6NDS4 549 aa6.38□□□□□ -1.39
EPHA3-203ENST00000494014 PLPP1O14494 284 aa6.38□□□□□ -1.39
EPHA3-203ENST00000494014 HEXBP07686 556 aa6.38□□□□□ -1.39
EPHA3-203ENST00000494014 TBC1D3HP0C7X1 549 aa6.38□□□□□ -1.39
EPHA3-203ENST00000494014 ADH6P28332 368 aa6.38□□□□□ -1.39
EPHA3-203ENST00000494014 LPAR6P43657 344 aa6.38□□□□□ -1.39
EPHA3-203ENST00000494014 TRA2BP62995 288 aaKnown RBP6.38□□□□□ -1.39
EPHA3-203ENST00000494014 TGM3Q08188 693 aa6.38□□□□□ -1.39
EPHA3-203ENST00000494014 KHDRBS2Q5VWX1 349 aaKnown RBP6.38□□□□□ -1.39
EPHA3-203ENST00000494014 TBC1D3GQ6DHY5 549 aa6.38□□□□□ -1.39
EPHA3-203ENST00000494014 FRRS1Q6ZNA5 592 aa6.38□□□□□ -1.39
EPHA3-203ENST00000494014 DCXRQ7Z4W1 244 aa6.38□□□□□ -1.39
EPHA3-203ENST00000494014 HMGN2P46Q86SG4 172 aa6.38□□□□□ -1.39
EPHA3-203ENST00000494014 VRK2Q86Y07 508 aa6.38□□□□□ -1.39
EPHA3-203ENST00000494014 OR2L13Q8N349 312 aa6.38□□□□□ -1.39
EPHA3-203ENST00000494014 ACOT4Q8N9L9 421 aa6.38□□□□□ -1.39
EPHA3-203ENST00000494014 ZNF610Q8N9Z0 462 aa6.38□□□□□ -1.39
EPHA3-203ENST00000494014 CCDC54Q8NEL0 328 aa6.38□□□□□ -1.39
EPHA3-203ENST00000494014 OR2L5Q8NG80 312 aa6.38□□□□□ -1.39
EPHA3-203ENST00000494014 OR13D1Q8NGV5 346 aa6.38□□□□□ -1.39
EPHA3-203ENST00000494014 OR8S1Q8NH09 359 aa6.38□□□□□ -1.39
EPHA3-203ENST00000494014 LYPD6BQ8NI32 183 aa6.38□□□□□ -1.39
EPHA3-203ENST00000494014 SECTM1Q8WVN6 248 aa6.38□□□□□ -1.39
EPHA3-203ENST00000494014 KLK6Q92876 244 aa6.38□□□□□ -1.39
EPHA3-203ENST00000494014 IP6K3Q96PC2 410 aa6.38□□□□□ -1.39
EPHA3-203ENST00000494014 PRRT1Q99946 306 aa6.38□□□□□ -1.39
EPHA3-203ENST00000494014 SPOCK3Q9BQ16 436 aa6.38□□□□□ -1.39
EPHA3-203ENST00000494014 CNTNAP3Q9BZ76 1288 aa6.38□□□□□ -1.39
EPHA3-203ENST00000494014 ZNF350Q9GZX5 532 aa6.38□□□□□ -1.39
EPHA3-203ENST00000494014 OR52A5Q9H2C5 316 aa6.38□□□□□ -1.39
EPHA3-203ENST00000494014 PTGES2Q9H7Z7 377 aa6.38□□□□□ -1.39
EPHA3-203ENST00000494014 CAPN10Q9HC96 672 aa6.38□□□□□ -1.39
EPHA3-203ENST00000494014 CUTCQ9NTM9 273 aa6.38□□□□□ -1.39
EPHA3-203ENST00000494014 SLC2A8Q9NY64 477 aa6.38□□□□□ -1.39
EPHA3-203ENST00000494014 MBD1Q9UIS9 605 aaPredicted RBP6.38□□□□□ -1.39
EPHA3-203ENST00000494014 KCNG2Q9UJ96 466 aa6.38□□□□□ -1.39
EPHA3-203ENST00000494014 PILRBQ9UKJ0 227 aa6.38□□□□□ -1.39
EPHA3-203ENST00000494014 SLC7A7Q9UM01 511 aa6.38□□□□□ -1.39
EPHA3-203ENST00000494014 GPR55Q9Y2T6 319 aaPredicted RBP6.38□□□□□ -1.39
EPHA3-203ENST00000494014 PPIL1Q9Y3C6 166 aa6.38□□□□□ -1.39
EPHA3-203ENST00000494014 NUP210LQ5VU65 1888 aa6.38□□□□□ -1.39
EPHA3-203ENST00000494014 OR5H15A6NDH6 313 aa6.38□□□□□ -1.39
EPHA3-203ENST00000494014 OR5H1A6NKK0 313 aa6.38□□□□□ -1.39
EPHA3-203ENST00000494014 ZNF432O94892 652 aa6.38□□□□□ -1.39
EPHA3-203ENST00000494014 NTN1O95631 604 aa6.38□□□□□ -1.39
EPHA3-203ENST00000494014 PTBP3O95758 552 aaKnown RBP6.38□□□□□ -1.39
EPHA3-203ENST00000494014 PMP2P02689 132 aa6.38□□□□□ -1.39
EPHA3-203ENST00000494014 THY1P04216 161 aa6.38□□□□□ -1.39
EPHA3-203ENST00000494014 SPARCP09486 303 aa6.38□□□□□ -1.39
EPHA3-203ENST00000494014 ADH5P11766 374 aa6.38□□□□□ -1.39
EPHA3-203ENST00000494014 LYL1P12980 280 aa6.38□□□□□ -1.39
EPHA3-203ENST00000494014 FGF7P21781 194 aa6.38□□□□□ -1.39
EPHA3-203ENST00000494014 BSGP35613 385 aa6.38□□□□□ -1.39
EPHA3-203ENST00000494014 MAP3K8P41279 467 aa6.38□□□□□ -1.39
EPHA3-203ENST00000494014 RPS10P46783 165 aaKnown RBP6.38□□□□□ -1.39
EPHA3-203ENST00000494014 SGSHP51688 502 aa6.38□□□□□ -1.39
EPHA3-203ENST00000494014 TAS2R38P59533 333 aa6.38□□□□□ -1.39
EPHA3-203ENST00000494014 GUCA2AQ02747 115 aa6.38□□□□□ -1.39
EPHA3-203ENST00000494014 TNFRSF9Q07011 255 aa6.38□□□□□ -1.39
EPHA3-203ENST00000494014 TGIF1Q15583 401 aa6.38□□□□□ -1.39
EPHA3-203ENST00000494014 SPNS3Q6ZMD2 512 aa6.38□□□□□ -1.39
EPHA3-203ENST00000494014 ZNF574Q6ZN55 896 aaPredicted RBP6.38□□□□□ -1.39
EPHA3-203ENST00000494014 OLIG3Q7RTU3 272 aa6.38□□□□□ -1.39
EPHA3-203ENST00000494014 FRMD1Q8N878 549 aa6.38□□□□□ -1.39
EPHA3-203ENST00000494014 TSTD1Q8NFU3 115 aa6.38□□□□□ -1.39
EPHA3-203ENST00000494014 CADM4Q8NFZ8 388 aa6.38□□□□□ -1.39
EPHA3-203ENST00000494014 OR9A4Q8NGU2 314 aa6.38□□□□□ -1.39
EPHA3-203ENST00000494014 ZNF417Q8TAU3 575 aa6.38□□□□□ -1.39
EPHA3-203ENST00000494014 M1APQ8TC57 530 aa6.38□□□□□ -1.39
EPHA3-203ENST00000494014 CA5BP1Q8WTZ4 195 aa6.38□□□□□ -1.39
EPHA3-203ENST00000494014 THRSPQ92748 146 aa6.38□□□□□ -1.39
EPHA3-203ENST00000494014 AMDHD1Q96NU7 426 aa6.38□□□□□ -1.39
EPHA3-203ENST00000494014 AQP10Q96PS8 301 aa6.38□□□□□ -1.39
EPHA3-203ENST00000494014 GLIPR2Q9H4G4 154 aa6.38□□□□□ -1.39
EPHA3-203ENST00000494014 DNAJB11Q9UBS4 358 aa6.38□□□□□ -1.39
EPHA3-203ENST00000494014 ADAM29Q9UKF5 820 aa6.38□□□□□ -1.39
EPHA3-203ENST00000494014 SLC5A10A0PJK1 596 aa6.37□□□□□ -1.39
EPHA3-203ENST00000494014 ZNF726A6NNF4 738 aa6.37□□□□□ -1.39
EPHA3-203ENST00000494014 C9JQL5 133 aa6.37□□□□□ -1.39
EPHA3-203ENST00000494014 TACR3P29371 465 aa6.37□□□□□ -1.39
EPHA3-203ENST00000494014 SPINT3P49223 89 aa6.37□□□□□ -1.39
EPHA3-203ENST00000494014 HNRNPKP61978 463 aaKnown RBP eCLIP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms