RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 A0A1B0GX12 115 aa11.65□□□□□ -0.54
SHOX2-205ENST00000490689 TMEM218A2RU14 115 aa11.65□□□□□ -0.54
SHOX2-205ENST00000490689 GSTZ1O43708 216 aaPredicted RBP11.65□□□□□ -0.54
SHOX2-205ENST00000490689 LRP3O75074 770 aa11.65□□□□□ -0.54
SHOX2-205ENST00000490689 OLFM2O95897 454 aa11.65□□□□□ -0.54
SHOX2-205ENST00000490689 ZNF16P17020 682 aaPredicted RBP11.65□□□□□ -0.54
SHOX2-205ENST00000490689 SFTPDP35247 375 aa11.65□□□□□ -0.54
SHOX2-205ENST00000490689 NANOS3P60323 173 aaKnown RBP11.65□□□□□ -0.54
SHOX2-205ENST00000490689 KIAA0141Q14154 515 aaPredicted RBP11.65□□□□□ -0.54
SHOX2-205ENST00000490689 GPR157Q5UAW9 335 aa11.65□□□□□ -0.54
SHOX2-205ENST00000490689 LPCAT3Q6P1A2 487 aa11.65□□□□□ -0.54
SHOX2-205ENST00000490689 LINC00518Q8N0U6 118 aa11.65□□□□□ -0.54
SHOX2-205ENST00000490689 GVQW1Q8N7I0 195 aa11.65□□□□□ -0.54
SHOX2-205ENST00000490689 ARL5BQ96KC2 179 aa11.65□□□□□ -0.54
SHOX2-205ENST00000490689 STACQ99469 402 aa11.65□□□□□ -0.54
SHOX2-205ENST00000490689 RSRP1Q9BUV0 290 aa11.65□□□□□ -0.54
SHOX2-205ENST00000490689 EMC6Q9BV81 110 aa11.65□□□□□ -0.54
SHOX2-205ENST00000490689 LHX9Q9NQ69 397 aa11.65□□□□□ -0.54
SHOX2-205ENST00000490689 SERINC1Q9NRX5 453 aa11.65□□□□□ -0.54
SHOX2-205ENST00000490689 A0A0J9YY10 115 aa11.65□□□□□ -0.54
SHOX2-205ENST00000490689 SLC35E2P0CK97 266 aa11.65□□□□□ -0.54
SHOX2-205ENST00000490689 SPP1P10451 314 aa11.65□□□□□ -0.54
SHOX2-205ENST00000490689 GJA4P35212 333 aa11.65□□□□□ -0.54
SHOX2-205ENST00000490689 HNF4GQ14541 408 aa11.65□□□□□ -0.54
SHOX2-205ENST00000490689 FAM189A2Q15884 450 aa11.65□□□□□ -0.54
SHOX2-205ENST00000490689 SOHLH1Q5JUK2 328 aa11.65□□□□□ -0.54
SHOX2-205ENST00000490689 ISOC2Q96AB3 205 aa11.65□□□□□ -0.54
SHOX2-205ENST00000490689 TMEM59Q9BXS4 323 aa11.65□□□□□ -0.54
SHOX2-205ENST00000490689 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.65□□□□□ -0.54
SHOX2-205ENST00000490689 ZMIZ1Q9ULJ6 1067 aa11.65□□□□□ -0.54
SHOX2-205ENST00000490689 MRPS2Q9Y399 296 aaKnown RBP11.65□□□□□ -0.54
SHOX2-205ENST00000490689 TPRP12270 2363 aaKnown RBP11.65□□□□□ -0.54
SHOX2-205ENST00000490689 ZNF705GA8MUZ8 300 aaPredicted RBP11.64□□□□□ -0.55
SHOX2-205ENST00000490689 OGG1O15527 345 aa11.64□□□□□ -0.55
SHOX2-205ENST00000490689 HSPA12AO43301 675 aa11.64□□□□□ -0.55
SHOX2-205ENST00000490689 DAOP14920 347 aa11.64□□□□□ -0.55
SHOX2-205ENST00000490689 CCNOP22674 350 aa11.64□□□□□ -0.55
SHOX2-205ENST00000490689 S100PP25815 95 aa11.64□□□□□ -0.55
SHOX2-205ENST00000490689 S100GP29377 79 aa11.64□□□□□ -0.55
SHOX2-205ENST00000490689 ZNF93P35789 620 aaPredicted RBP11.64□□□□□ -0.55
SHOX2-205ENST00000490689 CASRP41180 1078 aa11.64□□□□□ -0.55
SHOX2-205ENST00000490689 RIN1Q13671 783 aa11.64□□□□□ -0.55
SHOX2-205ENST00000490689 WDR38Q5JTN6 314 aa11.64□□□□□ -0.55
SHOX2-205ENST00000490689 ZPLD1Q8TCW7 415 aa11.64□□□□□ -0.55
SHOX2-205ENST00000490689 TMEM234Q8WY98 164 aa11.64□□□□□ -0.55
SHOX2-205ENST00000490689 OR11A1Q9GZK7 315 aa11.64□□□□□ -0.55
SHOX2-205ENST00000490689 ZBP1Q9H171 429 aa11.64□□□□□ -0.55
SHOX2-205ENST00000490689 SLCO5A1Q9H2Y9 848 aa11.64□□□□□ -0.55
SHOX2-205ENST00000490689 METTL7AQ9H8H3 244 aa11.64□□□□□ -0.55
SHOX2-205ENST00000490689 FLRT3Q9NZU0 649 aa11.64□□□□□ -0.55
SHOX2-205ENST00000490689 OR52A1Q9UKL2 312 aa11.64□□□□□ -0.55
SHOX2-205ENST00000490689 TDRD15B5MCY1 1934 aaKnown RBP11.64□□□□□ -0.55
SHOX2-205ENST00000490689 OTOFQ9HC10 1997 aa11.64□□□□□ -0.55
SHOX2-205ENST00000490689 ALOX12BO75342 701 aa11.64□□□□□ -0.55
SHOX2-205ENST00000490689 CRYBA1P05813 215 aa11.64□□□□□ -0.55
SHOX2-205ENST00000490689 NFYBP25208 207 aa11.64□□□□□ -0.55
SHOX2-205ENST00000490689 TSFMP43897 325 aaKnown RBP11.64□□□□□ -0.55
SHOX2-205ENST00000490689 UBXN2BQ14CS0 331 aa11.64□□□□□ -0.55
SHOX2-205ENST00000490689 PPA1Q15181 289 aa11.64□□□□□ -0.55
SHOX2-205ENST00000490689 Q6ZSR6 202 aa11.64□□□□□ -0.55
SHOX2-205ENST00000490689 OR6K3Q8NGY3 331 aa11.64□□□□□ -0.55
SHOX2-205ENST00000490689 ASB17Q8WXJ9 295 aa11.64□□□□□ -0.55
SHOX2-205ENST00000490689 PGLYRP3Q96LB9 341 aa11.64□□□□□ -0.55
SHOX2-205ENST00000490689 JAM3Q9BX67 310 aa11.64□□□□□ -0.55
SHOX2-205ENST00000490689 LUZP4Q9P127 313 aa11.64□□□□□ -0.55
SHOX2-205ENST00000490689 ST6GALNAC2Q9UJ37 374 aa11.64□□□□□ -0.55
SHOX2-205ENST00000490689 UBE2J1Q9Y385 318 aaPredicted RBP11.64□□□□□ -0.55
SHOX2-205ENST00000490689 WIF1Q9Y5W5 379 aa11.64□□□□□ -0.55
SHOX2-205ENST00000490689 TET1Q8NFU7 2136 aa11.64□□□□□ -0.55
SHOX2-205ENST00000490689 AKR7A3O95154 331 aa11.64□□□□□ -0.55
SHOX2-205ENST00000490689 BLVRBP30043 206 aaPredicted RBP11.64□□□□□ -0.55
SHOX2-205ENST00000490689 BTCP35070 178 aa11.64□□□□□ -0.55
SHOX2-205ENST00000490689 ZNF136P52737 540 aa11.64□□□□□ -0.55
SHOX2-205ENST00000490689 MESP2Q0VG99 397 aa11.64□□□□□ -0.55
SHOX2-205ENST00000490689 ACKR1Q16570 336 aa11.64□□□□□ -0.55
SHOX2-205ENST00000490689 LYG2Q86SG7 212 aa11.64□□□□□ -0.55
SHOX2-205ENST00000490689 MARVELD3Q96A59 401 aa11.64□□□□□ -0.55
SHOX2-205ENST00000490689 MRPS28Q9Y2Q9 187 aaKnown RBP11.64□□□□□ -0.55
SHOX2-205ENST00000490689 RNF215Q9Y6U7 377 aa11.64□□□□□ -0.55
SHOX2-205ENST00000490689 CTSVO60911 334 aa11.64□□□□□ -0.55
SHOX2-205ENST00000490689 DNAJB6O75190 326 aa11.64□□□□□ -0.55
SHOX2-205ENST00000490689 HNRNPA1P09651 372 aaKnown RBP eCLIP11.64□□□□□ -0.55
SHOX2-205ENST00000490689 NTSR1P30989 418 aa11.64□□□□□ -0.55
SHOX2-205ENST00000490689 FABP9Q0Z7S8 132 aa11.64□□□□□ -0.55
SHOX2-205ENST00000490689 ANKRD16Q6P6B7 361 aa11.64□□□□□ -0.55
SHOX2-205ENST00000490689 OR2L13Q8N349 312 aa11.64□□□□□ -0.55
SHOX2-205ENST00000490689 HOXB13Q92826 284 aaPredicted RBP11.64□□□□□ -0.55
SHOX2-205ENST00000490689 HHIPQ96QV1 700 aa11.64□□□□□ -0.55
SHOX2-205ENST00000490689 FAM212BQ9NTI7 297 aaPredicted RBP11.64□□□□□ -0.55
SHOX2-205ENST00000490689 SLC17A2O00624 439 aa11.63□□□□□ -0.55
SHOX2-205ENST00000490689 EPPINO95925 133 aa11.63□□□□□ -0.55
SHOX2-205ENST00000490689 CT62P0C5K7 136 aa11.63□□□□□ -0.55
SHOX2-205ENST00000490689 BLKP51451 505 aa11.63□□□□□ -0.55
SHOX2-205ENST00000490689 EEF1A1P68104 462 aaKnown RBP11.63□□□□□ -0.55
SHOX2-205ENST00000490689 GLIPR1L1Q6UWM5 242 aa11.63□□□□□ -0.55
SHOX2-205ENST00000490689 PUSL1Q8N0Z8 303 aaKnown RBP11.63□□□□□ -0.55
SHOX2-205ENST00000490689 SUMF1Q8NBK3 374 aa11.63□□□□□ -0.55
SHOX2-205ENST00000490689 OR4D6Q8NGJ1 314 aa11.63□□□□□ -0.55
SHOX2-205ENST00000490689 SLC25A38Q96DW6 304 aa11.63□□□□□ -0.55
SHOX2-205ENST00000490689 KIR3DX1Q9H7L2 352 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms