RNA–Protein interactions for RNA: ENST00000493601.5

PTPRU-208, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 695 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-208ENST00000493601 POU5F2Q8N7G0 328 aa14.08□□□□□ -0.16
PTPRU-208ENST00000493601 NANPQ8TBE9 248 aa14.08□□□□□ -0.16
PTPRU-208ENST00000493601 ST7LQ8TDW4 575 aa14.08□□□□□ -0.16
PTPRU-208ENST00000493601 FAM216AQ8WUB2 273 aa14.08□□□□□ -0.16
PTPRU-208ENST00000493601 RBM4Q9BWF3 364 aaKnown RBP14.08□□□□□ -0.16
PTPRU-208ENST00000493601 MSL2Q9HCI7 577 aa14.08□□□□□ -0.16
PTPRU-208ENST00000493601 TUBG2Q9NRH3 451 aa14.08□□□□□ -0.16
PTPRU-208ENST00000493601 CMTM6Q9NX76 183 aa14.08□□□□□ -0.16
PTPRU-208ENST00000493601 ARMCX1Q9P291 453 aa14.08□□□□□ -0.16
PTPRU-208ENST00000493601 KLHL21Q9UJP4 597 aa14.08□□□□□ -0.16
PTPRU-208ENST00000493601 TMEM5Q9Y2B1 443 aa14.08□□□□□ -0.16
PTPRU-208ENST00000493601 A0A087WUU8 490 aa14.07□□□□□ -0.16
PTPRU-208ENST00000493601 CD14P08571 375 aa14.07□□□□□ -0.16
PTPRU-208ENST00000493601 TNFSF4P23510 183 aa14.07□□□□□ -0.16
PTPRU-208ENST00000493601 HTR5AP47898 357 aa14.07□□□□□ -0.16
PTPRU-208ENST00000493601 LIMS1P48059 325 aa14.07□□□□□ -0.16
PTPRU-208ENST00000493601 TNFAIP6P98066 277 aaPredicted RBP14.07□□□□□ -0.16
PTPRU-208ENST00000493601 LIPEQ05469 1076 aa14.07□□□□□ -0.16
PTPRU-208ENST00000493601 TMPRSS11FQ6ZWK6 438 aa14.07□□□□□ -0.16
PTPRU-208ENST00000493601 FKBP9P1Q75LS8 142 aa14.07□□□□□ -0.16
PTPRU-208ENST00000493601 CBLL1Q75N03 491 aa14.07□□□□□ -0.16
PTPRU-208ENST00000493601 RRM2BQ7LG56 351 aa14.07□□□□□ -0.16
PTPRU-208ENST00000493601 CYP4Z1Q86W10 505 aa14.07□□□□□ -0.16
PTPRU-208ENST00000493601 SLC15A3Q8IY34 581 aa14.07□□□□□ -0.16
PTPRU-208ENST00000493601 BPIFB2Q8N4F0 458 aa14.07□□□□□ -0.16
PTPRU-208ENST00000493601 RP9Q8TA86 221 aaKnown RBP14.07□□□□□ -0.16
PTPRU-208ENST00000493601 ZNF570Q96NI8 536 aa14.07□□□□□ -0.16
PTPRU-208ENST00000493601 ANKRD19PQ9H560 264 aa14.07□□□□□ -0.16
PTPRU-208ENST00000493601 EMC7Q9NPA0 242 aa14.07□□□□□ -0.16
PTPRU-208ENST00000493601 TBCCD1Q9NVR7 557 aa14.07□□□□□ -0.16
PTPRU-208ENST00000493601 UBAP1Q9NZ09 502 aa14.07□□□□□ -0.16
PTPRU-208ENST00000493601 ADAM18Q9Y3Q7 739 aa14.07□□□□□ -0.16
PTPRU-208ENST00000493601 TEX13CA0A0J9YWL9 993 aa14.06□□□□□ -0.16
PTPRU-208ENST00000493601 PRSS37A4D1T9 235 aa14.06□□□□□ -0.16
PTPRU-208ENST00000493601 CDC42EP2O14613 210 aa14.06□□□□□ -0.16
PTPRU-208ENST00000493601 SGCEO43556 437 aa14.06□□□□□ -0.16
PTPRU-208ENST00000493601 PRSS23O95084 383 aa14.06□□□□□ -0.16
PTPRU-208ENST00000493601 ADRA2CP18825 462 aa14.06□□□□□ -0.16
PTPRU-208ENST00000493601 COMPP49747 757 aaPredicted RBP14.06□□□□□ -0.16
PTPRU-208ENST00000493601 LCN2P80188 198 aa14.06□□□□□ -0.16
PTPRU-208ENST00000493601 PSG7Q13046 419 aa14.06□□□□□ -0.16
PTPRU-208ENST00000493601 CDK5R2Q13319 367 aa14.06□□□□□ -0.16
PTPRU-208ENST00000493601 AQP6Q13520 282 aa14.06□□□□□ -0.16
PTPRU-208ENST00000493601 ZBED5Q49AG3 693 aa14.06□□□□□ -0.16
PTPRU-208ENST00000493601 MESTQ5EB52 335 aa14.06□□□□□ -0.16
PTPRU-208ENST00000493601 GCDHQ92947 438 aaPredicted RBP14.06□□□□□ -0.16
PTPRU-208ENST00000493601 HSH2DQ96JZ2 352 aa14.06□□□□□ -0.16
PTPRU-208ENST00000493601 COG8Q96MW5 612 aa14.06□□□□□ -0.16
PTPRU-208ENST00000493601 SLC6A7Q99884 636 aa14.06□□□□□ -0.16
PTPRU-208ENST00000493601 C7orf69Q9H7B7 122 aa14.06□□□□□ -0.16
PTPRU-208ENST00000493601 NPTNQ9Y639 398 aa14.06□□□□□ -0.16
PTPRU-208ENST00000493601 DYSFO75923 2080 aa14.05□□□□□ -0.16
PTPRU-208ENST00000493601 PPIAL4EA0A075B759 164 aa14.05□□□□□ -0.16
PTPRU-208ENST00000493601 PPIAL4CA0A0B4J2A2 164 aa14.05□□□□□ -0.16
PTPRU-208ENST00000493601 PPIAL4DF5H284 164 aa14.05□□□□□ -0.16
PTPRU-208ENST00000493601 NME4O00746 187 aa14.05□□□□□ -0.16
PTPRU-208ENST00000493601 FOXH1O75593 365 aa14.05□□□□□ -0.16
PTPRU-208ENST00000493601 SERPINA1P01009 418 aa14.05□□□□□ -0.16
PTPRU-208ENST00000493601 IGHV2-70P01814 119 aa14.05□□□□□ -0.16
PTPRU-208ENST00000493601 SCG5P05408 212 aa14.05□□□□□ -0.16
PTPRU-208ENST00000493601 PPIAL4FP0DN26 164 aa14.05□□□□□ -0.16
PTPRU-208ENST00000493601 TNFRSF1AP19438 455 aa14.05□□□□□ -0.16
PTPRU-208ENST00000493601 SLC7A2P52569 658 aa14.05□□□□□ -0.16
PTPRU-208ENST00000493601 KRR1Q13601 381 aaKnown RBP14.05□□□□□ -0.16
PTPRU-208ENST00000493601 TBPL2Q6SJ96 375 aa14.05□□□□□ -0.16
PTPRU-208ENST00000493601 VASH1Q7L8A9 365 aaPredicted RBP14.05□□□□□ -0.16
PTPRU-208ENST00000493601 FAM122BQ7Z309 247 aa14.05□□□□□ -0.16
PTPRU-208ENST00000493601 KLHL36Q8N4N3 616 aa14.05□□□□□ -0.16
PTPRU-208ENST00000493601 SPICQ8N5J4 248 aa14.05□□□□□ -0.16
PTPRU-208ENST00000493601 OR2Z1Q8NG97 314 aa14.05□□□□□ -0.16
PTPRU-208ENST00000493601 ZMYND19Q96E35 227 aaPredicted RBP14.05□□□□□ -0.16
PTPRU-208ENST00000493601 Q96M85 177 aa14.05□□□□□ -0.16
PTPRU-208ENST00000493601 HOPXQ9BPY8 73 aaPredicted RBP14.05□□□□□ -0.16
PTPRU-208ENST00000493601 TMEM106BQ9NUM4 274 aa14.05□□□□□ -0.16
PTPRU-208ENST00000493601 PLEK2Q9NYT0 353 aa14.05□□□□□ -0.16
PTPRU-208ENST00000493601 GMPR2Q9P2T1 348 aaKnown RBP14.05□□□□□ -0.16
PTPRU-208ENST00000493601 PURGQ9UJV8 347 aaKnown RBP14.05□□□□□ -0.16
PTPRU-208ENST00000493601 NDUFAB1O14561 156 aa14.04□□□□□ -0.16
PTPRU-208ENST00000493601 COX4I1P13073 169 aa14.04□□□□□ -0.16
PTPRU-208ENST00000493601 CTLA4P16410 223 aa14.04□□□□□ -0.16
PTPRU-208ENST00000493601 ZNF26P17031 533 aaPredicted RBP14.04□□□□□ -0.16
PTPRU-208ENST00000493601 KITLGP21583 273 aa14.04□□□□□ -0.16
PTPRU-208ENST00000493601 SDHAP31040 664 aa14.04□□□□□ -0.16
PTPRU-208ENST00000493601 SPRNQ5BIV9 151 aa14.04□□□□□ -0.16
PTPRU-208ENST00000493601 GPR139Q6DWJ6 353 aa14.04□□□□□ -0.16
PTPRU-208ENST00000493601 GLB1L2Q8IW92 636 aa14.04□□□□□ -0.16
PTPRU-208ENST00000493601 C3orf56Q8N813 242 aa14.04□□□□□ -0.16
PTPRU-208ENST00000493601 FAM162AQ96A26 154 aa14.04□□□□□ -0.16
PTPRU-208ENST00000493601 SAMD8Q96LT4 415 aa14.04□□□□□ -0.16
PTPRU-208ENST00000493601 KCTD14Q9BQ13 255 aaPredicted RBP14.04□□□□□ -0.16
PTPRU-208ENST00000493601 POFUT1Q9H488 388 aa14.04□□□□□ -0.16
PTPRU-208ENST00000493601 CCDC134Q9H6E4 229 aa14.04□□□□□ -0.16
PTPRU-208ENST00000493601 NMNAT1Q9HAN9 279 aaPredicted RBP14.04□□□□□ -0.16
PTPRU-208ENST00000493601 OPN4Q9UHM6 478 aa14.04□□□□□ -0.16
PTPRU-208ENST00000493601 ENPP4Q9Y6X5 453 aa14.04□□□□□ -0.16
PTPRU-208ENST00000493601 A0A1W2PRQ8 180 aa14.03□□□□□ -0.16
PTPRU-208ENST00000493601 TMEM89A2RUT3 159 aa14.03□□□□□ -0.16
PTPRU-208ENST00000493601 J3QW42 95 aa14.03□□□□□ -0.16
PTPRU-208ENST00000493601 SURF4O15260 269 aa14.03□□□□□ -0.16
PTPRU-208ENST00000493601 NDUFB2O95178 105 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms